RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 SCLYQ96I15 445 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 UBL7Q96S82 380 aaPredicted RBP6.97□□□□□ -1.29
CPSF6-202ENST00000435070 C11orf49Q9H6J7 331 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 RBPJLQ9UBG7 517 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 SSC5DA1L4H1 1573 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 DOCK1Q14185 1865 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 ANTXRLA6NF34 631 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 CD9P21926 228 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 SYPL1Q16563 259 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 ZNF75AQ96N20 296 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 OR51V1Q9H2C8 321 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 CXorf36Q9H7Y0 433 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 CXXC1Q9P0U4 656 aaPredicted RBP6.97□□□□□ -1.29
CPSF6-202ENST00000435070 CD84Q9UIB8 345 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 NPTNQ9Y639 398 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 KPNA3O00505 521 aaPredicted RBP6.97□□□□□ -1.29
CPSF6-202ENST00000435070 UBL3O95164 117 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 TIA1P31483 386 aaKnown RBP eCLIP6.97□□□□□ -1.291e-9■■■■■ 30.4
CPSF6-202ENST00000435070 EEF1A2Q05639 463 aaKnown RBP6.97□□□□□ -1.29
CPSF6-202ENST00000435070 PDZK1IP1Q13113 114 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 RBM39Q14498 530 aaKnown RBP6.97□□□□□ -1.29
CPSF6-202ENST00000435070 SMCO1Q147U7 214 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 RPE65Q16518 533 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 OR7E24Q6IFN5 339 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 TMEM17Q86X19 198 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 CXorf40AQ8TE69 158 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 UBTD2Q8WUN7 234 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 BTBD1Q9H0C5 482 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 PCDHGA5Q9Y5G8 931 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 RNF215Q9Y6U7 377 aa6.97□□□□□ -1.29
CPSF6-202ENST00000435070 MPTX1A8MV57 137 aa6.96□□□□□ -1.29
CPSF6-202ENST00000435070 GALR3O60755 368 aaPredicted RBP6.96□□□□□ -1.29
CPSF6-202ENST00000435070 DCTDP32321 178 aa6.96□□□□□ -1.29
CPSF6-202ENST00000435070 RPL3P39023 403 aaKnown RBP6.96□□□□□ -1.29
CPSF6-202ENST00000435070 RFC3P40938 356 aa6.96□□□□□ -1.29
CPSF6-202ENST00000435070 AKR1C3P42330 323 aa6.96□□□□□ -1.29
CPSF6-202ENST00000435070 GPR4P46093 362 aa6.96□□□□□ -1.29
CPSF6-202ENST00000435070 LUMP51884 338 aaPredicted RBP6.96□□□□□ -1.29
CPSF6-202ENST00000435070 PCBP3P57721 371 aaKnown RBP6.96□□□□□ -1.29
CPSF6-202ENST00000435070 PEG10Q86TG7 708 aaKnown RBP6.96□□□□□ -1.29
CPSF6-202ENST00000435070 THOC6Q86W42 341 aaKnown RBP6.96□□□□□ -1.29
CPSF6-202ENST00000435070 SIRT6Q8N6T7 355 aa6.96□□□□□ -1.29
CPSF6-202ENST00000435070 OR5D16Q8NGK9 328 aa6.96□□□□□ -1.29
CPSF6-202ENST00000435070 TCEAL4Q96EI5 215 aa6.96□□□□□ -1.29
CPSF6-202ENST00000435070 ZNF471Q9BX82 626 aaPredicted RBP6.96□□□□□ -1.29
CPSF6-202ENST00000435070 MED9Q9NWA0 146 aa6.96□□□□□ -1.29
CPSF6-202ENST00000435070 KCND3Q9UK17 655 aa6.96□□□□□ -1.29
CPSF6-202ENST00000435070 CBLCQ9ULV8 474 aa6.96□□□□□ -1.29
CPSF6-202ENST00000435070 C14orf166Q9Y224 244 aaKnown RBP6.96□□□□□ -1.29
CPSF6-202ENST00000435070 FAM170BA6NMN3 283 aa6.96□□□□□ -1.29
CPSF6-202ENST00000435070 RNASET2O00584 256 aaKnown RBP6.96□□□□□ -1.29
CPSF6-202ENST00000435070 PRICKLE3O43900 615 aaPredicted RBP6.96□□□□□ -1.29
CPSF6-202ENST00000435070 EIF1BO60739 113 aaKnown RBP6.96□□□□□ -1.29
CPSF6-202ENST00000435070 GIPP09681 153 aaPredicted RBP6.96□□□□□ -1.29
CPSF6-202ENST00000435070 CR2P20023 1033 aa6.96□□□□□ -1.29
CPSF6-202ENST00000435070 EIF1P41567 113 aaKnown RBP6.96□□□□□ -1.29
CPSF6-202ENST00000435070 KCNJ5P48544 419 aa6.96□□□□□ -1.29
CPSF6-202ENST00000435070 MTNR1BP49286 362 aa6.96□□□□□ -1.29
CPSF6-202ENST00000435070 SGSHP51688 502 aa6.96□□□□□ -1.29
CPSF6-202ENST00000435070 ARFIP1P53367 373 aa6.96□□□□□ -1.29
CPSF6-202ENST00000435070 H2BFSP57053 126 aa6.96□□□□□ -1.29
CPSF6-202ENST00000435070 PFN3P60673 137 aa6.96□□□□□ -1.29
CPSF6-202ENST00000435070 HES5Q5TA89 166 aa6.96□□□□□ -1.29
CPSF6-202ENST00000435070 COMMD6Q7Z4G1 85 aa6.96□□□□□ -1.29
CPSF6-202ENST00000435070 C2orf73Q8N5S3 287 aaPredicted RBP6.96□□□□□ -1.29
CPSF6-202ENST00000435070 TMEM99Q8N816 258 aa6.96□□□□□ -1.29
CPSF6-202ENST00000435070 C17orf47Q8NEP4 570 aa6.96□□□□□ -1.29
CPSF6-202ENST00000435070 OR6T1Q8NGN1 323 aa6.96□□□□□ -1.29
CPSF6-202ENST00000435070 ABCG4Q9H172 646 aa6.96□□□□□ -1.29
CPSF6-202ENST00000435070 POT1Q9NUX5 634 aa6.96□□□□□ -1.29
CPSF6-202ENST00000435070 ASF1AQ9Y294 204 aa6.96□□□□□ -1.29
CPSF6-202ENST00000435070 ANKRD36A6QL64 1941 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 RLFQ13129 1914 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 IGLV3-10A0A075B6K4 115 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 DAPL1A0PJW8 107 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 HIST1H2ABP04908 130 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 ACRV1P26436 265 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 KLF9Q13886 244 aaPredicted RBP6.96□□□□□ -1.3
CPSF6-202ENST00000435070 HIST3H2AQ7L7L0 130 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 LNX2Q8N448 690 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 STK35Q8TDR2 534 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 RXFP4Q8TDU9 374 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 HIST1H2ACQ93077 130 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 C3orf49Q96BT1 292 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 DERL3Q96Q80 235 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 ALG8Q9BVK2 526 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 WSB2Q9NYS7 404 aaPredicted RBP6.96□□□□□ -1.3
CPSF6-202ENST00000435070 RTCAO00442 366 aaKnown RBP6.96□□□□□ -1.3
CPSF6-202ENST00000435070 GAPDHSO14556 408 aaPredicted RBP6.96□□□□□ -1.3
CPSF6-202ENST00000435070 MMP3P08254 477 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 ALPPL2P10696 532 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 FPR3P25089 353 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 SGCAQ16586 387 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 ZDHHC20Q5W0Z9 365 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 RAB12Q6IQ22 244 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 H3F3CQ6NXT2 135 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 CXXC5Q7LFL8 322 aaKnown RBP6.96□□□□□ -1.3
CPSF6-202ENST00000435070 OR1S2Q8NGQ3 325 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 LGALS14Q8TCE9 139 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 GLYATL2Q8WU03 294 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms