RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 FBP1P09467 338 aa12.19□□□□□ -0.46
DDX56-206ENST00000446987 PRSS56P0CW18 603 aa12.19□□□□□ -0.46
DDX56-206ENST00000446987 MAPK3P27361 379 aaPredicted RBP12.19□□□□□ -0.46
DDX56-206ENST00000446987 S100A3P33764 101 aa12.19□□□□□ -0.46
DDX56-206ENST00000446987 CLDN8P56748 225 aa12.19□□□□□ -0.46
DDX56-206ENST00000446987 RPS7P62081 194 aaKnown RBP12.19□□□□□ -0.46
DDX56-206ENST00000446987 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.19□□□□□ -0.46
DDX56-206ENST00000446987 BTN2A1Q7KYR7 527 aa12.19□□□□□ -0.46
DDX56-206ENST00000446987 TRIM46Q7Z4K8 759 aa12.19□□□□□ -0.46
DDX56-206ENST00000446987 KRT77Q7Z794 578 aa12.19□□□□□ -0.46
DDX56-206ENST00000446987 LAPTM4BQ86VI4 370 aa12.19□□□□□ -0.46
DDX56-206ENST00000446987 C10orf111Q8N326 155 aa12.19□□□□□ -0.46
DDX56-206ENST00000446987 SPICQ8N5J4 248 aa12.19□□□□□ -0.46
DDX56-206ENST00000446987 OR5M9Q8NGP3 310 aa12.19□□□□□ -0.46
DDX56-206ENST00000446987 OR52P1PQ8NH57 321 aa12.19□□□□□ -0.46
DDX56-206ENST00000446987 OR1S1Q8NH92 325 aa12.19□□□□□ -0.46
DDX56-206ENST00000446987 NANPQ8TBE9 248 aa12.19□□□□□ -0.46
DDX56-206ENST00000446987 ZDHHC1Q8WTX9 485 aa12.19□□□□□ -0.46
DDX56-206ENST00000446987 TM9SF4Q92544 642 aa12.19□□□□□ -0.46
DDX56-206ENST00000446987 NARS2Q96I59 477 aaKnown RBP12.19□□□□□ -0.46
DDX56-206ENST00000446987 C19orf43Q9BQ61 176 aa12.19□□□□□ -0.46
DDX56-206ENST00000446987 THAP7Q9BT49 309 aaPredicted RBP12.19□□□□□ -0.46
DDX56-206ENST00000446987 SAP130Q9H0E3 1048 aa12.19□□□□□ -0.46
DDX56-206ENST00000446987 HDHD2Q9H0R4 259 aa12.19□□□□□ -0.46
DDX56-206ENST00000446987 PHPT1Q9NRX4 125 aaPredicted RBP12.19□□□□□ -0.46
DDX56-206ENST00000446987 NLE1Q9NVX2 485 aaPredicted RBP12.19□□□□□ -0.46
DDX56-206ENST00000446987 MED11Q9P086 117 aa12.19□□□□□ -0.46
DDX56-206ENST00000446987 SEC14L3Q9UDX4 400 aa12.19□□□□□ -0.46
DDX56-206ENST00000446987 APOBEC3BQ9UH17 382 aaKnown RBP12.19□□□□□ -0.46
DDX56-206ENST00000446987 BTNL2Q9UIR0 455 aa12.19□□□□□ -0.46
DDX56-206ENST00000446987 CNOT1A5YKK6 2376 aaKnown RBP12.19□□□□□ -0.46
DDX56-206ENST00000446987 COL27A1Q8IZC6 1860 aaPredicted RBP12.18□□□□□ -0.46
DDX56-206ENST00000446987 IRGMA1A4Y4 181 aa12.18□□□□□ -0.46
DDX56-206ENST00000446987 ARGFXA6NJG6 315 aa12.18□□□□□ -0.46
DDX56-206ENST00000446987 H7C0S8 307 aa12.18□□□□□ -0.46
DDX56-206ENST00000446987 CACNB4O00305 520 aaPredicted RBP12.18□□□□□ -0.46
DDX56-206ENST00000446987 TNFRSF10CO14798 259 aa12.18□□□□□ -0.46
DDX56-206ENST00000446987 NDUFS6O75380 124 aaKnown RBP12.18□□□□□ -0.46
DDX56-206ENST00000446987 RP2O75695 350 aa12.18□□□□□ -0.46
DDX56-206ENST00000446987 KCNK5O95279 499 aa12.18□□□□□ -0.46
DDX56-206ENST00000446987 OTCP00480 354 aa12.18□□□□□ -0.46
DDX56-206ENST00000446987 HPP00738 406 aa12.18□□□□□ -0.46
DDX56-206ENST00000446987 GIPP09681 153 aaPredicted RBP12.18□□□□□ -0.46
DDX56-206ENST00000446987 PPP3CBP16298 524 aa12.18□□□□□ -0.46
DDX56-206ENST00000446987 RAB3BP20337 219 aa12.18□□□□□ -0.46
DDX56-206ENST00000446987 RBMS1P29558 406 aaKnown RBP12.18□□□□□ -0.46
DDX56-206ENST00000446987 GABRA5P31644 462 aa12.18□□□□□ -0.46
DDX56-206ENST00000446987 ARRB1P49407 418 aaPredicted RBP12.18□□□□□ -0.46
DDX56-206ENST00000446987 HMGA2P52926 109 aa12.18□□□□□ -0.46
DDX56-206ENST00000446987 VSX2P58304 361 aaPredicted RBP12.18□□□□□ -0.46
DDX56-206ENST00000446987 RPL38P63173 70 aaKnown RBP12.18□□□□□ -0.46
DDX56-206ENST00000446987 PLIN5Q00G26 463 aa12.18□□□□□ -0.46
DDX56-206ENST00000446987 SLC14A1Q13336 389 aa12.18□□□□□ -0.46
DDX56-206ENST00000446987 PTGES3Q15185 160 aaKnown RBP12.18□□□□□ -0.46
DDX56-206ENST00000446987 OCLNQ16625 522 aa12.18□□□□□ -0.46
DDX56-206ENST00000446987 ZRANB3Q5FWF4 1079 aa12.18□□□□□ -0.46
DDX56-206ENST00000446987 DHRS7BQ6IAN0 325 aaPredicted RBP12.18□□□□□ -0.46
DDX56-206ENST00000446987 PYHIN1Q6K0P9 492 aa12.18□□□□□ -0.46
DDX56-206ENST00000446987 IKBIPQ70UQ0 350 aa12.18□□□□□ -0.46
DDX56-206ENST00000446987 VTCN1Q7Z7D3 282 aa12.18□□□□□ -0.46
DDX56-206ENST00000446987 LRRC28Q86X40 367 aaPredicted RBP12.18□□□□□ -0.46
DDX56-206ENST00000446987 OR10Q1Q8NGQ4 319 aa12.18□□□□□ -0.46
DDX56-206ENST00000446987 OR56B4Q8NH76 319 aa12.18□□□□□ -0.46
DDX56-206ENST00000446987 USP7Q93009 1102 aa12.18□□□□□ -0.46
DDX56-206ENST00000446987 GLYATL1Q969I3 302 aa12.18□□□□□ -0.46
DDX56-206ENST00000446987 DOHHQ9BU89 302 aa12.18□□□□□ -0.46
DDX56-206ENST00000446987 SEBOXQ9HB31 216 aaPredicted RBP12.18□□□□□ -0.46
DDX56-206ENST00000446987 THSD1Q9NS62 852 aa12.18□□□□□ -0.46
DDX56-206ENST00000446987 CYSLTR2Q9NS75 346 aa12.18□□□□□ -0.46
DDX56-206ENST00000446987 TAS2R13Q9NYV9 303 aa12.18□□□□□ -0.46
DDX56-206ENST00000446987 NUDT4Q9NZJ9 180 aa12.18□□□□□ -0.46
DDX56-206ENST00000446987 GPR160Q9UJ42 338 aa12.18□□□□□ -0.46
DDX56-206ENST00000446987 CDV3Q9UKY7 258 aaKnown RBP12.18□□□□□ -0.46
DDX56-206ENST00000446987 CBLCQ9ULV8 474 aa12.18□□□□□ -0.46
DDX56-206ENST00000446987 ENTPD4Q9Y227 616 aa12.18□□□□□ -0.46
DDX56-206ENST00000446987 LY6G6EA0A0G2JKS1 128 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 OR51F1A6NGY5 319 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 ZNF729A6NN14 1252 aaPredicted RBP12.17□□□□□ -0.46
DDX56-206ENST00000446987 HMSDA8MTL9 139 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 CDC7O00311 574 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 MTX2O75431 263 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 HRGP04196 525 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 SFTPCP11686 197 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 PRPS2P11908 318 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 ACPPP15309 386 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 NFYAP23511 347 aaPredicted RBP12.17□□□□□ -0.46
DDX56-206ENST00000446987 PREPP48147 710 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 HTR6P50406 440 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 RAP2BP61225 183 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 TCTE1Q5JU00 501 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 SLC25A30Q5SVS4 291 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 LIPKQ5VXJ0 399 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 ZNF425Q6IV72 752 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 DOK6Q6PKX4 331 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 RHOUQ7L0Q8 258 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 ZNF551Q7Z340 670 aaPredicted RBP12.17□□□□□ -0.46
DDX56-206ENST00000446987 PNPLA1Q8N8W4 532 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 FAM71CQ8NEG0 241 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 CCL4L1Q8NHW4 92 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 WDR20Q8TBZ3 569 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms