RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 MAPK9P45984 424 aa17.91■□□□□ 0.46
HMGA1-205ENST00000447654 P2RY4P51582 365 aa17.91■□□□□ 0.46
HMGA1-205ENST00000447654 COX20Q5RI15 118 aa17.91■□□□□ 0.46
HMGA1-205ENST00000447654 MANEAQ5SRI9 462 aa17.91■□□□□ 0.46
HMGA1-205ENST00000447654 CXorf57Q6NSI4 855 aaKnown RBP17.91■□□□□ 0.46
HMGA1-205ENST00000447654 ANKRD33Q7Z3H0 272 aa17.91■□□□□ 0.46
HMGA1-205ENST00000447654 ARL6IP6Q8N6S5 226 aa17.91■□□□□ 0.46
HMGA1-205ENST00000447654 GPR156Q8NFN8 814 aa17.91■□□□□ 0.46
HMGA1-205ENST00000447654 MS4A4EQ96PG1 132 aa17.91■□□□□ 0.46
HMGA1-205ENST00000447654 CIPCQ9C0C6 399 aa17.91■□□□□ 0.46
HMGA1-205ENST00000447654 EGLN1Q9GZT9 426 aa17.91■□□□□ 0.46
HMGA1-205ENST00000447654 RNF208Q9H0X6 261 aa17.91■□□□□ 0.46
HMGA1-205ENST00000447654 TREM2Q9NZC2 230 aa17.91■□□□□ 0.46
HMGA1-205ENST00000447654 YIPF1Q9Y548 306 aa17.91■□□□□ 0.46
HMGA1-205ENST00000447654 SLC9B1P1A6NJY1 282 aa17.9■□□□□ 0.46
HMGA1-205ENST00000447654 MCIDASD6RGH6 385 aa17.9■□□□□ 0.46
HMGA1-205ENST00000447654 GFYI3L273 518 aa17.9■□□□□ 0.46
HMGA1-205ENST00000447654 KDELR3O43731 214 aa17.9■□□□□ 0.46
HMGA1-205ENST00000447654 F11P03951 625 aa17.9■□□□□ 0.46
HMGA1-205ENST00000447654 IDSP22304 550 aa17.9■□□□□ 0.46
HMGA1-205ENST00000447654 E2F1Q01094 437 aa17.9■□□□□ 0.46
HMGA1-205ENST00000447654 IL10RAQ13651 578 aa17.9■□□□□ 0.46
HMGA1-205ENST00000447654 OLFML2AQ68BL7 652 aa17.9■□□□□ 0.46
HMGA1-205ENST00000447654 IL20RBQ6UXL0 311 aa17.9■□□□□ 0.46
HMGA1-205ENST00000447654 B3GLCTQ6Y288 498 aa17.9■□□□□ 0.46
HMGA1-205ENST00000447654 SLC39A5Q6ZMH5 540 aa17.9■□□□□ 0.46
HMGA1-205ENST00000447654 IQCF1Q8N6M8 205 aa17.9■□□□□ 0.46
HMGA1-205ENST00000447654 TMEM185AQ8NFB2 350 aa17.9■□□□□ 0.46
HMGA1-205ENST00000447654 PKP4Q99569 1192 aa17.9■□□□□ 0.46
HMGA1-205ENST00000447654 KLF16Q9BXK1 252 aaPredicted RBP17.9■□□□□ 0.46
HMGA1-205ENST00000447654 STOX2Q9P2F5 926 aaPredicted RBP17.9■□□□□ 0.46
HMGA1-205ENST00000447654 VPS29Q9UBQ0 182 aa17.9■□□□□ 0.46
HMGA1-205ENST00000447654 FBXW2Q9UKT8 454 aa17.9■□□□□ 0.46
HMGA1-205ENST00000447654 PCDHGC4Q9Y5F7 938 aa17.9■□□□□ 0.46
HMGA1-205ENST00000447654 FXYD6-FXYD2A0A087WZ82 144 aa17.9■□□□□ 0.46
HMGA1-205ENST00000447654 A0A0G2JK05 382 aa17.9■□□□□ 0.46
HMGA1-205ENST00000447654 UBE2QL1A1L167 161 aa17.9■□□□□ 0.46
HMGA1-205ENST00000447654 HSD3B2P26439 372 aa17.9■□□□□ 0.46
HMGA1-205ENST00000447654 HTR2AP28223 471 aa17.9■□□□□ 0.46
HMGA1-205ENST00000447654 MNDAP41218 407 aa17.9■□□□□ 0.46
HMGA1-205ENST00000447654 RAD52P43351 418 aa17.9■□□□□ 0.46
HMGA1-205ENST00000447654 FNTBP49356 437 aa17.9■□□□□ 0.46
HMGA1-205ENST00000447654 CCR8P51685 355 aa17.9■□□□□ 0.46
HMGA1-205ENST00000447654 ARF5P84085 180 aa17.9■□□□□ 0.46
HMGA1-205ENST00000447654 ENTPD8Q5MY95 495 aa17.9■□□□□ 0.46
HMGA1-205ENST00000447654 ACSM5Q6NUN0 579 aa17.9■□□□□ 0.46
HMGA1-205ENST00000447654 CDC73Q6P1J9 531 aa17.9■□□□□ 0.46
HMGA1-205ENST00000447654 RHOUQ7L0Q8 258 aa17.9■□□□□ 0.46
HMGA1-205ENST00000447654 TEX19Q8NA77 164 aa17.9■□□□□ 0.46
HMGA1-205ENST00000447654 ZNF649Q9BS31 505 aa17.9■□□□□ 0.46
HMGA1-205ENST00000447654 FXYD6Q9H0Q3 95 aa17.9■□□□□ 0.46
HMGA1-205ENST00000447654 OR10A4Q9H209 315 aa17.9■□□□□ 0.46
HMGA1-205ENST00000447654 ABCG8Q9H221 673 aa17.9■□□□□ 0.46
HMGA1-205ENST00000447654 NOX3Q9HBY0 568 aa17.9■□□□□ 0.46
HMGA1-205ENST00000447654 FLVCR2Q9UPI3 526 aa17.9■□□□□ 0.46
HMGA1-205ENST00000447654 C5orf42Q9H799 3197 aa17.89■□□□□ 0.45
HMGA1-205ENST00000447654 ARPC1BO15143 372 aaKnown RBP17.89■□□□□ 0.45
HMGA1-205ENST00000447654 SIGLEC5O15389 551 aa17.89■□□□□ 0.45
HMGA1-205ENST00000447654 SPDEFO95238 335 aa17.89■□□□□ 0.45
HMGA1-205ENST00000447654 SFTPCP11686 197 aa17.89■□□□□ 0.45
HMGA1-205ENST00000447654 CD79BP40259 229 aa17.89■□□□□ 0.45
HMGA1-205ENST00000447654 ACTR1AP61163 376 aa17.89■□□□□ 0.45
HMGA1-205ENST00000447654 SIGLEC14Q08ET2 396 aa17.89■□□□□ 0.45
HMGA1-205ENST00000447654 ARHGEF7Q14155 803 aa17.89■□□□□ 0.45
HMGA1-205ENST00000447654 HABP2Q14520 560 aaPredicted RBP17.89■□□□□ 0.45
HMGA1-205ENST00000447654 ADGRF1Q5T601 910 aa17.89■□□□□ 0.45
HMGA1-205ENST00000447654 ZNF322Q6U7Q0 402 aaPredicted RBP17.89■□□□□ 0.45
HMGA1-205ENST00000447654 RBMS3Q6XE24 437 aaKnown RBP17.89■□□□□ 0.45
HMGA1-205ENST00000447654 LHFPL3Q86UP9 236 aa17.89■□□□□ 0.45
HMGA1-205ENST00000447654 ZBTB2Q8N680 514 aa17.89■□□□□ 0.45
HMGA1-205ENST00000447654 HORMAD2Q8N7B1 307 aa17.89■□□□□ 0.45
HMGA1-205ENST00000447654 PHOSPHO1Q8TCT1 267 aa17.89■□□□□ 0.45
HMGA1-205ENST00000447654 SLC35A5Q9BS91 424 aa17.89■□□□□ 0.45
HMGA1-205ENST00000447654 MFFQ9GZY8 342 aa17.89■□□□□ 0.45
HMGA1-205ENST00000447654 OPA3Q9H6K4 179 aa17.89■□□□□ 0.45
HMGA1-205ENST00000447654 ZNF629Q9UEG4 869 aaPredicted RBP17.89■□□□□ 0.45
HMGA1-205ENST00000447654 C1orf196B1AJZ1 125 aa17.89■□□□□ 0.45
HMGA1-205ENST00000447654 F5H5P2 479 aa17.89■□□□□ 0.45
HMGA1-205ENST00000447654 NRG2O14511 850 aaPredicted RBP17.89■□□□□ 0.45
HMGA1-205ENST00000447654 UGDHO60701 494 aa17.89■□□□□ 0.45
HMGA1-205ENST00000447654 CLDN11O75508 207 aa17.89■□□□□ 0.45
HMGA1-205ENST00000447654 KHDRBS3O75525 346 aaKnown RBP17.89■□□□□ 0.45
HMGA1-205ENST00000447654 SOD2P04179 222 aa17.89■□□□□ 0.45
HMGA1-205ENST00000447654 RHOCP08134 193 aa17.89■□□□□ 0.45
HMGA1-205ENST00000447654 CCL5P13501 91 aa17.89■□□□□ 0.45
HMGA1-205ENST00000447654 AGTR1P30556 359 aa17.89■□□□□ 0.45
HMGA1-205ENST00000447654 GPX4P36969 197 aaPredicted RBP17.89■□□□□ 0.45
HMGA1-205ENST00000447654 RPL3P39023 403 aaKnown RBP17.89■□□□□ 0.45
HMGA1-205ENST00000447654 DEFB103AP81534 67 aa17.89■□□□□ 0.45
HMGA1-205ENST00000447654 ACSM2AQ08AH3 577 aa17.89■□□□□ 0.45
HMGA1-205ENST00000447654 PDZK1IP1Q13113 114 aa17.89■□□□□ 0.45
HMGA1-205ENST00000447654 RNF219Q5W0B1 726 aaPredicted RBP17.89■□□□□ 0.45
HMGA1-205ENST00000447654 ACSM2BQ68CK6 577 aa17.89■□□□□ 0.45
HMGA1-205ENST00000447654 ANGPTL8Q6UXH0 198 aa17.89■□□□□ 0.45
HMGA1-205ENST00000447654 MISPQ8IVT2 679 aa17.89■□□□□ 0.45
HMGA1-205ENST00000447654 OR4F15Q8NGB8 312 aa17.89■□□□□ 0.45
HMGA1-205ENST00000447654 WFDC5Q8TCV5 224 aa17.89■□□□□ 0.45
HMGA1-205ENST00000447654 SPRYD4Q8WW59 207 aaPredicted RBP17.89■□□□□ 0.45
HMGA1-205ENST00000447654 THAP4Q8WY91 577 aa17.89■□□□□ 0.45
HMGA1-205ENST00000447654 ZNF354BQ96LW1 612 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms