RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 KDELC1Q6UW63 502 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 SERPINA9Q86WD7 417 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 LINC01561Q8N1V8 128 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 POM121L12Q8N7R1 296 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 C15orf54Q8N8G6 183 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 ANKFN1Q8N957 763 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 OR9A4Q8NGU2 314 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 ADAMTS16Q8TE57 1224 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 TBCKQ8TEA7 893 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 ARNTL2Q8WYA1 636 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 SLC41A3Q96GZ6 507 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 SENP8Q96LD8 212 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 ATOH8Q96SQ7 321 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 PSMB7Q99436 277 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 CITED1Q99966 193 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 SOSTQ9BQB4 213 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 IMPAD1Q9NX62 359 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 ELOVL2Q9NXB9 296 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 DHRS4-AS1Q9P1J3 65 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 WRAP73Q9P2S5 460 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 XPO7Q9UIA9 1087 aaKnown RBP2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 RASD1Q9Y272 281 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 MRPS33Q9Y291 106 aaKnown RBP2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 OR10H1Q9Y4A9 318 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 CSAG2Q9Y5P2 127 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 ADCY9O60503 1353 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 EIF3AQ14152 1382 aaKnown RBP2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 KIAA0232Q92628 1395 aa2.43□□□□□ -2.02
HMGB1P27-201ENST00000431429 TMEM131LA2VDJ0 1609 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 NRKQ7Z2Y5 1582 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 NUP155O75694 1391 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 ABCC11Q96J66 1382 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 PLEKHG2Q9H7P9 1386 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 IGKV3D-15A0A087WSY6 115 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 A0A1B0GU03 582 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 A0A1W2PQ72 361 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 CLRN2A0PK11 232 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 FAM74A7A6NL05 159 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 A8MUI8 341 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 K7ENP7 123 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 SAP18O00422 153 aaKnown RBP2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 CASKO14936 926 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 STX7O15400 261 aaKnown RBP2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 TSC22D2O75157 780 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 SNNO75324 88 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 TRIM3O75382 744 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 GJB5O95377 273 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 ADCY5O95622 1261 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 OPN1MWP04001 364 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 OPN1MW2P0DN77 364 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 OPN1MW3P0DN78 364 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 LAMP1P11279 417 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 UQCRC2P22695 453 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 CDH5P33151 784 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 CHI3L1P36222 383 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 BDKRB1P46663 353 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 ARHGDIBP52566 201 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 PLA2G16P53816 162 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 EWSR1Q01844 656 aaKnown RBP eCLIP2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 RIPPLY1Q0D2K3 151 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 PJVKQ0ZLH3 352 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 ZNF154Q13106 437 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 IL18R1Q13478 541 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 ABRAXAS2Q15018 415 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 SYPL1Q16563 259 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 PPP1R3AQ16821 1122 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 SLC5A12Q1EHB4 618 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 FAM74A3Q4VXF1 159 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 CEP55Q53EZ4 464 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 CENPPQ6IPU0 288 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 UFSP1Q6NVU6 142 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 CASC1Q6TDU7 716 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 GCNT7Q6ZNI0 430 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 SLC25A42Q86VD7 318 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 IFNEQ86WN2 208 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 TMEM17Q86X19 198 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 C9orf40Q8IXQ3 194 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 ZNF679Q8IYX0 411 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 ZNF683Q8IZ20 524 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 SLC22A18ASQ8N1D0 253 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 LRRC43Q8N309 656 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 ZCCHC7Q8N3Z6 543 aaKnown RBP2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 RFESDQ8TAC1 157 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 RASL10AQ92737 203 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 RPL3LQ92901 407 aaKnown RBP2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 BADQ92934 168 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 MYLPFQ96A32 169 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 COQ2Q96H96 371 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 TMEM80Q96HE8 168 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 PSKH2Q96QS6 385 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 DUSP16Q9BY84 665 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 ELOVL3Q9HB03 270 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 SIGLEC8Q9NYZ4 499 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 PIPOXQ9P0Z9 390 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 MOB4Q9Y3A3 225 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 L3MBTL1Q9Y468 752 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 USP32Q8NFA0 1604 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 USP6P35125 1406 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 NAIPQ13075 1403 aa2.42□□□□□ -2.02
HMGB1P27-201ENST00000431429 ANKRD50Q9ULJ7 1429 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms