RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 UBQLN3Q9H347 655 aa10.85□□□□□ -0.67
SMAD3-202ENST00000439724 HHATLQ9HCP6 504 aa10.85□□□□□ -0.67
SMAD3-202ENST00000439724 FGF20Q9NP95 211 aaPredicted RBP10.85□□□□□ -0.67
SMAD3-202ENST00000439724 C20orf141Q9NUB4 165 aa10.85□□□□□ -0.67
SMAD3-202ENST00000439724 SLC35A3Q9Y2D2 325 aa10.85□□□□□ -0.67
SMAD3-202ENST00000439724 PCDHGA3Q9Y5H0 932 aa10.85□□□□□ -0.67
SMAD3-202ENST00000439724 EYSQ5T1H1 3165 aa10.85□□□□□ -0.67
SMAD3-202ENST00000439724 SIGLEC6O43699 453 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 CSO75390 466 aaKnown RBP10.84□□□□□ -0.67
SMAD3-202ENST00000439724 RCBTB2O95199 551 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 TBXA2RP21731 343 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 LCN1P31025 176 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 SERPINB10P48595 397 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 CLK1P49759 484 aaKnown RBP10.84□□□□□ -0.67
SMAD3-202ENST00000439724 EFNA3P52797 238 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 LIMK1P53667 647 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 MLLT10P55197 1068 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 FXYD6P3P58550 94 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 DCAF7P61962 342 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 LSM3P62310 102 aaKnown RBP10.84□□□□□ -0.67
SMAD3-202ENST00000439724 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.84□□□□□ -0.67
SMAD3-202ENST00000439724 MED22Q15528 200 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 TIMM50Q3ZCQ8 353 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 KLHL26Q53HC5 615 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 ALG10BQ5I7T1 473 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 FNDC7Q5VTL7 733 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 AADACL4Q5VUY2 407 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 RHBDD2Q6NTF9 364 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 ULK3Q6PHR2 472 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 LINC00114Q6XXX2 140 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 TMPRSS9Q7Z410 1059 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 BMP8AQ7Z5Y6 402 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 RABEPKQ7Z6M1 372 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 MAML2Q8IZL2 1156 aaPredicted RBP10.84□□□□□ -0.67
SMAD3-202ENST00000439724 SLC34A3Q8N130 599 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 SLC43A2Q8N370 569 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 ZNF321PQ8N8H1 164 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 OR4D9Q8NGE8 314 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 OR4C3Q8NH37 302 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 RNF217Q8TC41 542 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 PIGKQ92643 395 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 NAT6Q93015 286 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 RFKQ969G6 155 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 ADIPOR1Q96A54 375 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 BPIFA2Q96DR5 249 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 PLEKHA8Q96JA3 519 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 TAPBPLQ9BX59 468 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 OR8D2Q9GZM6 311 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 FN3KQ9H479 309 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 ATP13A2Q9NQ11 1180 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 MEPEQ9NQ76 525 aaPredicted RBP10.84□□□□□ -0.67
SMAD3-202ENST00000439724 MRTO4Q9UKD2 239 aaKnown RBP10.84□□□□□ -0.67
SMAD3-202ENST00000439724 SIGLEC7Q9Y286 467 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 GPR52Q9Y2T5 361 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 CLCA3PQ9Y6N3 262 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 IGLV3-12A0A075B6K2 115 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 A0A1W2PQM1 296 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 CPED1A4D0V7 1026 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 A8MUA0 341 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 CCRL2O00421 344 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 BHLHE40O14503 412 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 MYL12BO14950 172 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 FOXD2O60548 495 aaPredicted RBP10.84□□□□□ -0.67
SMAD3-202ENST00000439724 HCN1O60741 890 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 SCG5P05408 212 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 HSMCR30P0CW71 290 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 ENDOUP21128 410 aaKnown RBP10.84□□□□□ -0.67
SMAD3-202ENST00000439724 PTNP21246 168 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 HOXD12P35452 270 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 MTNR1AP48039 350 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 GPR143P51810 404 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 CDH11P55287 796 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 TUBA1BP68363 451 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 CCL7P80098 99 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 CSTF1Q05048 431 aaKnown RBP10.84□□□□□ -0.67
SMAD3-202ENST00000439724 SPHARQ15513 63 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 TSTQ16762 297 aaKnown RBP10.84□□□□□ -0.67
SMAD3-202ENST00000439724 ZNF829Q3KNS6 432 aaPredicted RBP10.84□□□□□ -0.67
SMAD3-202ENST00000439724 VWA2Q5GFL6 755 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 PRPF38BQ5VTL8 546 aaKnown RBP10.84□□□□□ -0.67
SMAD3-202ENST00000439724 C1orf189Q5VU69 101 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 NXNL2Q5VZ03 156 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 KIRREL2Q6UWL6 708 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 HSDL2Q6YN16 418 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 TUBA1AQ71U36 451 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 COX15Q7KZN9 410 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 SLCO6A1Q86UG4 719 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 ATCAYQ86WG3 371 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 CROCCP3Q8IVE0 287 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 LNX2Q8N448 690 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 ZNF527Q8NB42 609 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 PLPP5Q8NEB5 264 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 KBTBD8Q8NFY9 601 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 DAZLQ92904 295 aaKnown RBP10.84□□□□□ -0.67
SMAD3-202ENST00000439724 BORCS5Q969J3 196 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 ZHX1-C8orf76Q96EF9 292 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 RNFT2Q96EX2 444 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 VMP1Q96GC9 406 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 LCORQ96JN0 433 aaPredicted RBP10.84□□□□□ -0.67
SMAD3-202ENST00000439724 ZC3H10Q96K80 434 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms