RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 CMTM4Q8IZR5 234 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 SDR16C5Q8N3Y7 309 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 HDDC3Q8N4P3 179 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 OR10Z1Q8NGY1 313 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 PIGXQ8TBF5 258 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 ACOT12Q8WYK0 555 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 EFCAB11Q9BUY7 163 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 EVA1AQ9H8M9 152 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 CAPN10Q9HC96 672 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 HRASLSQ9HDD0 168 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 POLMQ9NP87 494 aaPredicted RBP12.45□□□□□ -0.42
ACTN1-204ENST00000438964 ZDHHC4Q9NPG8 344 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 COPZ2Q9P299 210 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 CYB5R1Q9UHQ9 305 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 SLC7A7Q9UM01 511 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 YIPF1Q9Y548 306 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 SLC5A10A0PJK1 596 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 ACOD1A6NK06 481 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 NEDD8-MDP1E9PL57 170 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 GNB5O14775 395 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 GREM1O60565 184 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 GLAP06280 429 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 PRG2P13727 222 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 ACHEP22303 614 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 RGS8P57771 180 aaPredicted RBP12.45□□□□□ -0.42
ACTN1-204ENST00000438964 CTAG1AP78358 180 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 TSPAN31Q12999 210 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 C6orf132Q5T0Z8 1188 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 TFAP2EQ6VUC0 442 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 GNPDA2Q8TDQ7 276 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 C2CD4CQ8TF44 421 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 LRRC46Q96FV0 321 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 BBS4Q96RK4 519 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 UBQLN3Q9H347 655 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 NOX3Q9HBY0 568 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 TRIM36Q9NQ86 728 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 ZNF106Q9H2Y7 1883 aaKnown RBP12.44□□□□□ -0.42
ACTN1-204ENST00000438964 TRAV27A0A087WT01 109 aa12.44□□□□□ -0.42
ACTN1-204ENST00000438964 LATO43561 262 aa12.44□□□□□ -0.42
ACTN1-204ENST00000438964 OR1F1O43749 312 aa12.44□□□□□ -0.42
ACTN1-204ENST00000438964 ZGLP1P0C6A0 271 aa12.44□□□□□ -0.42
ACTN1-204ENST00000438964 HTR1FP30939 366 aa12.44□□□□□ -0.42
ACTN1-204ENST00000438964 KLF9Q13886 244 aaPredicted RBP12.44□□□□□ -0.42
ACTN1-204ENST00000438964 LTB4RQ15722 352 aa12.44□□□□□ -0.42
ACTN1-204ENST00000438964 PRAMEF14Q5SWL7 426 aa12.44□□□□□ -0.42
ACTN1-204ENST00000438964 DCAF12L2Q5VW00 463 aa12.44□□□□□ -0.42
ACTN1-204ENST00000438964 PRAMEF13Q5VWM6 474 aa12.44□□□□□ -0.42
ACTN1-204ENST00000438964 UBL7Q96S82 380 aaPredicted RBP12.44□□□□□ -0.42
ACTN1-204ENST00000438964 LHX9Q9NQ69 397 aa12.44□□□□□ -0.42
ACTN1-204ENST00000438964 TM7SF3Q9NS93 570 aa12.44□□□□□ -0.42
ACTN1-204ENST00000438964 MRPS18AQ9NVS2 196 aaKnown RBP12.44□□□□□ -0.42
ACTN1-204ENST00000438964 ASB6Q9NWX5 421 aa12.44□□□□□ -0.42
ACTN1-204ENST00000438964 GMEB2Q9UKD1 530 aa12.44□□□□□ -0.42
ACTN1-204ENST00000438964 OR10H1Q9Y4A9 318 aa12.44□□□□□ -0.42
ACTN1-204ENST00000438964 MCRIP1C9JLW8 97 aa12.44□□□□□ -0.42
ACTN1-204ENST00000438964 MTRF1O75570 445 aaKnown RBP12.44□□□□□ -0.42
ACTN1-204ENST00000438964 ZNF35P13682 527 aa12.44□□□□□ -0.42
ACTN1-204ENST00000438964 CCR9P51686 369 aa12.44□□□□□ -0.42
ACTN1-204ENST00000438964 ATXN7L3Q14CW9 347 aaPredicted RBP12.44□□□□□ -0.42
ACTN1-204ENST00000438964 LRRC37A5PQ49AS3 106 aa12.44□□□□□ -0.42
ACTN1-204ENST00000438964 THSD4Q6ZMP0 1018 aa12.44□□□□□ -0.42
ACTN1-204ENST00000438964 ZFP82Q8N141 532 aa12.44□□□□□ -0.42
ACTN1-204ENST00000438964 OR2T33Q8NG76 320 aa12.44□□□□□ -0.42
ACTN1-204ENST00000438964 PTP4A1Q93096 173 aa12.44□□□□□ -0.42
ACTN1-204ENST00000438964 RAD51AP1Q96B01 352 aa12.44□□□□□ -0.42
ACTN1-204ENST00000438964 ZNF578Q96N58 590 aaPredicted RBP12.44□□□□□ -0.42
ACTN1-204ENST00000438964 ZCCHC2Q9C0B9 1178 aaKnown RBP12.44□□□□□ -0.42
ACTN1-204ENST00000438964 CCL26Q9Y258 94 aa12.44□□□□□ -0.42
ACTN1-204ENST00000438964 PLSCR5A0PG75 271 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 TMEM189-UBE2V1I3L0A0 370 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 IMPA2O14732 288 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 LCMT2O60294 686 aaKnown RBP12.43□□□□□ -0.42
ACTN1-204ENST00000438964 F12P00748 615 aaPredicted RBP12.43□□□□□ -0.42
ACTN1-204ENST00000438964 TMIGD3P0DMS9 266 aaPredicted RBP12.43□□□□□ -0.42
ACTN1-204ENST00000438964 ELNP15502 786 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 NDUFA9Q16795 377 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 ODF4Q2M2E3 257 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 FAM26DQ5JW98 314 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 SLC25A30Q5SVS4 291 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 KHDRBS2Q5VWX1 349 aaKnown RBP12.43□□□□□ -0.42
ACTN1-204ENST00000438964 TMEM25Q86YD3 366 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 SHISA5Q8N114 240 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 BVESQ8NE79 360 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 OR52N1Q8NH53 320 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 GLYATL1Q969I3 302 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 LYSMD1Q96S90 227 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 C12orf57Q99622 126 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 MCHR1Q99705 422 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 FN3KQ9H479 309 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 KLHL31Q9H511 634 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 RETREG1Q9H6L5 497 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 CD93Q9NPY3 652 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 POT1Q9NUX5 634 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 ERVK-19Q9WJR5 959 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 ZNF98A6NK75 572 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 DNASE2O00115 360 aaPredicted RBP12.43□□□□□ -0.42
ACTN1-204ENST00000438964 FOXE1O00358 373 aaPredicted RBP12.43□□□□□ -0.42
ACTN1-204ENST00000438964 KCNAB3O43448 404 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 UBL3O95164 117 aa12.43□□□□□ -0.42
ACTN1-204ENST00000438964 IGHA1P01876 353 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms