RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 MAB21L1Q13394 359 aa15.21■□□□□ 0.03
CLCNKA-203ENST00000439316 GALEQ14376 348 aa15.21■□□□□ 0.03
CLCNKA-203ENST00000439316 PRPF38BQ5VTL8 546 aaKnown RBP15.21■□□□□ 0.03
CLCNKA-203ENST00000439316 LNX2Q8N448 690 aa15.21■□□□□ 0.03
CLCNKA-203ENST00000439316 OR4M1Q8NGD0 313 aa15.21■□□□□ 0.03
CLCNKA-203ENST00000439316 NT5CQ8TCD5 201 aa15.21■□□□□ 0.03
CLCNKA-203ENST00000439316 AKAP1Q92667 903 aaKnown RBP eCLIP15.21■□□□□ 0.03
CLCNKA-203ENST00000439316 ART5Q96L15 291 aa15.21■□□□□ 0.03
CLCNKA-203ENST00000439316 HS6ST2Q96MM7 605 aa15.21■□□□□ 0.03
CLCNKA-203ENST00000439316 HCAR1Q9BXC0 346 aa15.21■□□□□ 0.03
CLCNKA-203ENST00000439316 ENAMQ9NRM1 1142 aa15.21■□□□□ 0.03
CLCNKA-203ENST00000439316 INPP5EQ9NRR6 644 aa15.21■□□□□ 0.03
CLCNKA-203ENST00000439316 GPSM3Q9Y4H4 160 aa15.21■□□□□ 0.03
CLCNKA-203ENST00000439316 PLOD3O60568 738 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 EIF4EP06730 217 aaKnown RBP15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 HK1P19367 917 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 F8A1P23610 371 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 RBMS1P29558 406 aaKnown RBP15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 RFX3P48380 749 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 RAB25P57735 213 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 SNRPNP63162 240 aaKnown RBP15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 PLA1AQ53H76 456 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 DGLUCYQ7Z3D6 616 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 SAMD14Q8IZD0 417 aaPredicted RBP15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 RNF113BQ8IZP6 322 aaKnown RBP15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 OR7G1Q8NGA0 311 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 OR5W2Q8NH69 310 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 CD180Q99467 661 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 SDF2Q99470 211 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 TBX5Q99593 518 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 ZNF350Q9GZX5 532 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 HDHD2Q9H0R4 259 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 PPIL3Q9H2H8 161 aaKnown RBP15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 DAPL1A0PJW8 107 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 LANCL1O43813 399 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 TFPIP10646 304 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 PRG2P13727 222 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 FOSL2P15408 326 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 FUT1P19526 365 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 SHC1P29353 583 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 EVI2BP34910 448 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 IGFALSP35858 605 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 RPS15AP62244 130 aaKnown RBP15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 MRPS21P82921 87 aaKnown RBP15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 RGS1Q08116 209 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 BTBD16Q32M84 506 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 LAMTOR1Q6IAA8 161 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 ASPGQ86U10 573 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 OAFQ86UD1 273 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 LSRQ86X29 649 aaPredicted RBP15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 PFN4Q8NHR9 129 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 RPLP0P6Q8NHW5 317 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 C17orf50Q8WW18 174 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 TMEM239Q8WW34 195 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 DEDD2Q8WXF8 326 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 FAM3CQ92520 227 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 RFT1Q96AA3 541 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 NACC2Q96BF6 587 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 GFM1Q96RP9 751 aaKnown RBP15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 ENKD1Q9H0I2 346 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 FOLH1BQ9HBA9 442 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 C20orf141Q9NUB4 165 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 KCMF1Q9P0J7 381 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 MOSPD1Q9UJG1 213 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 HEBP2Q9Y5Z4 205 aa15.2■□□□□ 0.02
CLCNKA-203ENST00000439316 VCANP13611 3396 aa15.19■□□□□ 0.02
CLCNKA-203ENST00000439316 PRR23AA6NEV1 266 aa15.19■□□□□ 0.02
CLCNKA-203ENST00000439316 PAHP00439 452 aa15.19■□□□□ 0.02
CLCNKA-203ENST00000439316 MT-ND5P03915 603 aa15.19■□□□□ 0.02
CLCNKA-203ENST00000439316 IFI30P13284 250 aa15.19■□□□□ 0.02
CLCNKA-203ENST00000439316 NPR2P20594 1047 aa15.19■□□□□ 0.02
CLCNKA-203ENST00000439316 TALDO1P37837 337 aa15.19■□□□□ 0.02
CLCNKA-203ENST00000439316 GPLD1P80108 840 aa15.19■□□□□ 0.02
CLCNKA-203ENST00000439316 TRAM1Q15629 374 aa15.19■□□□□ 0.02
CLCNKA-203ENST00000439316 MAPK14Q16539 360 aa15.19■□□□□ 0.02
CLCNKA-203ENST00000439316 EXOSC6Q5RKV6 272 aaKnown RBP15.19■□□□□ 0.02
CLCNKA-203ENST00000439316 CCNJQ5T5M9 372 aa15.19■□□□□ 0.02
CLCNKA-203ENST00000439316 GARNL3Q5VVW2 1013 aa15.19■□□□□ 0.02
CLCNKA-203ENST00000439316 BICRALQ6AI39 1079 aa15.19■□□□□ 0.02
CLCNKA-203ENST00000439316 PTCRAQ6ISU1 281 aaPredicted RBP15.19■□□□□ 0.02
CLCNKA-203ENST00000439316 SFXN4Q6P4A7 337 aa15.19■□□□□ 0.02
CLCNKA-203ENST00000439316 IL20RBQ6UXL0 311 aa15.19■□□□□ 0.02
CLCNKA-203ENST00000439316 ZNF619Q8N2I2 560 aa15.19■□□□□ 0.02
CLCNKA-203ENST00000439316 CADM2Q8N3J6 435 aa15.19■□□□□ 0.02
CLCNKA-203ENST00000439316 SLC37A3Q8NCC5 494 aa15.19■□□□□ 0.02
CLCNKA-203ENST00000439316 OR4K14Q8NGD5 310 aa15.19■□□□□ 0.02
CLCNKA-203ENST00000439316 COL26A1Q96A83 441 aa15.19■□□□□ 0.02
CLCNKA-203ENST00000439316 THAP7Q9BT49 309 aaPredicted RBP15.19■□□□□ 0.02
CLCNKA-203ENST00000439316 CMC2Q9NRP2 79 aa15.19■□□□□ 0.02
CLCNKA-203ENST00000439316 OR6C2Q9NZP2 312 aa15.19■□□□□ 0.02
CLCNKA-203ENST00000439316 A0A0G2JK05 382 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 SLC22A31A6NKX4 558 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 E9PI62 339 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 BTN3A3O00478 584 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 PLPP2O43688 288 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 DBIP07108 87 aaKnown RBP15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 SRFP11831 508 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 GLULP15104 373 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 HTR2BP41595 481 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 RPS21P63220 83 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms