RNA–Protein interactions for RNA: ENST00000447463.5

HDAC7-215, Transcript of histone deacetylase 7, human

TSL 4

Gene HDAC7, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-215	ENST00000447463	FCRLA	Q7L513	359 aa		11.74	□□□□□ -0.53
HDAC7-215	ENST00000447463	NUFIP2	Q7Z417	695 aa	Known RBP	11.74	□□□□□ -0.53
HDAC7-215	ENST00000447463	TDRP	Q86YL5	185 aa		11.74	□□□□□ -0.53
HDAC7-215	ENST00000447463	C10orf107	Q8IVU9	208 aa		11.74	□□□□□ -0.53
HDAC7-215	ENST00000447463	HOMEZ	Q8IX15	550 aa		11.74	□□□□□ -0.53
HDAC7-215	ENST00000447463	TUSC5	Q8IXB3	177 aa		11.74	□□□□□ -0.53
HDAC7-215	ENST00000447463	DDIAS	Q8IXT1	998 aa		11.74	□□□□□ -0.53
HDAC7-215	ENST00000447463	LILRB1	Q8NHL6	650 aa	Predicted RBP	11.74	□□□□□ -0.53
HDAC7-215	ENST00000447463	FBXO27	Q8NI29	283 aa		11.74	□□□□□ -0.53
HDAC7-215	ENST00000447463	HSD17B8	Q92506	261 aa		11.74	□□□□□ -0.53
HDAC7-215	ENST00000447463	CDS1	Q92903	461 aa		11.74	□□□□□ -0.53
HDAC7-215	ENST00000447463	FBXW5	Q969U6	566 aa		11.74	□□□□□ -0.53
HDAC7-215	ENST00000447463	TRMT61A	Q96FX7	289 aa	Known RBP	11.74	□□□□□ -0.53
HDAC7-215	ENST00000447463	RHOXF2	Q9BQY4	288 aa		11.74	□□□□□ -0.53
HDAC7-215	ENST00000447463	GATA5	Q9BWX5	397 aa	Predicted RBP	11.74	□□□□□ -0.53
HDAC7-215	ENST00000447463	HOXD1	Q9GZZ0	328 aa		11.74	□□□□□ -0.53
HDAC7-215	ENST00000447463	PPCS	Q9HAB8	311 aa		11.74	□□□□□ -0.53
HDAC7-215	ENST00000447463	ADAM21	Q9UKJ8	722 aa		11.74	□□□□□ -0.53
HDAC7-215	ENST00000447463	ACTL7B	Q9Y614	415 aa		11.74	□□□□□ -0.53
HDAC7-215	ENST00000447463	SVEP1	Q4LDE5	3571 aa		11.73	□□□□□ -0.53
HDAC7-215	ENST00000447463	SMIM23	A6NLE4	172 aa		11.73	□□□□□ -0.53
HDAC7-215	ENST00000447463	OVOL3	O00110	214 aa		11.73	□□□□□ -0.53
HDAC7-215	ENST00000447463	SCAMP2	O15127	329 aa	Known RBP	11.73	□□□□□ -0.53
HDAC7-215	ENST00000447463	EFNA2	O43921	213 aa		11.73	□□□□□ -0.53
HDAC7-215	ENST00000447463	TRIM13	O60858	407 aa		11.73	□□□□□ -0.53
HDAC7-215	ENST00000447463	NTN1	O95631	604 aa		11.73	□□□□□ -0.53
HDAC7-215	ENST00000447463	CD3E	P07766	207 aa		11.73	□□□□□ -0.53
HDAC7-215	ENST00000447463	YES1	P07947	543 aa		11.73	□□□□□ -0.53
HDAC7-215	ENST00000447463	SOD3	P08294	240 aa		11.73	□□□□□ -0.53
HDAC7-215	ENST00000447463	DANCR	P0C864	163 aa		11.73	□□□□□ -0.53
HDAC7-215	ENST00000447463	RPL3	P39023	403 aa	Known RBP	11.73	□□□□□ -0.53
HDAC7-215	ENST00000447463	SUMO3	P55854	103 aa	Predicted RBP	11.73	□□□□□ -0.53
HDAC7-215	ENST00000447463	PCLAF	Q15004	111 aa		11.73	□□□□□ -0.53
HDAC7-215	ENST00000447463	P2RY6	Q15077	328 aa		11.73	□□□□□ -0.53
HDAC7-215	ENST00000447463	TSC22D1	Q15714	1073 aa		11.73	□□□□□ -0.53
HDAC7-215	ENST00000447463	TAB1	Q15750	504 aa		11.73	□□□□□ -0.53
HDAC7-215	ENST00000447463	CLEC12B	Q2HXU8	276 aa		11.73	□□□□□ -0.53
HDAC7-215	ENST00000447463	TMEM176B	Q3YBM2	270 aa	Predicted RBP	11.73	□□□□□ -0.53
HDAC7-215	ENST00000447463	NCMAP	Q5T1S8	102 aa		11.73	□□□□□ -0.53
HDAC7-215	ENST00000447463	CDC73	Q6P1J9	531 aa		11.73	□□□□□ -0.53
HDAC7-215	ENST00000447463	GSPT2	Q8IYD1	628 aa	Known RBP	11.73	□□□□□ -0.53
HDAC7-215	ENST00000447463	SLC43A2	Q8N370	569 aa		11.73	□□□□□ -0.53
HDAC7-215	ENST00000447463	BANP	Q8N9N5	519 aa		11.73	□□□□□ -0.53
HDAC7-215	ENST00000447463	OR7A2P	Q8NGA2	310 aa		11.73	□□□□□ -0.53
HDAC7-215	ENST00000447463	KIF18A	Q8NI77	898 aa		11.73	□□□□□ -0.53
HDAC7-215	ENST00000447463	ADAMTS15	Q8TE58	950 aa		11.73	□□□□□ -0.53
HDAC7-215	ENST00000447463	ZFP90	Q8TF47	636 aa		11.73	□□□□□ -0.53
HDAC7-215	ENST00000447463	SMAP2	Q8WU79	429 aa	Predicted RBP	11.73	□□□□□ -0.53
HDAC7-215	ENST00000447463	TWIST2	Q8WVJ9	160 aa		11.73	□□□□□ -0.53
HDAC7-215	ENST00000447463	KISS1R	Q969F8	398 aa	Predicted RBP	11.73	□□□□□ -0.53
HDAC7-215	ENST00000447463	USB1	Q9BQ65	265 aa	Known RBP	11.73	□□□□□ -0.53
HDAC7-215	ENST00000447463	ACTRT3	Q9BYD9	372 aa		11.73	□□□□□ -0.53
HDAC7-215	ENST00000447463	ATP6V1H	Q9UI12	483 aa		11.73	□□□□□ -0.53
HDAC7-215	ENST00000447463	ICAM5	Q9UMF0	924 aa		11.73	□□□□□ -0.53
HDAC7-215	ENST00000447463	FAF1	Q9UNN5	650 aa	Predicted RBP	11.73	□□□□□ -0.53
HDAC7-215	ENST00000447463	CARD8	Q9Y2G2	431 aa		11.73	□□□□□ -0.53
HDAC7-215	ENST00000447463	NPIPA5	A0A0B4J1W7	369 aa		11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	TMEM233	B4DJY2	109 aa		11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	RNF223	E7ERA6	249 aa		11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	NPIPA7	E9PJI5	369 aa		11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	GTPBP1	O00178	669 aa	Known RBP	11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	OIP5	O43482	229 aa		11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	CRLF1	O75462	422 aa		11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	ADA	P00813	363 aa		11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	FGF4	P08620	206 aa		11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	KRT16	P08779	473 aa		11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	NPIPA8	P0DM63	369 aa		11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	PRKCA	P17252	672 aa		11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	MAPK1	P28482	360 aa		11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	SLC7A1	P30825	629 aa		11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	IDUA	P35475	653 aa		11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	CCT3	P49368	545 aa	Known RBP	11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	RNF144A	P50876	292 aa	Predicted RBP	11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	ATP12A	P54707	1039 aa		11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	BSPH1	Q075Z2	132 aa		11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	KRTAP1-1	Q07627	177 aa		11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	SELENBP1	Q13228	472 aa		11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	ITGAD	Q13349	1161 aa		11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	TP53BP2	Q13625	1128 aa		11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	VEZF1	Q14119	521 aa		11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	TOMM34	Q15785	309 aa	Predicted RBP	11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	ZNF672	Q499Z4	452 aa	Predicted RBP	11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	DCST2	Q5T1A1	773 aa		11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	CXXC5	Q7LFL8	322 aa	Known RBP	11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	C4orf33	Q8N1A6	199 aa		11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	ZNF619	Q8N2I2	560 aa		11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	ATP6V1C2	Q8NEY4	427 aa		11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	OR56A1	Q8NGH5	318 aa		11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	PSMA8	Q8TAA3	256 aa		11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	GPR119	Q8TDV5	335 aa		11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	UBLCP1	Q8WVY7	318 aa	Predicted RBP	11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	OR5P2	Q8WZ92	322 aa		11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	GTPBP3	Q969Y2	492 aa	Known RBP	11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	MRGPRX4	Q96LA9	322 aa		11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	PPP3R2	Q96LZ3	170 aa		11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	POTEKP	Q9BYX7	375 aa		11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	COQ10B	Q9H8M1	238 aa		11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	L2HGDH	Q9H9P8	463 aa		11.72	□□□□□ -0.53
HDAC7-215	ENST00000447463	ATAD3A	Q9NVI7	634 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms