RNA–Protein interactions for RNA: ENST00000430142.5

TOP3B-204, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-204ENST00000430142 COX18Q8N8Q8 333 aa13.37□□□□□ -0.27
TOP3B-204ENST00000430142 CLHC1Q8NHS4 586 aa13.37□□□□□ -0.27
TOP3B-204ENST00000430142 TCP10LQ8TDR4 215 aa13.37□□□□□ -0.27
TOP3B-204ENST00000430142 HSD17B8Q92506 261 aa13.37□□□□□ -0.27
TOP3B-204ENST00000430142 GTPBP3Q969Y2 492 aaKnown RBP13.37□□□□□ -0.27
TOP3B-204ENST00000430142 REXO5Q96IC2 774 aaKnown RBP13.37□□□□□ -0.27
TOP3B-204ENST00000430142 TSSK3Q96PN8 268 aa13.37□□□□□ -0.27
TOP3B-204ENST00000430142 CCT7Q99832 543 aa13.37□□□□□ -0.27
TOP3B-204ENST00000430142 ESRP2Q9H6T0 727 aaKnown RBP13.37□□□□□ -0.27
TOP3B-204ENST00000430142 TIGARQ9NQ88 270 aa13.37□□□□□ -0.27
TOP3B-204ENST00000430142 KLHL13Q9P2N7 655 aa13.37□□□□□ -0.27
TOP3B-204ENST00000430142 LIPT1Q9Y234 373 aa13.37□□□□□ -0.27
TOP3B-204ENST00000430142 FIS1Q9Y3D6 152 aa13.37□□□□□ -0.27
TOP3B-204ENST00000430142 MAGED1Q9Y5V3 778 aaPredicted RBP13.37□□□□□ -0.27
TOP3B-204ENST00000430142 SONP18583 2426 aaKnown RBP13.37□□□□□ -0.27
TOP3B-204ENST00000430142 A0A1W2PQD3 144 aa13.36□□□□□ -0.27
TOP3B-204ENST00000430142 ZNF195O14628 629 aa13.36□□□□□ -0.27
TOP3B-204ENST00000430142 OIP5O43482 229 aa13.36□□□□□ -0.27
TOP3B-204ENST00000430142 RGS14O43566 566 aa13.36□□□□□ -0.27
TOP3B-204ENST00000430142 TYROBPO43914 113 aa13.36□□□□□ -0.27
TOP3B-204ENST00000430142 LINC00032P0C843 101 aa13.36□□□□□ -0.27
TOP3B-204ENST00000430142 ADH6P28332 368 aa13.36□□□□□ -0.27
TOP3B-204ENST00000430142 LCN1P31025 176 aa13.36□□□□□ -0.27
TOP3B-204ENST00000430142 ACVR1BP36896 505 aa13.36□□□□□ -0.27
TOP3B-204ENST00000430142 EIF1P41567 113 aaKnown RBP13.36□□□□□ -0.27
TOP3B-204ENST00000430142 ETV4P43268 484 aa13.36□□□□□ -0.27
TOP3B-204ENST00000430142 ZNF117Q03924 483 aa13.36□□□□□ -0.27
TOP3B-204ENST00000430142 PDE7AQ13946 482 aa13.36□□□□□ -0.27
TOP3B-204ENST00000430142 RNPS1Q15287 305 aaKnown RBP13.36□□□□□ -0.27
TOP3B-204ENST00000430142 ETFDHQ16134 617 aa13.36□□□□□ -0.27
TOP3B-204ENST00000430142 TMEM176BQ3YBM2 270 aaPredicted RBP13.36□□□□□ -0.27
TOP3B-204ENST00000430142 ZNF672Q499Z4 452 aaPredicted RBP13.36□□□□□ -0.27
TOP3B-204ENST00000430142 EXOSC6Q5RKV6 272 aaKnown RBP13.36□□□□□ -0.27
TOP3B-204ENST00000430142 ZCCHC12Q6PEW1 402 aa13.36□□□□□ -0.27
TOP3B-204ENST00000430142 ZCCHC23Q6ZST2 131 aa13.36□□□□□ -0.27
TOP3B-204ENST00000430142 ATP6V1C2Q8NEY4 427 aa13.36□□□□□ -0.27
TOP3B-204ENST00000430142 FBXO27Q8NI29 283 aa13.36□□□□□ -0.27
TOP3B-204ENST00000430142 PHOSPHO1Q8TCT1 267 aa13.36□□□□□ -0.27
TOP3B-204ENST00000430142 JADE3Q92613 823 aa13.36□□□□□ -0.27
TOP3B-204ENST00000430142 CPNE4Q96A23 557 aaPredicted RBP13.36□□□□□ -0.27
TOP3B-204ENST00000430142 TMEM109Q9BVC6 243 aa13.36□□□□□ -0.27
TOP3B-204ENST00000430142 BTBD2Q9BX70 525 aa13.36□□□□□ -0.27
TOP3B-204ENST00000430142 ROPN1BQ9BZX4 212 aaPredicted RBP13.36□□□□□ -0.27
TOP3B-204ENST00000430142 SLCO5A1Q9H2Y9 848 aa13.36□□□□□ -0.27
TOP3B-204ENST00000430142 ROPN1Q9HAT0 212 aaPredicted RBP13.36□□□□□ -0.27
TOP3B-204ENST00000430142 NGBQ9NPG2 151 aa13.36□□□□□ -0.27
TOP3B-204ENST00000430142 ACSS1Q9NUB1 689 aaPredicted RBP13.36□□□□□ -0.27
TOP3B-204ENST00000430142 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.36□□□□□ -0.27
TOP3B-204ENST00000430142 TRAF6Q9Y4K3 522 aa13.36□□□□□ -0.27
TOP3B-204ENST00000430142 V9GYY5 206 aaPredicted RBP13.36□□□□□ -0.27
TOP3B-204ENST00000430142 CHD3Q12873 2000 aaKnown RBP13.35□□□□□ -0.27
TOP3B-204ENST00000430142 DPRXA6NFQ7 191 aa13.35□□□□□ -0.27
TOP3B-204ENST00000430142 ZNF814B7Z6K7 855 aa13.35□□□□□ -0.27
TOP3B-204ENST00000430142 PIP5K1BO14986 540 aa13.35□□□□□ -0.27
TOP3B-204ENST00000430142 NDUFS7O75251 213 aa13.35□□□□□ -0.27
TOP3B-204ENST00000430142 PRKD3O94806 890 aa13.35□□□□□ -0.27
TOP3B-204ENST00000430142 NUDT14O95848 222 aa13.35□□□□□ -0.27
TOP3B-204ENST00000430142 IGHV4-39P01824 125 aa13.35□□□□□ -0.27
TOP3B-204ENST00000430142 TP53P04637 393 aaPredicted RBP13.35□□□□□ -0.27
TOP3B-204ENST00000430142 YES1P07947 543 aa13.35□□□□□ -0.27
TOP3B-204ENST00000430142 NEFHP12036 1026 aa13.35□□□□□ -0.27
TOP3B-204ENST00000430142 RPL38P63173 70 aaKnown RBP13.35□□□□□ -0.27
TOP3B-204ENST00000430142 POU6F2P78424 691 aaPredicted RBP13.35□□□□□ -0.27
TOP3B-204ENST00000430142 BSPH1Q075Z2 132 aa13.35□□□□□ -0.27
TOP3B-204ENST00000430142 FAPQ12884 760 aa13.35□□□□□ -0.27
TOP3B-204ENST00000430142 TOMM34Q15785 309 aaPredicted RBP13.35□□□□□ -0.27
TOP3B-204ENST00000430142 PGGHGQ32M88 737 aa13.35□□□□□ -0.27
TOP3B-204ENST00000430142 XKR7Q5GH72 579 aa13.35□□□□□ -0.27
TOP3B-204ENST00000430142 HMBOX1Q6NT76 420 aa13.35□□□□□ -0.27
TOP3B-204ENST00000430142 CBLN3Q6UW01 205 aa13.35□□□□□ -0.27
TOP3B-204ENST00000430142 LRIG3Q6UXM1 1119 aa13.35□□□□□ -0.27
TOP3B-204ENST00000430142 FCRLAQ7L513 359 aa13.35□□□□□ -0.27
TOP3B-204ENST00000430142 MREGQ8N565 214 aa13.35□□□□□ -0.27
TOP3B-204ENST00000430142 KBTBD8Q8NFY9 601 aa13.35□□□□□ -0.27
TOP3B-204ENST00000430142 PIWIL2Q8TC59 973 aaKnown RBP13.35□□□□□ -0.27
TOP3B-204ENST00000430142 TWIST2Q8WVJ9 160 aa13.35□□□□□ -0.27
TOP3B-204ENST00000430142 CDS1Q92903 461 aa13.35□□□□□ -0.27
TOP3B-204ENST00000430142 KISS1RQ969F8 398 aaPredicted RBP13.35□□□□□ -0.27
TOP3B-204ENST00000430142 FAM120BQ96EK7 910 aaKnown RBP13.35□□□□□ -0.27
TOP3B-204ENST00000430142 CHMP6Q96FZ7 201 aa13.35□□□□□ -0.27
TOP3B-204ENST00000430142 SIRT3Q9NTG7 399 aaPredicted RBP13.35□□□□□ -0.27
TOP3B-204ENST00000430142 GIN1Q9NXP7 522 aa13.35□□□□□ -0.27
TOP3B-204ENST00000430142 GIMAP2Q9UG22 337 aa13.35□□□□□ -0.27
TOP3B-204ENST00000430142 CARD8Q9Y2G2 431 aa13.35□□□□□ -0.27
TOP3B-204ENST00000430142 SNX8Q9Y5X2 465 aa13.35□□□□□ -0.27
TOP3B-204ENST00000430142 IGHV3-15A0A0B4J1V0 119 aa13.34□□□□□ -0.27
TOP3B-204ENST00000430142 NPIPA5A0A0B4J1W7 369 aa13.34□□□□□ -0.27
TOP3B-204ENST00000430142 A0A1W2PP18 115 aa13.34□□□□□ -0.27
TOP3B-204ENST00000430142 NPIPA7E9PJI5 369 aa13.34□□□□□ -0.27
TOP3B-204ENST00000430142 ZNF500O60304 480 aaPredicted RBP13.34□□□□□ -0.27
TOP3B-204ENST00000430142 SLU7O95391 586 aaKnown RBP13.34□□□□□ -0.27
TOP3B-204ENST00000430142 HSPA4LO95757 839 aa13.34□□□□□ -0.27
TOP3B-204ENST00000430142 HMGN2P05204 90 aaKnown RBP13.34□□□□□ -0.27
TOP3B-204ENST00000430142 NPIPA8P0DM63 369 aa13.34□□□□□ -0.27
TOP3B-204ENST00000430142 BCKDHAP12694 445 aa13.34□□□□□ -0.27
TOP3B-204ENST00000430142 ENPP1P22413 925 aa13.34□□□□□ -0.27
TOP3B-204ENST00000430142 ELK4P28324 431 aa13.34□□□□□ -0.27
TOP3B-204ENST00000430142 IFFO1Q0D2I5 559 aa13.34□□□□□ -0.27
TOP3B-204ENST00000430142 ITGADQ13349 1161 aa13.34□□□□□ -0.27
TOP3B-204ENST00000430142 P2RY6Q15077 328 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms