RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 TPBGQ13641 420 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 FCN2Q15485 313 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 ZMAT1Q5H9K5 638 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 MRPL2Q5T653 305 aaKnown RBP6.25□□□□□ -1.41
CSDE1-205ENST00000438362 FAM69AQ5T7M9 428 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 SFXN4Q6P4A7 337 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 DNM1P34Q6PK57 102 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 FAM198BQ6UWH4 519 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 TMEM64Q6YI46 380 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 TECPR1Q7Z6L1 1165 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 RNF113BQ8IZP6 322 aaKnown RBP6.25□□□□□ -1.41
CSDE1-205ENST00000438362 IL17RDQ8NFM7 739 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 OR2L8Q8NGY9 312 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 THAP6Q8TBB0 222 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 HMGB4Q8WW32 186 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 SLC6A15Q9H2J7 730 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 UBQLN3Q9H347 655 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 PLEKHA1Q9HB21 404 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 TAS2R8Q9NYW2 309 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 FTSJ1Q9UET6 329 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 TRAPPC4Q9Y296 219 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 DSCR3O14972 297 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 CDC40O60508 579 aaKnown RBP eCLIP6.25□□□□□ -1.41
CSDE1-205ENST00000438362 ZNF432O94892 652 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 PRKCAP17252 672 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 P2RY2P41231 377 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 RAE1P78406 368 aaKnown RBP6.25□□□□□ -1.41
CSDE1-205ENST00000438362 IRF4Q15306 451 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 ZNF750Q32MQ0 723 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 LEG1Q6P5S2 330 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 ABHD17CQ6PCB6 329 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 KCTD18Q6PI47 426 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-205ENST00000438362 CREB3L2Q70SY1 520 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 ADIPOR2Q86V24 386 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 GALNT6Q8NCL4 622 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 OR13C2Q8NGS9 318 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 OR2T4Q8NH00 348 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 OR56B4Q8NH76 319 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 ELP4Q96EB1 424 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 OR8D2Q9GZM6 311 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 ABCG4Q9H172 646 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 ISYNA1Q9NPH2 558 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 SAGE1Q9NXZ1 904 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 PPIL1Q9Y3C6 166 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 PSMD9O00233 223 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 KHNYNO15037 678 aaKnown RBP6.24□□□□□ -1.41
CSDE1-205ENST00000438362 ARPC1BO15143 372 aaKnown RBP6.24□□□□□ -1.41
CSDE1-205ENST00000438362 SMAD9O15198 467 aaKnown RBP6.24□□□□□ -1.41
CSDE1-205ENST00000438362 AHSA1O95433 338 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 CYB5AP00167 134 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 C1QBP02746 253 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 MT-ND4P03905 459 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 MAS1P04201 325 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 CHRNB1P11230 501 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 GP1BBP13224 206 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 FUT1P19526 365 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 PSMB10P40306 273 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 FRKP42685 505 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-205ENST00000438362 FNTBP49356 437 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 HMGA2P52926 109 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 POU4F3Q15319 338 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 LTB4RQ15722 352 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 SWI5Q1ZZU3 235 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 TCEAL5Q5H9L2 206 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 PRAMEF8Q5VWM4 474 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 PRAMEF7Q5VXH5 474 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 SLC48A1Q6P1K1 146 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 ZNF322Q6U7Q0 402 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-205ENST00000438362 ADAMTSL4Q6UY14 1074 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 WASH2PQ6VEQ5 465 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 GDF7Q7Z4P5 450 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 SERPINA12Q8IW75 414 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 ZNF440Q8IYI8 595 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 ABHD4Q8TB40 342 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 TMEM255BQ8WV15 326 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 RIT1Q92963 219 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 TSACCQ96A04 125 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-205ENST00000438362 HAVCR1Q96D42 359 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 OR2A14Q96R47 310 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 APOOQ9BUR5 198 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 MRI1Q9BV20 369 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 ZBP1Q9H171 429 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 IL23AQ9NPF7 189 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 SH2B3Q9UQQ2 575 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 FARSAQ9Y285 508 aaKnown RBP6.24□□□□□ -1.41
CSDE1-205ENST00000438362 A0A0X1KG70 313 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-205ENST00000438362 SLC9B1P1A6NJY1 282 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 RHPN2P1A8MT19 583 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 FAM171A2A8MVW0 826 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 C11orf98E9PRG8 122 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 ACOT7O00154 380 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 LDB3O75112 727 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 UBL3O95164 117 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 CPMP14384 443 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 SNRPBP14678 240 aaKnown RBP6.24□□□□□ -1.41
CSDE1-205ENST00000438362 OR3A3P47888 321 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 OR3A2P47893 321 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 GZMMP51124 257 aa6.24□□□□□ -1.41
CSDE1-205ENST00000438362 CTXN1P60606 82 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms