RNA–Protein interactions for RNA: ENST00000446764.5

GARNL3-209, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-209	ENST00000446764	FOXF1	Q12946	379 aa		18.79	■□□□□ 0.6
GARNL3-209	ENST00000446764	SKP2	Q13309	424 aa		18.79	■□□□□ 0.6
GARNL3-209	ENST00000446764	RGN	Q15493	299 aa		18.79	■□□□□ 0.6
GARNL3-209	ENST00000446764	TOMM34	Q15785	309 aa	Predicted RBP	18.79	■□□□□ 0.6
GARNL3-209	ENST00000446764	EIF3M	Q7L2H7	374 aa	Known RBP	18.79	■□□□□ 0.6
GARNL3-209	ENST00000446764	TMCO5A	Q8N6Q1	288 aa		18.79	■□□□□ 0.6
GARNL3-209	ENST00000446764	TOR1AIP2	Q8NFQ8	470 aa		18.79	■□□□□ 0.6
GARNL3-209	ENST00000446764	WNT2B	Q93097	391 aa		18.79	■□□□□ 0.6
GARNL3-209	ENST00000446764	ZNF524	Q96C55	264 aa		18.79	■□□□□ 0.6
GARNL3-209	ENST00000446764	ARSG	Q96EG1	525 aa		18.79	■□□□□ 0.6
GARNL3-209	ENST00000446764	P2RX2	Q9UBL9	471 aa		18.79	■□□□□ 0.6
GARNL3-209	ENST00000446764	ICE1	Q9Y2F5	2266 aa		18.79	■□□□□ 0.6
GARNL3-209	ENST00000446764	DNAJC13	O75165	2243 aa		18.78	■□□□□ 0.6
GARNL3-209	ENST00000446764	BCAS1	O75363	584 aa	Predicted RBP	18.78	■□□□□ 0.6
GARNL3-209	ENST00000446764	CYP7B1	O75881	506 aa		18.78	■□□□□ 0.6
GARNL3-209	ENST00000446764	TFPT	P0C1Z6	253 aa		18.78	■□□□□ 0.6
GARNL3-209	ENST00000446764	UBTFL6	P0CB48	400 aa	Predicted RBP	18.78	■□□□□ 0.6
GARNL3-209	ENST00000446764	EIF1	P41567	113 aa	Known RBP	18.78	■□□□□ 0.6
GARNL3-209	ENST00000446764	TFF3	Q07654	80 aa		18.78	■□□□□ 0.6
GARNL3-209	ENST00000446764	CBFB	Q13951	182 aa		18.78	■□□□□ 0.6
GARNL3-209	ENST00000446764	POMZP3	Q6PJE2	187 aa		18.78	■□□□□ 0.6
GARNL3-209	ENST00000446764	CHMP1B	Q7LBR1	199 aa		18.78	■□□□□ 0.6
GARNL3-209	ENST00000446764	GGN	Q86UU5	652 aa		18.78	■□□□□ 0.6
GARNL3-209	ENST00000446764	FAM71C	Q8NEG0	241 aa		18.78	■□□□□ 0.6
GARNL3-209	ENST00000446764	MTHFD2L	Q9H903	347 aa	Predicted RBP	18.78	■□□□□ 0.6
GARNL3-209	ENST00000446764	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	18.78	■□□□□ 0.6
GARNL3-209	ENST00000446764	VAPA	Q9P0L0	249 aa		18.78	■□□□□ 0.6
GARNL3-209	ENST00000446764	SLC35A3	Q9Y2D2	325 aa		18.78	■□□□□ 0.6
GARNL3-209	ENST00000446764	DIDO1	Q9BTC0	2240 aa	Known RBP	18.78	■□□□□ 0.6
GARNL3-209	ENST00000446764	TRBV5-3	A0A0A0MS03	114 aa		18.77	■□□□□ 0.6
GARNL3-209	ENST00000446764	AGAP5	A6NIR3	686 aa		18.77	■□□□□ 0.6
GARNL3-209	ENST00000446764	CLDN24	A6NM45	220 aa		18.77	■□□□□ 0.6
GARNL3-209	ENST00000446764	DNAJA2	O60884	412 aa		18.77	■□□□□ 0.6
GARNL3-209	ENST00000446764	RCBTB2	O95199	551 aa		18.77	■□□□□ 0.6
GARNL3-209	ENST00000446764	TGM6	O95932	706 aa		18.77	■□□□□ 0.6
GARNL3-209	ENST00000446764	PRKCA	P17252	672 aa		18.77	■□□□□ 0.6
GARNL3-209	ENST00000446764	IL11	P20809	199 aa		18.77	■□□□□ 0.6
GARNL3-209	ENST00000446764	ADH6	P28332	368 aa		18.77	■□□□□ 0.6
GARNL3-209	ENST00000446764	CCR4	P51679	360 aa		18.77	■□□□□ 0.6
GARNL3-209	ENST00000446764	RAC1	P63000	192 aa		18.77	■□□□□ 0.6
GARNL3-209	ENST00000446764	KCNJ10	P78508	379 aa		18.77	■□□□□ 0.6
GARNL3-209	ENST00000446764	SLC25A35	Q3KQZ1	300 aa		18.77	■□□□□ 0.6
GARNL3-209	ENST00000446764	GRAMD2A	Q8IUY3	354 aa		18.77	■□□□□ 0.6
GARNL3-209	ENST00000446764	METTL25	Q8N6Q8	603 aa		18.77	■□□□□ 0.6
GARNL3-209	ENST00000446764	FBXO27	Q8NI29	283 aa		18.77	■□□□□ 0.6
GARNL3-209	ENST00000446764	SLC38A5	Q8WUX1	472 aa		18.77	■□□□□ 0.6
GARNL3-209	ENST00000446764	PMM1	Q92871	262 aa		18.77	■□□□□ 0.6
GARNL3-209	ENST00000446764	ZNF317	Q96PQ6	595 aa	Predicted RBP	18.77	■□□□□ 0.6
GARNL3-209	ENST00000446764	TM9SF2	Q99805	663 aa		18.77	■□□□□ 0.6
GARNL3-209	ENST00000446764	THUMPD3	Q9BV44	507 aa	Known RBP	18.77	■□□□□ 0.6
GARNL3-209	ENST00000446764	RAD21L1	Q9H4I0	556 aa		18.77	■□□□□ 0.6
GARNL3-209	ENST00000446764	THUMPD1	Q9NXG2	353 aa	Known RBP	18.77	■□□□□ 0.6
GARNL3-209	ENST00000446764	STOML1	Q9UBI4	398 aa		18.77	■□□□□ 0.6
GARNL3-209	ENST00000446764	ZNF629	Q9UEG4	869 aa	Predicted RBP	18.77	■□□□□ 0.6
GARNL3-209	ENST00000446764	LEF1	Q9UJU2	399 aa	Predicted RBP	18.77	■□□□□ 0.6
GARNL3-209	ENST00000446764	NDUFAF1	Q9Y375	327 aa		18.77	■□□□□ 0.6
GARNL3-209	ENST00000446764	GPC6	Q9Y625	555 aa	Predicted RBP	18.77	■□□□□ 0.6
GARNL3-209	ENST00000446764	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		18.76	■□□□□ 0.59
GARNL3-209	ENST00000446764	NTN1	O95631	604 aa		18.76	■□□□□ 0.59
GARNL3-209	ENST00000446764	OPN1LW	P04000	364 aa		18.76	■□□□□ 0.59
GARNL3-209	ENST00000446764	BCHE	P06276	602 aa		18.76	■□□□□ 0.59
GARNL3-209	ENST00000446764	NUDT7	P0C024	238 aa		18.76	■□□□□ 0.59
GARNL3-209	ENST00000446764	BMP2	P12643	396 aa		18.76	■□□□□ 0.59
GARNL3-209	ENST00000446764	BMP5	P22003	454 aa		18.76	■□□□□ 0.59
GARNL3-209	ENST00000446764	RPS4Y1	P22090	263 aa	Known RBP	18.76	■□□□□ 0.59
GARNL3-209	ENST00000446764	CTSS	P25774	331 aa		18.76	■□□□□ 0.59
GARNL3-209	ENST00000446764	RPS3A	P61247	264 aa	Known RBP	18.76	■□□□□ 0.59
GARNL3-209	ENST00000446764	PLAUR	Q03405	335 aa		18.76	■□□□□ 0.59
GARNL3-209	ENST00000446764	FADD	Q13158	208 aa		18.76	■□□□□ 0.59
GARNL3-209	ENST00000446764	QPRT	Q15274	297 aa		18.76	■□□□□ 0.59
GARNL3-209	ENST00000446764	SLC25A53	Q5H9E4	307 aa		18.76	■□□□□ 0.59
GARNL3-209	ENST00000446764	DLEU7	Q6UYE1	221 aa		18.76	■□□□□ 0.59
GARNL3-209	ENST00000446764	RELL2	Q8NC24	303 aa	Predicted RBP	18.76	■□□□□ 0.59
GARNL3-209	ENST00000446764	TSPEAR	Q8WU66	669 aa		18.76	■□□□□ 0.59
GARNL3-209	ENST00000446764	ZNF845	Q96IR2	970 aa	Predicted RBP	18.76	■□□□□ 0.59
GARNL3-209	ENST00000446764	ADGRG7	Q96K78	797 aa		18.76	■□□□□ 0.59
GARNL3-209	ENST00000446764	PINK1	Q9BXM7	581 aa		18.76	■□□□□ 0.59
GARNL3-209	ENST00000446764	TMEM185B	Q9H7F4	350 aa		18.76	■□□□□ 0.59
GARNL3-209	ENST00000446764	NPDC1	Q9NQX5	325 aa	Predicted RBP	18.76	■□□□□ 0.59
GARNL3-209	ENST00000446764	CALML5	Q9NZT1	146 aa		18.76	■□□□□ 0.59
GARNL3-209	ENST00000446764	GMEB1	Q9Y692	573 aa		18.76	■□□□□ 0.59
GARNL3-209	ENST00000446764	UTP20	O75691	2785 aa	Known RBP	18.76	■□□□□ 0.59
GARNL3-209	ENST00000446764	NUP214	P35658	2090 aa	Predicted RBP	18.76	■□□□□ 0.59
GARNL3-209	ENST00000446764	SPTAN1	Q13813	2472 aa	Known RBP	18.76	■□□□□ 0.59
GARNL3-209	ENST00000446764	DSPP	Q9NZW4	1301 aa		18.75	■□□□□ 0.59
GARNL3-209	ENST00000446764	SLC22A20	A6NK97	555 aa		18.75	■□□□□ 0.59
GARNL3-209	ENST00000446764	ETV2	O00321	342 aa	Predicted RBP	18.75	■□□□□ 0.59
GARNL3-209	ENST00000446764	EIF1AY	O14602	144 aa	Known RBP	18.75	■□□□□ 0.59
GARNL3-209	ENST00000446764	DVL2	O14641	736 aa		18.75	■□□□□ 0.59
GARNL3-209	ENST00000446764	HNRNPR	O43390	633 aa	Known RBP	18.75	■□□□□ 0.59
GARNL3-209	ENST00000446764	EFNA2	O43921	213 aa		18.75	■□□□□ 0.59
GARNL3-209	ENST00000446764	TMIGD3	P0DMS9	266 aa	Predicted RBP	18.75	■□□□□ 0.59
GARNL3-209	ENST00000446764	ELK4	P28324	431 aa		18.75	■□□□□ 0.59
GARNL3-209	ENST00000446764	AGFG1	P52594	562 aa	Known RBP	18.75	■□□□□ 0.59
GARNL3-209	ENST00000446764	CRISP3	P54108	245 aa		18.75	■□□□□ 0.59
GARNL3-209	ENST00000446764	FOXF2	Q12947	444 aa		18.75	■□□□□ 0.59
GARNL3-209	ENST00000446764	CTU2	Q2VPK5	515 aa	Known RBP	18.75	■□□□□ 0.59
GARNL3-209	ENST00000446764	P4HA3	Q7Z4N8	544 aa		18.75	■□□□□ 0.59
GARNL3-209	ENST00000446764	RETREG3	Q86VR2	466 aa		18.75	■□□□□ 0.59
GARNL3-209	ENST00000446764	ACBD4	Q8NC06	268 aa		18.75	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 51 ms