RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 MGAT4BQ9UQ53 548 aa12.69□□□□□ -0.38
HMGN1-208ENST00000443046 UTP11Q9Y3A2 253 aaKnown RBP12.69□□□□□ -0.38
HMGN1-208ENST00000443046 ACTL7BQ9Y614 415 aa12.69□□□□□ -0.38
HMGN1-208ENST00000443046 OR5H1A6NKK0 313 aa12.68□□□□□ -0.38
HMGN1-208ENST00000443046 GJE1A6NN92 205 aa12.68□□□□□ -0.38
HMGN1-208ENST00000443046 ZNF724A8MTY0 619 aa12.68□□□□□ -0.38
HMGN1-208ENST00000443046 ENO1P06733 434 aaKnown RBP12.68□□□□□ -0.38
HMGN1-208ENST00000443046 ACP2P11117 423 aa12.68□□□□□ -0.38
HMGN1-208ENST00000443046 PTAFRP25105 342 aa12.68□□□□□ -0.38
HMGN1-208ENST00000443046 HMOX2P30519 316 aa12.68□□□□□ -0.38
HMGN1-208ENST00000443046 RAC3P60763 192 aa12.68□□□□□ -0.38
HMGN1-208ENST00000443046 ZNF117Q03924 483 aa12.68□□□□□ -0.38
HMGN1-208ENST00000443046 BTKQ06187 659 aa12.68□□□□□ -0.38
HMGN1-208ENST00000443046 SPOCK1Q08629 439 aa12.68□□□□□ -0.38
HMGN1-208ENST00000443046 ZNF544Q6NX49 715 aa12.68□□□□□ -0.38
HMGN1-208ENST00000443046 TMEM108Q6UXF1 575 aa12.68□□□□□ -0.38
HMGN1-208ENST00000443046 IKBIPQ70UQ0 350 aa12.68□□□□□ -0.38
HMGN1-208ENST00000443046 FBXL14Q8N1E6 418 aa12.68□□□□□ -0.38
HMGN1-208ENST00000443046 MMGT1Q8N4V1 131 aa12.68□□□□□ -0.38
HMGN1-208ENST00000443046 SLC16A11Q8NCK7 471 aa12.68□□□□□ -0.38
HMGN1-208ENST00000443046 FBXO27Q8NI29 283 aa12.68□□□□□ -0.38
HMGN1-208ENST00000443046 FAM76AQ8TAV0 307 aa12.68□□□□□ -0.38
HMGN1-208ENST00000443046 ZFP90Q8TF47 636 aa12.68□□□□□ -0.38
HMGN1-208ENST00000443046 MSI2Q96DH6 328 aaKnown RBP12.68□□□□□ -0.38
HMGN1-208ENST00000443046 TMEM237Q96Q45 408 aa12.68□□□□□ -0.38
HMGN1-208ENST00000443046 KCNA7Q96RP8 456 aa12.68□□□□□ -0.38
HMGN1-208ENST00000443046 PRR14Q9BWN1 585 aa12.68□□□□□ -0.38
HMGN1-208ENST00000443046 KCNF1Q9H3M0 494 aa12.68□□□□□ -0.38
HMGN1-208ENST00000443046 ZDHHC18Q9NUE0 388 aa12.68□□□□□ -0.38
HMGN1-208ENST00000443046 KLHL9Q9P2J3 617 aa12.68□□□□□ -0.38
HMGN1-208ENST00000443046 ICAM5Q9UMF0 924 aa12.68□□□□□ -0.38
HMGN1-208ENST00000443046 TIMM22Q9Y584 194 aa12.68□□□□□ -0.38
HMGN1-208ENST00000443046 LOC100289279A0A1B0GTE1 492 aa12.67□□□□□ -0.38
HMGN1-208ENST00000443046 KIF2AO00139 706 aaPredicted RBP12.67□□□□□ -0.38
HMGN1-208ENST00000443046 ETV2O00321 342 aaPredicted RBP12.67□□□□□ -0.38
HMGN1-208ENST00000443046 OIP5O43482 229 aa12.67□□□□□ -0.38
HMGN1-208ENST00000443046 CYTIPO60759 359 aa12.67□□□□□ -0.38
HMGN1-208ENST00000443046 IMPDH1P20839 514 aa12.67□□□□□ -0.38
HMGN1-208ENST00000443046 CD40P25942 277 aa12.67□□□□□ -0.38
HMGN1-208ENST00000443046 FABP6P51161 128 aa12.67□□□□□ -0.38
HMGN1-208ENST00000443046 PKNOX1P55347 436 aa12.67□□□□□ -0.38
HMGN1-208ENST00000443046 DUSP5Q16690 384 aa12.67□□□□□ -0.38
HMGN1-208ENST00000443046 LIPNQ5VXI9 398 aa12.67□□□□□ -0.38
HMGN1-208ENST00000443046 CBLN3Q6UW01 205 aa12.67□□□□□ -0.38
HMGN1-208ENST00000443046 MTERF4Q7Z6M4 381 aaKnown RBP12.67□□□□□ -0.38
HMGN1-208ENST00000443046 CEP70Q8NHQ1 597 aa12.67□□□□□ -0.38
HMGN1-208ENST00000443046 GPR119Q8TDV5 335 aa12.67□□□□□ -0.38
HMGN1-208ENST00000443046 ZNF764Q96H86 408 aaPredicted RBP12.67□□□□□ -0.38
HMGN1-208ENST00000443046 NINJ2Q9NZG7 142 aa12.67□□□□□ -0.38
HMGN1-208ENST00000443046 SLC25A15Q9Y619 301 aa12.67□□□□□ -0.38
HMGN1-208ENST00000443046 GPC6Q9Y625 555 aaPredicted RBP12.67□□□□□ -0.38
HMGN1-208ENST00000443046 DYSFO75923 2080 aa12.66□□□□□ -0.38
HMGN1-208ENST00000443046 TGP01266 2768 aa12.66□□□□□ -0.38
HMGN1-208ENST00000443046 IGHV3-15A0A0B4J1V0 119 aa12.66□□□□□ -0.38
HMGN1-208ENST00000443046 NPIPB8E9PQR5 432 aa12.66□□□□□ -0.38
HMGN1-208ENST00000443046 SCDO00767 359 aa12.66□□□□□ -0.38
HMGN1-208ENST00000443046 SMAD9O15198 467 aaKnown RBP12.66□□□□□ -0.38
HMGN1-208ENST00000443046 LY6HO94772 140 aa12.66□□□□□ -0.38
HMGN1-208ENST00000443046 HSPA4LO95757 839 aa12.66□□□□□ -0.38
HMGN1-208ENST00000443046 DHRS4L1P0CG22 281 aa12.66□□□□□ -0.38
HMGN1-208ENST00000443046 PRKCAP17252 672 aa12.66□□□□□ -0.38
HMGN1-208ENST00000443046 PHBP35232 272 aa12.66□□□□□ -0.38
HMGN1-208ENST00000443046 SERPINB4P48594 390 aa12.66□□□□□ -0.38
HMGN1-208ENST00000443046 SERPINB9P50453 376 aa12.66□□□□□ -0.38
HMGN1-208ENST00000443046 C2orf54Q08AI8 447 aa12.66□□□□□ -0.38
HMGN1-208ENST00000443046 RASGEF1BQ0VAM2 473 aa12.66□□□□□ -0.38
HMGN1-208ENST00000443046 HSPB3Q12988 150 aa12.66□□□□□ -0.38
HMGN1-208ENST00000443046 LCP2Q13094 533 aa12.66□□□□□ -0.38
HMGN1-208ENST00000443046 SQLEQ14534 574 aa12.66□□□□□ -0.38
HMGN1-208ENST00000443046 TOMM34Q15785 309 aaPredicted RBP12.66□□□□□ -0.38
HMGN1-208ENST00000443046 SLC25A53Q5H9E4 307 aa12.66□□□□□ -0.38
HMGN1-208ENST00000443046 SLC22A25Q6T423 547 aa12.66□□□□□ -0.38
HMGN1-208ENST00000443046 TRIM46Q7Z4K8 759 aa12.66□□□□□ -0.38
HMGN1-208ENST00000443046 MEX3DQ86XN8 651 aaKnown RBP12.66□□□□□ -0.38
HMGN1-208ENST00000443046 RELL1Q8IUW5 271 aa12.66□□□□□ -0.38
HMGN1-208ENST00000443046 NUP43Q8NFH3 380 aa12.66□□□□□ -0.38
HMGN1-208ENST00000443046 OR2W6PQ8NHA6 318 aa12.66□□□□□ -0.38
HMGN1-208ENST00000443046 CDC26Q8NHZ8 85 aa12.66□□□□□ -0.38
HMGN1-208ENST00000443046 EGLN2Q96KS0 407 aa12.66□□□□□ -0.38
HMGN1-208ENST00000443046 ZNF300Q96RE9 604 aaPredicted RBP12.66□□□□□ -0.38
HMGN1-208ENST00000443046 INPP5KQ9BT40 448 aa12.66□□□□□ -0.38
HMGN1-208ENST00000443046 PLA2G12AQ9BZM1 189 aa12.66□□□□□ -0.38
HMGN1-208ENST00000443046 RAB17Q9H0T7 212 aa12.66□□□□□ -0.38
HMGN1-208ENST00000443046 CHODLQ9H9P2 273 aa12.66□□□□□ -0.38
HMGN1-208ENST00000443046 STK38LQ9Y2H1 464 aa12.66□□□□□ -0.38
HMGN1-208ENST00000443046 POLR3HQ9Y535 204 aaPredicted RBP12.66□□□□□ -0.38
HMGN1-208ENST00000443046 CCDC151A5D8V7 595 aa12.65□□□□□ -0.38
HMGN1-208ENST00000443046 C9JVG2 144 aa12.65□□□□□ -0.38
HMGN1-208ENST00000443046 NDUFS8O00217 210 aa12.65□□□□□ -0.38
HMGN1-208ENST00000443046 TBX19O60806 448 aa12.65□□□□□ -0.38
HMGN1-208ENST00000443046 INHBAP08476 426 aa12.65□□□□□ -0.38
HMGN1-208ENST00000443046 HPGDP15428 266 aa12.65□□□□□ -0.38
HMGN1-208ENST00000443046 FRKP42685 505 aaPredicted RBP12.65□□□□□ -0.38
HMGN1-208ENST00000443046 NR4A2P43354 598 aa12.65□□□□□ -0.38
HMGN1-208ENST00000443046 P2RX1P51575 399 aa12.65□□□□□ -0.38
HMGN1-208ENST00000443046 FOXA1P55317 472 aa12.65□□□□□ -0.38
HMGN1-208ENST00000443046 SUMO3P55854 103 aaPredicted RBP12.65□□□□□ -0.38
HMGN1-208ENST00000443046 KIAA0040Q15053 153 aa12.65□□□□□ -0.38
HMGN1-208ENST00000443046 KLHL26Q53HC5 615 aa12.65□□□□□ -0.38
HMGN1-208ENST00000443046 SPDYAQ5MJ70 313 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms