RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 PPP4R4Q6NUP7 873 aa14.06□□□□□ -0.16
TREX1-201ENST00000433541 PIGWQ7Z7B1 504 aa14.06□□□□□ -0.16
TREX1-201ENST00000433541 VRK2Q86Y07 508 aa14.06□□□□□ -0.16
TREX1-201ENST00000433541 ANKS4BQ8N8V4 417 aa14.06□□□□□ -0.16
TREX1-201ENST00000433541 C11orf65Q8NCR3 313 aa14.06□□□□□ -0.16
TREX1-201ENST00000433541 CCDC197Q8NCU1 140 aa14.06□□□□□ -0.16
TREX1-201ENST00000433541 OR10Q1Q8NGQ4 319 aa14.06□□□□□ -0.16
TREX1-201ENST00000433541 OR5W2Q8NH69 310 aa14.06□□□□□ -0.16
TREX1-201ENST00000433541 SSC4DQ8WTU2 575 aa14.06□□□□□ -0.16
TREX1-201ENST00000433541 ZBTB8AQ96BR9 441 aa14.06□□□□□ -0.16
TREX1-201ENST00000433541 ARSGQ96EG1 525 aa14.06□□□□□ -0.16
TREX1-201ENST00000433541 ZNF607Q96SK3 696 aa14.06□□□□□ -0.16
TREX1-201ENST00000433541 SPATA5L1Q9BVQ7 753 aa14.06□□□□□ -0.16
TREX1-201ENST00000433541 LAT2Q9GZY6 243 aa14.06□□□□□ -0.16
TREX1-201ENST00000433541 NANOGQ9H9S0 305 aa14.06□□□□□ -0.16
TREX1-201ENST00000433541 EFCAB1Q9HAE3 211 aa14.06□□□□□ -0.16
TREX1-201ENST00000433541 FAM53CQ9NYF3 392 aa14.06□□□□□ -0.16
TREX1-201ENST00000433541 MEMO1Q9Y316 297 aa14.06□□□□□ -0.16
TREX1-201ENST00000433541 E9PLN8 166 aa14.05□□□□□ -0.16
TREX1-201ENST00000433541 NDUFAB1O14561 156 aa14.05□□□□□ -0.16
TREX1-201ENST00000433541 ADAM10O14672 748 aa14.05□□□□□ -0.16
TREX1-201ENST00000433541 PGM3O95394 542 aa14.05□□□□□ -0.16
TREX1-201ENST00000433541 BMP2P12643 396 aa14.05□□□□□ -0.16
TREX1-201ENST00000433541 PEPDP12955 493 aa14.05□□□□□ -0.16
TREX1-201ENST00000433541 NID1P14543 1247 aa14.05□□□□□ -0.16
TREX1-201ENST00000433541 UQCRBP14927 111 aa14.05□□□□□ -0.16
TREX1-201ENST00000433541 MXRA7P84157 204 aa14.05□□□□□ -0.16
TREX1-201ENST00000433541 FOXF1Q12946 379 aa14.05□□□□□ -0.16
TREX1-201ENST00000433541 SKP2Q13309 424 aa14.05□□□□□ -0.16
TREX1-201ENST00000433541 QPRTQ15274 297 aa14.05□□□□□ -0.16
TREX1-201ENST00000433541 PLPPR5Q32ZL2 321 aa14.05□□□□□ -0.16
TREX1-201ENST00000433541 GLYR1Q49A26 553 aaPredicted RBP14.05□□□□□ -0.16
TREX1-201ENST00000433541 RABL3Q5HYI8 236 aa14.05□□□□□ -0.16
TREX1-201ENST00000433541 ZNF311Q5JNZ3 666 aa14.05□□□□□ -0.16
TREX1-201ENST00000433541 MRPL2Q5T653 305 aaKnown RBP14.05□□□□□ -0.16
TREX1-201ENST00000433541 C1orf185Q5T7R7 199 aa14.05□□□□□ -0.16
TREX1-201ENST00000433541 TMEM211Q6ICI0 200 aa14.05□□□□□ -0.16
TREX1-201ENST00000433541 POMZP3Q6PJE2 187 aa14.05□□□□□ -0.16
TREX1-201ENST00000433541 B3GNT6Q6ZMB0 384 aa14.05□□□□□ -0.16
TREX1-201ENST00000433541 NCCRP1Q6ZVX7 275 aaPredicted RBP14.05□□□□□ -0.16
TREX1-201ENST00000433541 TREML1Q86YW5 311 aa14.05□□□□□ -0.16
TREX1-201ENST00000433541 CMIPQ8IY22 773 aa14.05□□□□□ -0.16
TREX1-201ENST00000433541 ULK2Q8IYT8 1036 aa14.05□□□□□ -0.16
TREX1-201ENST00000433541 C10orf111Q8N326 155 aa14.05□□□□□ -0.16
TREX1-201ENST00000433541 MEIOBQ8N635 442 aa14.05□□□□□ -0.16
TREX1-201ENST00000433541 METTL25Q8N6Q8 603 aa14.05□□□□□ -0.16
TREX1-201ENST00000433541 HIPK4Q8NE63 616 aa14.05□□□□□ -0.16
TREX1-201ENST00000433541 OR8J3Q8NGG0 315 aa14.05□□□□□ -0.16
TREX1-201ENST00000433541 SLC26A7Q8TE54 656 aa14.05□□□□□ -0.16
TREX1-201ENST00000433541 RELTQ969Z4 430 aa14.05□□□□□ -0.16
TREX1-201ENST00000433541 RNF145Q96MT1 663 aa14.05□□□□□ -0.16
TREX1-201ENST00000433541 TRIB1Q96RU8 372 aa14.05□□□□□ -0.16
TREX1-201ENST00000433541 VKORC1Q9BQB6 163 aa14.05□□□□□ -0.16
TREX1-201ENST00000433541 MYLK2Q9H1R3 596 aa14.05□□□□□ -0.16
TREX1-201ENST00000433541 TMEM185BQ9H7F4 350 aa14.05□□□□□ -0.16
TREX1-201ENST00000433541 SLC13A4Q9UKG4 626 aa14.05□□□□□ -0.16
TREX1-201ENST00000433541 ICAM5Q9UMF0 924 aa14.05□□□□□ -0.16
TREX1-201ENST00000433541 ZNF443Q9Y2A4 671 aaPredicted RBP14.05□□□□□ -0.16
TREX1-201ENST00000433541 IFT52Q9Y366 437 aa14.05□□□□□ -0.16
TREX1-201ENST00000433541 LINC01387J3KSC0 135 aa14.04□□□□□ -0.16
TREX1-201ENST00000433541 ZG16O60844 167 aa14.04□□□□□ -0.16
TREX1-201ENST00000433541 SHOX2O60902 331 aaPredicted RBP14.04□□□□□ -0.16
TREX1-201ENST00000433541 SERPINB7O75635 380 aa14.04□□□□□ -0.16
TREX1-201ENST00000433541 LINGO3P0C6S8 592 aa14.04□□□□□ -0.16
TREX1-201ENST00000433541 ZNF17P17021 662 aa14.04□□□□□ -0.16
TREX1-201ENST00000433541 PGM1P36871 562 aa14.04□□□□□ -0.16
TREX1-201ENST00000433541 ADH7P40394 386 aa14.04□□□□□ -0.16
TREX1-201ENST00000433541 EIF1P41567 113 aaKnown RBP14.04□□□□□ -0.16
TREX1-201ENST00000433541 SLC6A8P48029 635 aa14.04□□□□□ -0.16
TREX1-201ENST00000433541 CPA2P48052 419 aa14.04□□□□□ -0.16
TREX1-201ENST00000433541 SMSP52788 366 aa14.04□□□□□ -0.16
TREX1-201ENST00000433541 GFRA1P56159 465 aa14.04□□□□□ -0.16
TREX1-201ENST00000433541 MAPK11Q15759 364 aa14.04□□□□□ -0.16
TREX1-201ENST00000433541 NHSL2Q5HYW2 709 aa14.04□□□□□ -0.16
TREX1-201ENST00000433541 EMC4Q5J8M3 183 aa14.04□□□□□ -0.16
TREX1-201ENST00000433541 PRAMEF8Q5VWM4 474 aa14.04□□□□□ -0.16
TREX1-201ENST00000433541 PRAMEF7Q5VXH5 474 aa14.04□□□□□ -0.16
TREX1-201ENST00000433541 ZNF836Q6ZNA1 936 aa14.04□□□□□ -0.16
TREX1-201ENST00000433541 ARPINQ7Z6K5 226 aa14.04□□□□□ -0.16
TREX1-201ENST00000433541 ATP6V1C2Q8NEY4 427 aa14.04□□□□□ -0.16
TREX1-201ENST00000433541 FBXO27Q8NI29 283 aa14.04□□□□□ -0.16
TREX1-201ENST00000433541 TMEM234Q8WY98 164 aa14.04□□□□□ -0.16
TREX1-201ENST00000433541 CNOT9Q92600 299 aaKnown RBP14.04□□□□□ -0.16
TREX1-201ENST00000433541 CCDC120Q96HB5 630 aa14.04□□□□□ -0.16
TREX1-201ENST00000433541 TMEM38AQ9H6F2 299 aa14.04□□□□□ -0.16
TREX1-201ENST00000433541 KAT8Q9H7Z6 458 aaKnown RBP14.04□□□□□ -0.16
TREX1-201ENST00000433541 COQ3Q9NZJ6 369 aa14.04□□□□□ -0.16
TREX1-201ENST00000433541 ZNF337Q9Y3M9 751 aa14.04□□□□□ -0.16
TREX1-201ENST00000433541 GPC6Q9Y625 555 aaPredicted RBP14.04□□□□□ -0.16
TREX1-201ENST00000433541 GMEB1Q9Y692 573 aa14.04□□□□□ -0.16
TREX1-201ENST00000433541 DSPPQ9NZW4 1301 aa14.04□□□□□ -0.16
TREX1-201ENST00000433541 AHRRA9YTQ3 701 aa14.03□□□□□ -0.16
TREX1-201ENST00000433541 FXYD1O00168 92 aa14.03□□□□□ -0.16
TREX1-201ENST00000433541 EIF1AYO14602 144 aaKnown RBP14.03□□□□□ -0.16
TREX1-201ENST00000433541 OPN1LWP04000 364 aa14.03□□□□□ -0.16
TREX1-201ENST00000433541 THBS1P07996 1170 aa14.03□□□□□ -0.16
TREX1-201ENST00000433541 HOXD4P09016 255 aaPredicted RBP14.03□□□□□ -0.16
TREX1-201ENST00000433541 PABPC4LP0CB38 370 aaKnown RBP14.03□□□□□ -0.16
TREX1-201ENST00000433541 GP1BBP13224 206 aa14.03□□□□□ -0.16
TREX1-201ENST00000433541 RPS4Y1P22090 263 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms