RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 TGIF1Q15583 401 aa16.71■□□□□ 0.27
HMGN1-206ENST00000431390 MICAQ29983 383 aa16.71■□□□□ 0.27
HMGN1-206ENST00000431390 EXOC3L2Q2M3D2 409 aa16.71■□□□□ 0.27
HMGN1-206ENST00000431390 DESI1Q6ICB0 168 aa16.71■□□□□ 0.27
HMGN1-206ENST00000431390 H3F3CQ6NXT2 135 aa16.71■□□□□ 0.27
HMGN1-206ENST00000431390 APOOLQ6UXV4 268 aa16.71■□□□□ 0.27
HMGN1-206ENST00000431390 PLEKHM3Q6ZWE6 761 aa16.71■□□□□ 0.27
HMGN1-206ENST00000431390 TSPYL5Q86VY4 417 aaPredicted RBP16.71■□□□□ 0.27
HMGN1-206ENST00000431390 DND1Q8IYX4 353 aaKnown RBP16.71■□□□□ 0.27
HMGN1-206ENST00000431390 SLC5A8Q8N695 610 aa16.71■□□□□ 0.27
HMGN1-206ENST00000431390 OR52J3Q8NH60 311 aa16.71■□□□□ 0.27
HMGN1-206ENST00000431390 PHOSPHO1Q8TCT1 267 aa16.71■□□□□ 0.27
HMGN1-206ENST00000431390 MAGEE2Q8TD90 523 aaPredicted RBP16.71■□□□□ 0.27
HMGN1-206ENST00000431390 GIPC3Q8TF64 312 aa16.71■□□□□ 0.27
HMGN1-206ENST00000431390 KCNE4Q8WWG9 221 aa16.71■□□□□ 0.27
HMGN1-206ENST00000431390 TBL1XR1Q9BZK7 514 aa16.71■□□□□ 0.27
HMGN1-206ENST00000431390 RHCGQ9UBD6 479 aa16.71■□□□□ 0.27
HMGN1-206ENST00000431390 C15orf41Q9Y2V0 281 aa16.71■□□□□ 0.27
HMGN1-206ENST00000431390 ARRDC5A6NEK1 342 aa16.7■□□□□ 0.26
HMGN1-206ENST00000431390 CPSF4LA6NMK7 179 aaKnown RBP16.7■□□□□ 0.26
HMGN1-206ENST00000431390 PYCARD-AS1I3L0S3 204 aa16.7■□□□□ 0.26
HMGN1-206ENST00000431390 KLK10O43240 276 aa16.7■□□□□ 0.26
HMGN1-206ENST00000431390 ITGA10O75578 1167 aa16.7■□□□□ 0.26
HMGN1-206ENST00000431390 UBTFL6P0CB48 400 aaPredicted RBP16.7■□□□□ 0.26
HMGN1-206ENST00000431390 THRBP10828 461 aa16.7■□□□□ 0.26
HMGN1-206ENST00000431390 PRG2P13727 222 aa16.7■□□□□ 0.26
HMGN1-206ENST00000431390 CLK3P49761 638 aaKnown RBP16.7■□□□□ 0.26
HMGN1-206ENST00000431390 UCNP55089 124 aa16.7■□□□□ 0.26
HMGN1-206ENST00000431390 FBXW4P57775 412 aa16.7■□□□□ 0.26
HMGN1-206ENST00000431390 MLF1P58340 268 aa16.7■□□□□ 0.26
HMGN1-206ENST00000431390 HOXC5Q00444 222 aa16.7■□□□□ 0.26
HMGN1-206ENST00000431390 Q0VFX4 171 aa16.7■□□□□ 0.26
HMGN1-206ENST00000431390 LY6DQ14210 128 aa16.7■□□□□ 0.26
HMGN1-206ENST00000431390 CD226Q15762 336 aa16.7■□□□□ 0.26
HMGN1-206ENST00000431390 NTRK2Q16620 822 aa16.7■□□□□ 0.26
HMGN1-206ENST00000431390 JMJD6Q6NYC1 403 aaPredicted RBP16.7■□□□□ 0.26
HMGN1-206ENST00000431390 RPS19BP1Q86WX3 136 aaKnown RBP16.7■□□□□ 0.26
HMGN1-206ENST00000431390 TOR1AIP2Q8NFQ8 470 aa16.7■□□□□ 0.26
HMGN1-206ENST00000431390 ADAMTS16Q8TE57 1224 aa16.7■□□□□ 0.26
HMGN1-206ENST00000431390 RNF138Q8WVD3 245 aa16.7■□□□□ 0.26
HMGN1-206ENST00000431390 SPACA9Q96E40 222 aaPredicted RBP16.7■□□□□ 0.26
HMGN1-206ENST00000431390 RDH12Q96NR8 316 aa16.7■□□□□ 0.26
HMGN1-206ENST00000431390 ALPK1Q96QP1 1244 aa16.7■□□□□ 0.26
HMGN1-206ENST00000431390 BARD1Q99728 777 aaKnown RBP16.7■□□□□ 0.26
HMGN1-206ENST00000431390 FUZQ9BT04 418 aa16.7■□□□□ 0.26
HMGN1-206ENST00000431390 TMCC3Q9ULS5 477 aa16.7■□□□□ 0.26
HMGN1-206ENST00000431390 C7orf72A4D263 438 aa16.69■□□□□ 0.26
HMGN1-206ENST00000431390 FAAHO00519 579 aa16.69■□□□□ 0.26
HMGN1-206ENST00000431390 ZNF264O43296 627 aa16.69■□□□□ 0.26
HMGN1-206ENST00000431390 CYP7B1O75881 506 aa16.69■□□□□ 0.26
HMGN1-206ENST00000431390 CCNB2O95067 398 aa16.69■□□□□ 0.26
HMGN1-206ENST00000431390 PRKACGP22612 351 aa16.69■□□□□ 0.26
HMGN1-206ENST00000431390 HTR2AP28223 471 aa16.69■□□□□ 0.26
HMGN1-206ENST00000431390 ACAA2P42765 397 aaKnown RBP16.69■□□□□ 0.26
HMGN1-206ENST00000431390 EPS8Q12929 822 aa16.69■□□□□ 0.26
HMGN1-206ENST00000431390 TRAM2Q15035 370 aa16.69■□□□□ 0.26
HMGN1-206ENST00000431390 FGD3Q5JSP0 725 aa16.69■□□□□ 0.26
HMGN1-206ENST00000431390 DCST1Q5T197 706 aa16.69■□□□□ 0.26
HMGN1-206ENST00000431390 OPN5Q6U736 354 aa16.69■□□□□ 0.26
HMGN1-206ENST00000431390 MISPQ8IVT2 679 aa16.69■□□□□ 0.26
HMGN1-206ENST00000431390 LSMEM1Q8N8F7 131 aa16.69■□□□□ 0.26
HMGN1-206ENST00000431390 WBP1Q96G27 269 aa16.69■□□□□ 0.26
HMGN1-206ENST00000431390 PRR14Q9BWN1 585 aa16.69■□□□□ 0.26
HMGN1-206ENST00000431390 CDCP1Q9H5V8 836 aa16.69■□□□□ 0.26
HMGN1-206ENST00000431390 MAN2C1Q9NTJ4 1040 aa16.69■□□□□ 0.26
HMGN1-206ENST00000431390 TRAPPC13A5PLN9 417 aa16.68■□□□□ 0.26
HMGN1-206ENST00000431390 GTPBP1O00178 669 aaKnown RBP16.68■□□□□ 0.26
HMGN1-206ENST00000431390 NDUFB5O43674 189 aa16.68■□□□□ 0.26
HMGN1-206ENST00000431390 EIF4E2O60573 245 aaKnown RBP16.68■□□□□ 0.26
HMGN1-206ENST00000431390 ANXA8P13928 327 aa16.68■□□□□ 0.26
HMGN1-206ENST00000431390 FUT4P22083 530 aa16.68■□□□□ 0.26
HMGN1-206ENST00000431390 SKP2Q13309 424 aa16.68■□□□□ 0.26
HMGN1-206ENST00000431390 LAPTM4AQ15012 233 aa16.68■□□□□ 0.26
HMGN1-206ENST00000431390 OR1Q1Q15612 314 aa16.68■□□□□ 0.26
HMGN1-206ENST00000431390 ZNF791Q3KP31 576 aaPredicted RBP16.68■□□□□ 0.26
HMGN1-206ENST00000431390 DCAF10Q5QP82 559 aa16.68■□□□□ 0.26
HMGN1-206ENST00000431390 FAHD1Q6P587 224 aa16.68■□□□□ 0.26
HMGN1-206ENST00000431390 ZNF613Q6PF04 617 aa16.68■□□□□ 0.26
HMGN1-206ENST00000431390 LINC00471Q8N535 108 aa16.68■□□□□ 0.26
HMGN1-206ENST00000431390 GATSQ8NAP1 163 aa16.68■□□□□ 0.26
HMGN1-206ENST00000431390 OR10G2Q8NGC3 310 aa16.68■□□□□ 0.26
HMGN1-206ENST00000431390 SLC7A13Q8TCU3 470 aa16.68■□□□□ 0.26
HMGN1-206ENST00000431390 SLC41A3Q96GZ6 507 aa16.68■□□□□ 0.26
HMGN1-206ENST00000431390 FER1L6-AS2Q96M78 137 aa16.68■□□□□ 0.26
HMGN1-206ENST00000431390 NODALQ96S42 347 aa16.68■□□□□ 0.26
HMGN1-206ENST00000431390 OSBPL11Q9BXB4 747 aa16.68■□□□□ 0.26
HMGN1-206ENST00000431390 TRIM2Q9C040 744 aa16.68■□□□□ 0.26
HMGN1-206ENST00000431390 LAT2Q9GZY6 243 aa16.68■□□□□ 0.26
HMGN1-206ENST00000431390 SMURF2Q9HAU4 748 aa16.68■□□□□ 0.26
HMGN1-206ENST00000431390 TMEM27Q9HBJ8 222 aa16.68■□□□□ 0.26
HMGN1-206ENST00000431390 CTPS2Q9NRF8 586 aa16.68■□□□□ 0.26
HMGN1-206ENST00000431390 SMPD3Q9NY59 655 aaPredicted RBP16.68■□□□□ 0.26
HMGN1-206ENST00000431390 RAB26Q9ULW5 256 aa16.68■□□□□ 0.26
HMGN1-206ENST00000431390 TRBV4-1A0A0J9YWV2 114 aa16.68■□□□□ 0.26
HMGN1-206ENST00000431390 DLGAP1O14490 977 aa16.68■□□□□ 0.26
HMGN1-206ENST00000431390 ANGPTL1O95841 491 aa16.68■□□□□ 0.26
HMGN1-206ENST00000431390 ACADSP16219 412 aa16.68■□□□□ 0.26
HMGN1-206ENST00000431390 SOX3P41225 446 aa16.68■□□□□ 0.26
HMGN1-206ENST00000431390 SSR4P51571 173 aa16.68■□□□□ 0.26
HMGN1-206ENST00000431390 RFX4Q33E94 735 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms