RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 UBE2UQ5VVX9 321 aa15.35■□□□□ 0.05
USHBP1-203ENST00000431146 TCEAL6Q6IPX3 200 aa15.35■□□□□ 0.05
USHBP1-203ENST00000431146 ZNF620Q6ZNG0 422 aa15.35■□□□□ 0.05
USHBP1-203ENST00000431146 GRAMD2AQ8IUY3 354 aa15.35■□□□□ 0.05
USHBP1-203ENST00000431146 TRUB1Q8WWH5 349 aaKnown RBP15.35■□□□□ 0.05
USHBP1-203ENST00000431146 TCEAL3Q969E4 200 aa15.35■□□□□ 0.05
USHBP1-203ENST00000431146 YIPF6Q96EC8 236 aa15.35■□□□□ 0.05
USHBP1-203ENST00000431146 SLC46A1Q96NT5 459 aa15.35■□□□□ 0.05
USHBP1-203ENST00000431146 MKKSQ9NPJ1 570 aaPredicted RBP15.35■□□□□ 0.05
USHBP1-203ENST00000431146 ZNF223Q9UK11 482 aaPredicted RBP15.35■□□□□ 0.05
USHBP1-203ENST00000431146 A0A0B4J2E0 115 aa15.35■□□□□ 0.05
USHBP1-203ENST00000431146 A0A1B0GX12 115 aa15.35■□□□□ 0.05
USHBP1-203ENST00000431146 EFCAB10A6NFE3 127 aa15.35■□□□□ 0.05
USHBP1-203ENST00000431146 SCRG1O75711 98 aa15.35■□□□□ 0.05
USHBP1-203ENST00000431146 ANKRD34CP0C6C1 535 aa15.35■□□□□ 0.05
USHBP1-203ENST00000431146 LIPAP38571 399 aa15.35■□□□□ 0.05
USHBP1-203ENST00000431146 STAT5AP42229 794 aa15.35■□□□□ 0.05
USHBP1-203ENST00000431146 ZNF91Q05481 1191 aa15.35■□□□□ 0.05
USHBP1-203ENST00000431146 HSDL2Q6YN16 418 aa15.35■□□□□ 0.05
USHBP1-203ENST00000431146 ANKRD13BQ86YJ7 626 aa15.35■□□□□ 0.05
USHBP1-203ENST00000431146 C9orf40Q8IXQ3 194 aa15.35■□□□□ 0.05
USHBP1-203ENST00000431146 TOR1AIP2Q8NFQ8 470 aa15.35■□□□□ 0.05
USHBP1-203ENST00000431146 STT3BQ8TCJ2 826 aa15.35■□□□□ 0.05
USHBP1-203ENST00000431146 NAT6Q93015 286 aa15.35■□□□□ 0.05
USHBP1-203ENST00000431146 SAMD8Q96LT4 415 aa15.35■□□□□ 0.05
USHBP1-203ENST00000431146 CTRCQ99895 268 aa15.35■□□□□ 0.05
USHBP1-203ENST00000431146 MEPEQ9NQ76 525 aaPredicted RBP15.35■□□□□ 0.05
USHBP1-203ENST00000431146 OCIAD1Q9NX40 245 aa15.35■□□□□ 0.05
USHBP1-203ENST00000431146 SRPK3Q9UPE1 567 aa15.35■□□□□ 0.05
USHBP1-203ENST00000431146 SERINC4A6NH21 518 aa15.34■□□□□ 0.05
USHBP1-203ENST00000431146 M0R082 166 aa15.34■□□□□ 0.05
USHBP1-203ENST00000431146 POLR1CO15160 346 aaPredicted RBP15.34■□□□□ 0.05
USHBP1-203ENST00000431146 CER1O95813 267 aa15.34■□□□□ 0.05
USHBP1-203ENST00000431146 NGFRP08138 427 aa15.34■□□□□ 0.05
USHBP1-203ENST00000431146 DBTP11182 482 aaKnown RBP15.34■□□□□ 0.05
USHBP1-203ENST00000431146 PPICP45877 212 aa15.34■□□□□ 0.05
USHBP1-203ENST00000431146 EFNB1P98172 346 aa15.34■□□□□ 0.05
USHBP1-203ENST00000431146 DOC2BQ14184 412 aa15.34■□□□□ 0.05
USHBP1-203ENST00000431146 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.34■□□□□ 0.05
USHBP1-203ENST00000431146 ALG10BQ5I7T1 473 aa15.34■□□□□ 0.05
USHBP1-203ENST00000431146 YOD1Q5VVQ6 348 aaPredicted RBP15.34■□□□□ 0.05
USHBP1-203ENST00000431146 ADIPOR1Q96A54 375 aa15.34■□□□□ 0.05
USHBP1-203ENST00000431146 Q96MT0 163 aa15.34■□□□□ 0.05
USHBP1-203ENST00000431146 ZNF582Q96NG8 517 aaPredicted RBP15.34■□□□□ 0.05
USHBP1-203ENST00000431146 POLR2J2Q9GZM3 115 aaKnown RBP15.34■□□□□ 0.05
USHBP1-203ENST00000431146 ENKD1Q9H0I2 346 aa15.34■□□□□ 0.05
USHBP1-203ENST00000431146 IL20Q9NYY1 176 aa15.34■□□□□ 0.05
USHBP1-203ENST00000431146 CNOT2Q9NZN8 540 aaKnown RBP15.34■□□□□ 0.05
USHBP1-203ENST00000431146 COL5A1P20908 1838 aaPredicted RBP15.34■□□□□ 0.05
USHBP1-203ENST00000431146 C2orf92A0A1B0GVN3 265 aa15.34■□□□□ 0.05
USHBP1-203ENST00000431146 TRIM64BA6NI03 449 aa15.34■□□□□ 0.05
USHBP1-203ENST00000431146 YKT6O15498 198 aa15.34■□□□□ 0.05
USHBP1-203ENST00000431146 APOL3O95236 402 aa15.34■□□□□ 0.05
USHBP1-203ENST00000431146 SLC2A10O95528 541 aa15.34■□□□□ 0.05
USHBP1-203ENST00000431146 GUSBP08236 651 aa15.34■□□□□ 0.05
USHBP1-203ENST00000431146 HSMCR30P0CW71 290 aa15.34■□□□□ 0.05
USHBP1-203ENST00000431146 CD36P16671 472 aa15.34■□□□□ 0.05
USHBP1-203ENST00000431146 TGFBR2P37173 567 aa15.34■□□□□ 0.05
USHBP1-203ENST00000431146 CBX3Q13185 183 aa15.34■□□□□ 0.05
USHBP1-203ENST00000431146 CD226Q15762 336 aa15.34■□□□□ 0.05
USHBP1-203ENST00000431146 TIGD6Q17RP2 521 aa15.34■□□□□ 0.05
USHBP1-203ENST00000431146 PLAG1Q6DJT9 500 aa15.34■□□□□ 0.05
USHBP1-203ENST00000431146 ZNF613Q6PF04 617 aa15.34■□□□□ 0.05
USHBP1-203ENST00000431146 KIRREL2Q6UWL6 708 aa15.34■□□□□ 0.05
USHBP1-203ENST00000431146 FAM26EQ8N5C1 309 aa15.34■□□□□ 0.05
USHBP1-203ENST00000431146 CEP76Q8TAP6 659 aa15.34■□□□□ 0.05
USHBP1-203ENST00000431146 OSTF1Q92882 214 aa15.34■□□□□ 0.05
USHBP1-203ENST00000431146 RPL3LQ92901 407 aaKnown RBP15.34■□□□□ 0.05
USHBP1-203ENST00000431146 FGF11Q92914 225 aa15.34■□□□□ 0.05
USHBP1-203ENST00000431146 LCORQ96JN0 433 aaPredicted RBP15.34■□□□□ 0.05
USHBP1-203ENST00000431146 OR5M11Q96RB7 305 aa15.34■□□□□ 0.05
USHBP1-203ENST00000431146 ADOQ96SZ5 270 aa15.34■□□□□ 0.05
USHBP1-203ENST00000431146 GPN2Q9H9Y4 310 aaPredicted RBP15.34■□□□□ 0.05
USHBP1-203ENST00000431146 C14orf105Q9NVL8 296 aa15.34■□□□□ 0.05
USHBP1-203ENST00000431146 SIDT1Q9NXL6 827 aaKnown RBP15.34■□□□□ 0.05
USHBP1-203ENST00000431146 RARRES3Q9UL19 164 aa15.34■□□□□ 0.05
USHBP1-203ENST00000431146 GPR179Q6PRD1 2367 aa15.34■□□□□ 0.05
USHBP1-203ENST00000431146 MPDZO75970 2070 aa15.33■□□□□ 0.05
USHBP1-203ENST00000431146 UNC119BA6NIH7 251 aa15.33■□□□□ 0.04
USHBP1-203ENST00000431146 OIP5O43482 229 aa15.33■□□□□ 0.04
USHBP1-203ENST00000431146 CHP2O43745 196 aa15.33■□□□□ 0.04
USHBP1-203ENST00000431146 ZGLP1P0C6A0 271 aa15.33■□□□□ 0.04
USHBP1-203ENST00000431146 CKMT1AP12532 417 aa15.33■□□□□ 0.04
USHBP1-203ENST00000431146 TGFBR1P36897 503 aa15.33■□□□□ 0.04
USHBP1-203ENST00000431146 NR0B1P51843 470 aaKnown RBP15.33■□□□□ 0.04
USHBP1-203ENST00000431146 FXYD6P3P58550 94 aa15.33■□□□□ 0.04
USHBP1-203ENST00000431146 VBP1P61758 197 aa15.33■□□□□ 0.04
USHBP1-203ENST00000431146 DBPQ10586 325 aaPredicted RBP15.33■□□□□ 0.04
USHBP1-203ENST00000431146 IRF3Q14653 427 aa15.33■□□□□ 0.04
USHBP1-203ENST00000431146 OCLNQ16625 522 aa15.33■□□□□ 0.04
USHBP1-203ENST00000431146 NKAIN1Q4KMZ8 207 aa15.33■□□□□ 0.04
USHBP1-203ENST00000431146 KLHL26Q53HC5 615 aa15.33■□□□□ 0.04
USHBP1-203ENST00000431146 APOOLQ6UXV4 268 aa15.33■□□□□ 0.04
USHBP1-203ENST00000431146 RABEPKQ7Z6M1 372 aa15.33■□□□□ 0.04
USHBP1-203ENST00000431146 P2RY8Q86VZ1 359 aa15.33■□□□□ 0.04
USHBP1-203ENST00000431146 OR13C2Q8NGS9 318 aa15.33■□□□□ 0.04
USHBP1-203ENST00000431146 WDR36Q8NI36 951 aaKnown RBP15.33■□□□□ 0.04
USHBP1-203ENST00000431146 TMEM163Q8TC26 289 aa15.33■□□□□ 0.04
USHBP1-203ENST00000431146 DAZLQ92904 295 aaKnown RBP15.33■□□□□ 0.04
USHBP1-203ENST00000431146 BPIFA2Q96DR5 249 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms