RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 TRAV19A0A0A6YYK7 116 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 ATP6AP2A0A1C7CYW4 349 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 MTMR11A4FU01 709 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 I3L4J1 428 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 CCL24O00175 119 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 OGTO15294 1046 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 B4GALT5O43286 388 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 DFNA5O60443 496 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 PPP1R3DO95685 299 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 CPNE6O95741 557 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 PTBP3O95758 552 aaKnown RBP3.59□□□□□ -1.83
HMGB3-203ENST00000430118 PAK4O96013 591 aaPredicted RBP3.59□□□□□ -1.83
HMGB3-203ENST00000430118 AK1P00568 194 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 NUDT17P0C025 328 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 RHOXF2BP0C7M4 288 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 UBTFL6P0CB48 400 aaPredicted RBP3.59□□□□□ -1.83
HMGB3-203ENST00000430118 SLC1A1P43005 524 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 HAAOP46952 286 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 GSSP48637 474 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 PITPNBP48739 271 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 BCAP31P51572 246 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 ZXDBP98169 803 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 LRRC74AQ0VAA2 488 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 ILKQ13418 452 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 CDH18Q13634 790 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 CEACAM7Q14002 265 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 KRT31Q15323 416 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 SPHARQ15513 63 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 TECRLQ5HYJ1 363 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 ATF7IP2Q5U623 682 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 C1orf189Q5VU69 101 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 SLX4IPQ5VYV7 408 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 C9orf57Q5W0N0 161 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 SPOPLQ6IQ16 392 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 MEX3BQ6ZN04 569 aaKnown RBP3.59□□□□□ -1.83
HMGB3-203ENST00000430118 IDO2Q6ZQW0 420 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 TRPM8Q7Z2W7 1104 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 CDR2LQ86X02 465 aaPredicted RBP3.59□□□□□ -1.83
HMGB3-203ENST00000430118 SLC43A2Q8N370 569 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 CSGALNACT2Q8N6G5 542 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 ALLCQ8N6M5 410 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 MINDY2Q8NBR6 621 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 SLC37A3Q8NCC5 494 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 OR10Z1Q8NGY1 313 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 TBCKQ8TEA7 893 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 UBTD2Q8WUN7 234 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 ZNRF4Q8WWF5 429 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 ZNF606Q8WXB4 792 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 DYRK2Q92630 601 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 WBP2Q969T9 261 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 SGK3Q96BR1 496 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 RAB39BQ96DA2 213 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 DGCR14Q96DF8 476 aaKnown RBP3.59□□□□□ -1.83
HMGB3-203ENST00000430118 CHMP6Q96FZ7 201 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 ZNF274Q96GC6 653 aaPredicted RBP3.59□□□□□ -1.83
HMGB3-203ENST00000430118 ZNF578Q96N58 590 aaPredicted RBP3.59□□□□□ -1.83
HMGB3-203ENST00000430118 ZNF583Q96ND8 569 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 TAAR6Q96RI8 345 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 SECISBP2Q96T21 854 aaKnown RBP3.59□□□□□ -1.83
HMGB3-203ENST00000430118 TSG101Q99816 390 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 RHOXF2Q9BQY4 288 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 FICDQ9BVA6 458 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 SHARPINQ9H0F6 387 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 SIRPDQ9H106 197 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 POLR3FQ9H1D9 316 aaPredicted RBP3.59□□□□□ -1.83
HMGB3-203ENST00000430118 HAUS4Q9H6D7 363 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 C6orf106Q9H6K1 298 aaPredicted RBP3.59□□□□□ -1.83
HMGB3-203ENST00000430118 TMEM231Q9H6L2 316 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 DCLRE1BQ9H816 532 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 PLGRKTQ9HBL7 147 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 C8orf4Q9NR00 106 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 CNOT2Q9NZN8 540 aaKnown RBP3.59□□□□□ -1.83
HMGB3-203ENST00000430118 SLC7A8Q9UHI5 535 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 PSORS1C1Q9UIG5 152 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 NCKAP1Q9Y2A7 1128 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 PCDH15Q96QU1 1955 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 STK36Q9NRP7 1315 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 NBPF19A0A087WUL8 3843 aa3.59□□□□□ -1.84
HMGB3-203ENST00000430118 TNRC6BQ9UPQ9 1833 aaKnown RBP3.58□□□□□ -1.84
HMGB3-203ENST00000430118 NOTCH4Q99466 2003 aa3.58□□□□□ -1.84
HMGB3-203ENST00000430118 BAZ2BQ9UIF8 2168 aaKnown RBP3.58□□□□□ -1.84
HMGB3-203ENST00000430118 SPTA1P02549 2419 aa3.58□□□□□ -1.84
HMGB3-203ENST00000430118 IGHV1OR15-9A0A0B4J2B8 117 aa3.58□□□□□ -1.84
HMGB3-203ENST00000430118 GOLGA8QA0A0J9YX86 632 aa3.58□□□□□ -1.84
HMGB3-203ENST00000430118 SMIM28A0A1B0GU29 152 aa3.58□□□□□ -1.84
HMGB3-203ENST00000430118 FUOMA2VDF0 154 aa3.58□□□□□ -1.84
HMGB3-203ENST00000430118 GOLGA8OA6NCC3 632 aa3.58□□□□□ -1.84
HMGB3-203ENST00000430118 A8MVM7 634 aa3.58□□□□□ -1.84
HMGB3-203ENST00000430118 ZNF732B4DXR9 585 aa3.58□□□□□ -1.84
HMGB3-203ENST00000430118 GOLGA8NF8WBI6 632 aa3.58□□□□□ -1.84
HMGB3-203ENST00000430118 C16orf97H3BN30 126 aa3.58□□□□□ -1.84
HMGB3-203ENST00000430118 OVOL3O00110 214 aa3.58□□□□□ -1.84
HMGB3-203ENST00000430118 NDUFA2O43678 99 aa3.58□□□□□ -1.84
HMGB3-203ENST00000430118 ZBTB11O95625 1053 aaPredicted RBP3.58□□□□□ -1.84
HMGB3-203ENST00000430118 DIRAS3O95661 229 aa3.58□□□□□ -1.84
HMGB3-203ENST00000430118 TSHBP01222 138 aa3.58□□□□□ -1.84
HMGB3-203ENST00000430118 HMGN1P05114 100 aa3.58□□□□□ -1.84
HMGB3-203ENST00000430118 CHRNGP07510 517 aa3.58□□□□□ -1.84
HMGB3-203ENST00000430118 LYNP07948 512 aa3.58□□□□□ -1.84
HMGB3-203ENST00000430118 NGFRP08138 427 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms