RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 NID1P14543 1247 aa25.21■■□□□ 1.63
CBX4-202ENST00000448310 TSC22D1Q15714 1073 aa25.21■■□□□ 1.63
CBX4-202ENST00000448310 ATP6AP1LQ52LC2 224 aa25.21■■□□□ 1.63
CBX4-202ENST00000448310 KLHL26Q53HC5 615 aa25.21■■□□□ 1.63
CBX4-202ENST00000448310 IL23RQ5VWK5 629 aa25.21■■□□□ 1.63
CBX4-202ENST00000448310 GTF2IRD2BQ6EKJ0 949 aa25.21■■□□□ 1.63
CBX4-202ENST00000448310 NUFIP2Q7Z417 695 aaKnown RBP25.21■■□□□ 1.63
CBX4-202ENST00000448310 MTERF4Q7Z6M4 381 aaKnown RBP25.21■■□□□ 1.63
CBX4-202ENST00000448310 GTF2IRD2Q86UP8 949 aa25.21■■□□□ 1.63
CBX4-202ENST00000448310 OR56A1Q8NGH5 318 aa25.21■■□□□ 1.63
CBX4-202ENST00000448310 FAF1Q9UNN5 650 aaPredicted RBP25.21■■□□□ 1.63
CBX4-202ENST00000448310 GPR52Q9Y2T5 361 aa25.21■■□□□ 1.63
CBX4-202ENST00000448310 ZNF195O14628 629 aa25.2■■□□□ 1.62
CBX4-202ENST00000448310 PSMB1P20618 241 aaKnown RBP25.2■■□□□ 1.62
CBX4-202ENST00000448310 ELK4P28324 431 aa25.2■■□□□ 1.62
CBX4-202ENST00000448310 P2RX1P51575 399 aa25.2■■□□□ 1.62
CBX4-202ENST00000448310 NR1H2P55055 460 aa25.2■■□□□ 1.62
CBX4-202ENST00000448310 C6orf136Q5SQH8 315 aa25.2■■□□□ 1.62
CBX4-202ENST00000448310 TUSC5Q8IXB3 177 aa25.2■■□□□ 1.62
CBX4-202ENST00000448310 ZNF614Q8N883 585 aa25.2■■□□□ 1.62
CBX4-202ENST00000448310 FNDC5Q8NAU1 212 aa25.2■■□□□ 1.62
CBX4-202ENST00000448310 ZNF527Q8NB42 609 aa25.2■■□□□ 1.62
CBX4-202ENST00000448310 OR5AK3PQ8NH89 298 aa25.2■■□□□ 1.62
CBX4-202ENST00000448310 PSMA8Q8TAA3 256 aa25.2■■□□□ 1.62
CBX4-202ENST00000448310 TCP10LQ8TDR4 215 aa25.2■■□□□ 1.62
CBX4-202ENST00000448310 S100PBPQ96BU1 408 aa25.2■■□□□ 1.62
CBX4-202ENST00000448310 ZNF524Q96C55 264 aa25.2■■□□□ 1.62
CBX4-202ENST00000448310 REXO5Q96IC2 774 aaKnown RBP25.2■■□□□ 1.62
CBX4-202ENST00000448310 ANKZF1Q9H8Y5 726 aa25.2■■□□□ 1.62
CBX4-202ENST00000448310 ZDHHC2Q9UIJ5 367 aa25.2■■□□□ 1.62
CBX4-202ENST00000448310 DNHD1Q96M86 4753 aa25.19■■□□□ 1.62
CBX4-202ENST00000448310 TMEM176BQ3YBM2 270 aaPredicted RBP25.19■■□□□ 1.62
CBX4-202ENST00000448310 TMEM201Q5SNT2 666 aa25.19■■□□□ 1.62
CBX4-202ENST00000448310 RFWD2Q8NHY2 731 aa25.19■■□□□ 1.62
CBX4-202ENST00000448310 TMEM171Q8WVE6 324 aa25.19■■□□□ 1.62
CBX4-202ENST00000448310 CPNE4Q96A23 557 aaPredicted RBP25.19■■□□□ 1.62
CBX4-202ENST00000448310 TMEM204Q9BSN7 226 aa25.19■■□□□ 1.62
CBX4-202ENST00000448310 HOXD1Q9GZZ0 328 aa25.19■■□□□ 1.62
CBX4-202ENST00000448310 COQ10BQ9H8M1 238 aa25.19■■□□□ 1.62
CBX4-202ENST00000448310 GTPBP1O00178 669 aaKnown RBP25.18■■□□□ 1.62
CBX4-202ENST00000448310 GCM2O75603 506 aaPredicted RBP25.18■■□□□ 1.62
CBX4-202ENST00000448310 PABPC4LP0CB38 370 aaKnown RBP25.18■■□□□ 1.62
CBX4-202ENST00000448310 ATP12AP54707 1039 aa25.18■■□□□ 1.62
CBX4-202ENST00000448310 TFAP2EQ6VUC0 442 aa25.18■■□□□ 1.62
CBX4-202ENST00000448310 HOMEZQ8IX15 550 aa25.18■■□□□ 1.62
CBX4-202ENST00000448310 OR5D16Q8NGK9 328 aa25.18■■□□□ 1.62
CBX4-202ENST00000448310 GPR119Q8TDV5 335 aa25.18■■□□□ 1.62
CBX4-202ENST00000448310 COQ8BQ96D53 544 aa25.18■■□□□ 1.62
CBX4-202ENST00000448310 OR10A4Q9H209 315 aa25.18■■□□□ 1.62
CBX4-202ENST00000448310 TIGARQ9NQ88 270 aa25.18■■□□□ 1.62
CBX4-202ENST00000448310 ATAD3AQ9NVI7 634 aa25.18■■□□□ 1.62
CBX4-202ENST00000448310 KLHL13Q9P2N7 655 aa25.18■■□□□ 1.62
CBX4-202ENST00000448310 ACTL7BQ9Y614 415 aa25.18■■□□□ 1.62
CBX4-202ENST00000448310 GPC6Q9Y625 555 aaPredicted RBP25.18■■□□□ 1.62
CBX4-202ENST00000448310 NPIPB9F8W1W9 429 aa25.17■■□□□ 1.62
CBX4-202ENST00000448310 H3BNH8 94 aa25.17■■□□□ 1.62
CBX4-202ENST00000448310 HS3ST1O14792 307 aa25.17■■□□□ 1.62
CBX4-202ENST00000448310 CFLARO15519 480 aa25.17■■□□□ 1.62
CBX4-202ENST00000448310 LYPLA1O75608 230 aaPredicted RBP25.17■■□□□ 1.62
CBX4-202ENST00000448310 CNOT4O95628 575 aaKnown RBP25.17■■□□□ 1.62
CBX4-202ENST00000448310 PRKCAP17252 672 aa25.17■■□□□ 1.62
CBX4-202ENST00000448310 ADH6P28332 368 aa25.17■■□□□ 1.62
CBX4-202ENST00000448310 PCSK6P29122 969 aa25.17■■□□□ 1.62
CBX4-202ENST00000448310 SUMO3P55854 103 aaPredicted RBP25.17■■□□□ 1.62
CBX4-202ENST00000448310 RPS26P62854 115 aaKnown RBP25.17■■□□□ 1.62
CBX4-202ENST00000448310 RNPS1Q15287 305 aaKnown RBP25.17■■□□□ 1.62
CBX4-202ENST00000448310 LSM12Q3MHD2 195 aaKnown RBP25.17■■□□□ 1.62
CBX4-202ENST00000448310 FCRLAQ7L513 359 aa25.17■■□□□ 1.62
CBX4-202ENST00000448310 GABRG1Q8N1C3 465 aa25.17■■□□□ 1.62
CBX4-202ENST00000448310 RIBC1Q8N443 379 aaPredicted RBP25.17■■□□□ 1.62
CBX4-202ENST00000448310 TMCO5AQ8N6Q1 288 aa25.17■■□□□ 1.62
CBX4-202ENST00000448310 RAB3IL1Q8TBN0 382 aa25.17■■□□□ 1.62
CBX4-202ENST00000448310 SFXN5Q8TD22 340 aa25.17■■□□□ 1.62
CBX4-202ENST00000448310 AKAP1Q92667 903 aaKnown RBP eCLIP25.17■■□□□ 1.62
CBX4-202ENST00000448310 OR7D2Q96RA2 312 aa25.17■■□□□ 1.62
CBX4-202ENST00000448310 DTNAQ9Y4J8 743 aa25.17■■□□□ 1.62
CBX4-202ENST00000448310 HIVEP2P31629 2446 aa25.16■■□□□ 1.62
CBX4-202ENST00000448310 IGHV3-15A0A0B4J1V0 119 aa25.16■■□□□ 1.62
CBX4-202ENST00000448310 KRT16P08779 473 aa25.16■■□□□ 1.62
CBX4-202ENST00000448310 CREB1P16220 341 aa25.16■■□□□ 1.62
CBX4-202ENST00000448310 SOAT1P35610 550 aa25.16■■□□□ 1.62
CBX4-202ENST00000448310 ZNF619Q8N2I2 560 aa25.16■■□□□ 1.62
CBX4-202ENST00000448310 ZNF611Q8N823 705 aa25.16■■□□□ 1.62
CBX4-202ENST00000448310 STEAP2Q8NFT2 490 aa25.16■■□□□ 1.62
CBX4-202ENST00000448310 ZFP90Q8TF47 636 aa25.16■■□□□ 1.62
CBX4-202ENST00000448310 TUBGCP3Q96CW5 907 aa25.16■■□□□ 1.62
CBX4-202ENST00000448310 LGALS13Q9UHV8 139 aa25.16■■□□□ 1.62
CBX4-202ENST00000448310 A0A1W2PNR3 127 aa25.15■■□□□ 1.62
CBX4-202ENST00000448310 GJE1A6NN92 205 aa25.15■■□□□ 1.62
CBX4-202ENST00000448310 ENPP1P22413 925 aa25.15■■□□□ 1.62
CBX4-202ENST00000448310 CCR4P51679 360 aa25.15■■□□□ 1.62
CBX4-202ENST00000448310 HBA1P69905 142 aa25.15■■□□□ 1.62
CBX4-202ENST00000448310 OLIG3Q7RTU3 272 aa25.15■■□□□ 1.62
CBX4-202ENST00000448310 RIMKLAQ8IXN7 391 aa25.15■■□□□ 1.62
CBX4-202ENST00000448310 CLEC4FQ8N1N0 589 aa25.15■■□□□ 1.62
CBX4-202ENST00000448310 NATD1Q8N6N6 113 aa25.15■■□□□ 1.62
CBX4-202ENST00000448310 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP25.15■■□□□ 1.62
CBX4-202ENST00000448310 PRPF18Q99633 342 aaKnown RBP25.15■■□□□ 1.62
CBX4-202ENST00000448310 TACO1Q9BSH4 297 aaKnown RBP25.15■■□□□ 1.62
CBX4-202ENST00000448310 DUSP26Q9BV47 211 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms