RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 RFWD2Q8NHY2 731 aa21.29■■□□□ 1
VARS-217ENST00000440048 GPR119Q8TDV5 335 aa21.29■■□□□ 1
VARS-217ENST00000440048 STON2Q8WXE9 905 aa21.29■■□□□ 1
VARS-217ENST00000440048 GTF2H4Q92759 462 aa21.29■■□□□ 1
VARS-217ENST00000440048 INTS12Q96CB8 462 aaKnown RBP21.29■■□□□ 1
VARS-217ENST00000440048 ZFP3Q96NJ6 502 aa21.29■■□□□ 1
VARS-217ENST00000440048 STOML1Q9UBI4 398 aa21.29■■□□□ 1
VARS-217ENST00000440048 LIPT1Q9Y234 373 aa21.29■■□□□ 1
VARS-217ENST00000440048 L3MBTL1Q9Y468 752 aa21.29■■□□□ 1
VARS-217ENST00000440048 SLC22A20A6NK97 555 aa21.28■■□□□ 1
VARS-217ENST00000440048 H6PDO95479 791 aa21.28■■□□□ 1
VARS-217ENST00000440048 EIF1P41567 113 aaKnown RBP21.28■■□□□ 1
VARS-217ENST00000440048 ATP4BP51164 291 aa21.28■■□□□ 1
VARS-217ENST00000440048 MVDP53602 400 aa21.28■■□□□ 1
VARS-217ENST00000440048 DLX5P56178 289 aa21.28■■□□□ 1
VARS-217ENST00000440048 HPCAP84074 193 aa21.28■■□□□ 1
VARS-217ENST00000440048 FOXF1Q12946 379 aa21.28■■□□□ 1
VARS-217ENST00000440048 TOMM34Q15785 309 aaPredicted RBP21.28■■□□□ 1
VARS-217ENST00000440048 SLC2A7Q6PXP3 512 aa21.28■■□□□ 1
VARS-217ENST00000440048 BLOC1S3Q6QNY0 202 aa21.28■■□□□ 1
VARS-217ENST00000440048 P4HA3Q7Z4N8 544 aa21.28■■□□□ 1
VARS-217ENST00000440048 DMRTC2Q8IXT2 367 aaPredicted RBP21.28■■□□□ 1
VARS-217ENST00000440048 TMCO5AQ8N6Q1 288 aa21.28■■□□□ 1
VARS-217ENST00000440048 METTL25Q8N6Q8 603 aa21.28■■□□□ 1
VARS-217ENST00000440048 OR5W2Q8NH69 310 aa21.28■■□□□ 1
VARS-217ENST00000440048 OIT3Q8WWZ8 545 aa21.28■■□□□ 1
VARS-217ENST00000440048 FIG4Q92562 907 aa21.28■■□□□ 1
VARS-217ENST00000440048 ZG16BQ96DA0 208 aa21.28■■□□□ 1
VARS-217ENST00000440048 ZNF845Q96IR2 970 aaPredicted RBP21.28■■□□□ 1
VARS-217ENST00000440048 TRNT1Q96Q11 434 aaKnown RBP21.28■■□□□ 1
VARS-217ENST00000440048 PINK1Q9BXM7 581 aa21.28■■□□□ 1
VARS-217ENST00000440048 LAT2Q9GZY6 243 aa21.28■■□□□ 1
VARS-217ENST00000440048 TPT1P8Q9HAU6 139 aa21.28■■□□□ 1
VARS-217ENST00000440048 NPHS2Q9NP85 383 aa21.28■■□□□ 1
VARS-217ENST00000440048 CCDC167Q9P0B6 97 aa21.28■■□□□ 1
VARS-217ENST00000440048 DCTN4Q9UJW0 460 aa21.28■■□□□ 1
VARS-217ENST00000440048 CSTAP01040 98 aa21.27■■□□□ 1
VARS-217ENST00000440048 OPN1LWP04000 364 aa21.27■■□□□ 1
VARS-217ENST00000440048 CHRM4P08173 479 aa21.27■■□□□ 1
VARS-217ENST00000440048 IL11P20809 199 aa21.27■■□□□ 1
VARS-217ENST00000440048 MAGEA8P43361 318 aa21.27■■□□□ 1
VARS-217ENST00000440048 ASCL1P50553 236 aa21.27■■□□□ 1
VARS-217ENST00000440048 RPS3AP61247 264 aaKnown RBP21.27■■□□□ 1
VARS-217ENST00000440048 RAC1P63000 192 aa21.27■■□□□ 1
VARS-217ENST00000440048 SKP2Q13309 424 aa21.27■■□□□ 1
VARS-217ENST00000440048 FGFBP1Q14512 234 aa21.27■■□□□ 1
VARS-217ENST00000440048 EIF3MQ7L2H7 374 aaKnown RBP21.27■■□□□ 1
VARS-217ENST00000440048 HMGN2P46Q86SG4 172 aa21.27■■□□□ 1
VARS-217ENST00000440048 GCNT2Q8N0V5 402 aa21.27■■□□□ 1
VARS-217ENST00000440048 TOR1AIP2Q8NFQ8 470 aa21.27■■□□□ 1
VARS-217ENST00000440048 ZNF524Q96C55 264 aa21.27■■□□□ 1
VARS-217ENST00000440048 ARSGQ96EG1 525 aa21.27■■□□□ 1
VARS-217ENST00000440048 AURKBQ96GD4 344 aaPredicted RBP21.27■■□□□ 1
VARS-217ENST00000440048 PAIP1Q9H074 479 aaKnown RBP21.27■■□□□ 1
VARS-217ENST00000440048 SLC38A1Q9H2H9 487 aa21.27■■□□□ 1
VARS-217ENST00000440048 SYT5O00445 386 aa21.26■□□□□ 0.99
VARS-217ENST00000440048 NR5A2O00482 541 aa21.26■□□□□ 0.99
VARS-217ENST00000440048 EIF1AYO14602 144 aaKnown RBP21.26■□□□□ 0.99
VARS-217ENST00000440048 CYP7B1O75881 506 aa21.26■□□□□ 0.99
VARS-217ENST00000440048 CCR4P51679 360 aa21.26■□□□□ 0.99
VARS-217ENST00000440048 IRX1P78414 480 aaPredicted RBP21.26■□□□□ 0.99
VARS-217ENST00000440048 SQLEQ14534 574 aa21.26■□□□□ 0.99
VARS-217ENST00000440048 FBXL19-AS1Q494R0 122 aa21.26■□□□□ 0.99
VARS-217ENST00000440048 AGKQ53H12 422 aa21.26■□□□□ 0.99
VARS-217ENST00000440048 LRRC74BQ6ZQY2 392 aa21.26■□□□□ 0.99
VARS-217ENST00000440048 FBXO27Q8NI29 283 aa21.26■□□□□ 0.99
VARS-217ENST00000440048 SPDL1Q96EA4 605 aa21.26■□□□□ 0.99
VARS-217ENST00000440048 SFXN3Q9BWM7 321 aa21.26■□□□□ 0.99
VARS-217ENST00000440048 QRSL1Q9H0R6 528 aaKnown RBP21.26■□□□□ 0.99
VARS-217ENST00000440048 TMEM185BQ9H7F4 350 aa21.26■□□□□ 0.99
VARS-217ENST00000440048 SLC52A3Q9NQ40 469 aa21.26■□□□□ 0.99
VARS-217ENST00000440048 ZNF175Q9Y473 711 aa21.26■□□□□ 0.99
VARS-217ENST00000440048 PCDHB14Q9Y5E9 798 aa21.26■□□□□ 0.99
VARS-217ENST00000440048 GPC6Q9Y625 555 aaPredicted RBP21.26■□□□□ 0.99
VARS-217ENST00000440048 UQCRHLA0A096LP55 91 aa21.25■□□□□ 0.99
VARS-217ENST00000440048 ENO4A6NNW6 628 aa21.25■□□□□ 0.99
VARS-217ENST00000440048 EFNA2O43921 213 aa21.25■□□□□ 0.99
VARS-217ENST00000440048 UBTFL6P0CB48 400 aaPredicted RBP21.25■□□□□ 0.99
VARS-217ENST00000440048 NR2F1P10589 423 aa21.25■□□□□ 0.99
VARS-217ENST00000440048 ETFAP13804 333 aa21.25■□□□□ 0.99
VARS-217ENST00000440048 PRKCAP17252 672 aa21.25■□□□□ 0.99
VARS-217ENST00000440048 ME2P23368 584 aa21.25■□□□□ 0.99
VARS-217ENST00000440048 ADH6P28332 368 aa21.25■□□□□ 0.99
VARS-217ENST00000440048 PGM1P36871 562 aa21.25■□□□□ 0.99
VARS-217ENST00000440048 CRATP43155 626 aa21.25■□□□□ 0.99
VARS-217ENST00000440048 EIF1AXP47813 144 aaKnown RBP21.25■□□□□ 0.99
VARS-217ENST00000440048 CBFBQ13951 182 aa21.25■□□□□ 0.99
VARS-217ENST00000440048 PON3Q15166 354 aa21.25■□□□□ 0.99
VARS-217ENST00000440048 QPRTQ15274 297 aa21.25■□□□□ 0.99
VARS-217ENST00000440048 MAPK11Q15759 364 aa21.25■□□□□ 0.99
VARS-217ENST00000440048 CTU2Q2VPK5 515 aaKnown RBP21.25■□□□□ 0.99
VARS-217ENST00000440048 FAM71CQ8NEG0 241 aa21.25■□□□□ 0.99
VARS-217ENST00000440048 FNDC9Q8TBE3 224 aa21.25■□□□□ 0.99
VARS-217ENST00000440048 ADGRG7Q96K78 797 aa21.25■□□□□ 0.99
VARS-217ENST00000440048 THUMPD3Q9BV44 507 aaKnown RBP21.25■□□□□ 0.99
VARS-217ENST00000440048 TMEM45AQ9NWC5 275 aa21.25■□□□□ 0.99
VARS-217ENST00000440048 JKAMPQ9P055 326 aa21.25■□□□□ 0.99
VARS-217ENST00000440048 SLC35A3Q9Y2D2 325 aa21.25■□□□□ 0.99
VARS-217ENST00000440048 ANKHD1Q8IWZ3 2542 aaKnown RBP21.25■□□□□ 0.99
VARS-217ENST00000440048 A0A096LPI6 279 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms