RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 MC3RP41968 323 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 RFX3P48380 749 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 GZMKP49863 264 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 GNG2P59768 71 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 RPS21P63220 83 aaKnown RBP8.09□□□□□ -1.12
GABPB1-205ENST00000429662 POU4F2Q12837 409 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 FAPQ12884 760 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 SRSF5Q13243 272 aaKnown RBP8.09□□□□□ -1.12
GABPB1-205ENST00000429662 SGCGQ13326 291 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 MAB21L1Q13394 359 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 LRRC32Q14392 662 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 TATDN3Q17R31 274 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 ZSWIM7Q19AV6 140 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 GAB4Q2WGN9 574 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 ZNF425Q6IV72 752 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 MFSD12Q6NUT3 480 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 BAIAP2L2Q6UXY1 529 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 CREB3L2Q70SY1 520 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 LHFPL3Q86UP9 236 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 VRK2Q86Y07 508 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 LRRC25Q8N386 305 aaPredicted RBP8.09□□□□□ -1.12
GABPB1-205ENST00000429662 Q8N9G6 341 aaPredicted RBP8.09□□□□□ -1.12
GABPB1-205ENST00000429662 OR52E1Q8NGJ3 308 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 OR5M3Q8NGP4 307 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 UBASH3BQ8TF42 649 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 SMARCD2Q92925 531 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 SLC35A4Q96G79 324 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 C16orf58Q96GQ5 468 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 AHCYL2Q96HN2 611 aaKnown RBP8.09□□□□□ -1.12
GABPB1-205ENST00000429662 DMRTB1Q96MA1 342 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 HS6ST2Q96MM7 605 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 CMTM3Q96MX0 182 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 LRFN5Q96NI6 719 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 LRRC3BQ96PB8 259 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 SECISBP2Q96T21 854 aaKnown RBP8.09□□□□□ -1.12
GABPB1-205ENST00000429662 CD180Q99467 661 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 C7orf50Q9BRJ6 194 aaKnown RBP8.09□□□□□ -1.12
GABPB1-205ENST00000429662 ZNF649Q9BS31 505 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 TTYH2Q9BSA4 534 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 YIPF4Q9BSR8 244 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 LGR4Q9BXB1 951 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 NDEL1Q9GZM8 345 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 AICDAQ9GZX7 198 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 RSPH9Q9H1X1 276 aaPredicted RBP8.09□□□□□ -1.12
GABPB1-205ENST00000429662 TRPV4Q9HBA0 871 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 RANGRFQ9HD47 186 aaPredicted RBP8.09□□□□□ -1.12
GABPB1-205ENST00000429662 SLC6A20Q9NP91 592 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 CYSLTR2Q9NS75 346 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 ZNF275Q9NSD4 429 aaPredicted RBP8.09□□□□□ -1.12
GABPB1-205ENST00000429662 ACOXLQ9NUZ1 547 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 IMP3Q9NV31 184 aaKnown RBP8.09□□□□□ -1.12
GABPB1-205ENST00000429662 PAQR5Q9NXK6 330 aaPredicted RBP8.09□□□□□ -1.12
GABPB1-205ENST00000429662 OR6C2Q9NZP2 312 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 SATB2Q9UPW6 733 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 GPR52Q9Y2T5 361 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 WDR45Q9Y484 360 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 NOX1Q9Y5S8 564 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 MAU2Q9Y6X3 613 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 PTPN13Q12923 2485 aa8.08□□□□□ -1.12
GABPB1-205ENST00000429662 ASCC3Q8N3C0 2202 aaKnown RBP8.08□□□□□ -1.12
GABPB1-205ENST00000429662 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.08□□□□□ -1.12
GABPB1-205ENST00000429662 A0A0G2JN53 185 aa8.08□□□□□ -1.12
GABPB1-205ENST00000429662 LINC00854A0A1B0GVQ3 168 aa8.08□□□□□ -1.12
GABPB1-205ENST00000429662 TMEM8BA6NDV4 472 aa8.08□□□□□ -1.12
GABPB1-205ENST00000429662 OR6C70A6NIJ9 312 aa8.08□□□□□ -1.12
GABPB1-205ENST00000429662 INMT-MINDY4F8WBC2 141 aa8.08□□□□□ -1.12
GABPB1-205ENST00000429662 RNGTTO60942 597 aaKnown RBP8.08□□□□□ -1.12
GABPB1-205ENST00000429662 ITGA10O75578 1167 aa8.08□□□□□ -1.12
GABPB1-205ENST00000429662 SNAPC5O75971 98 aa8.08□□□□□ -1.12
GABPB1-205ENST00000429662 DHFRP00374 187 aa8.08□□□□□ -1.12
GABPB1-205ENST00000429662 GUSBP08236 651 aa8.08□□□□□ -1.12
GABPB1-205ENST00000429662 FAM157BP0CG42 384 aa8.08□□□□□ -1.12
GABPB1-205ENST00000429662 PSKH1P11801 424 aa8.08□□□□□ -1.12
GABPB1-205ENST00000429662 LORP23490 312 aaPredicted RBP8.08□□□□□ -1.12
GABPB1-205ENST00000429662 ACSL1P33121 698 aa8.08□□□□□ -1.12
GABPB1-205ENST00000429662 DRD3P35462 400 aa8.08□□□□□ -1.12
GABPB1-205ENST00000429662 TGM4P49221 684 aa8.08□□□□□ -1.12
GABPB1-205ENST00000429662 RRAS2P62070 204 aaPredicted RBP8.08□□□□□ -1.12
GABPB1-205ENST00000429662 ACTC1P68032 377 aa8.08□□□□□ -1.12
GABPB1-205ENST00000429662 ACTA1P68133 377 aa8.08□□□□□ -1.12
GABPB1-205ENST00000429662 PITPNAQ00169 270 aa8.08□□□□□ -1.12
GABPB1-205ENST00000429662 TNFRSF17Q02223 184 aa8.08□□□□□ -1.12
GABPB1-205ENST00000429662 C19orf57Q0VDD7 668 aa8.08□□□□□ -1.12
GABPB1-205ENST00000429662 EFR3AQ14156 821 aa8.08□□□□□ -1.12
GABPB1-205ENST00000429662 GALEQ14376 348 aa8.08□□□□□ -1.12
GABPB1-205ENST00000429662 SUZ12Q15022 739 aaKnown RBP8.08□□□□□ -1.12
GABPB1-205ENST00000429662 IRF4Q15306 451 aa8.08□□□□□ -1.12
GABPB1-205ENST00000429662 CST6Q15828 149 aa8.08□□□□□ -1.12
GABPB1-205ENST00000429662 RPE65Q16518 533 aa8.08□□□□□ -1.12
GABPB1-205ENST00000429662 CLEC12AQ5QGZ9 265 aa8.08□□□□□ -1.12
GABPB1-205ENST00000429662 AGBL4Q5VU57 503 aa8.08□□□□□ -1.12
GABPB1-205ENST00000429662 PYHIN1Q6K0P9 492 aa8.08□□□□□ -1.12
GABPB1-205ENST00000429662 SLC30A6Q6NXT4 461 aa8.08□□□□□ -1.12
GABPB1-205ENST00000429662 SMARCD3Q6STE5 483 aa8.08□□□□□ -1.12
GABPB1-205ENST00000429662 FRRS1Q6ZNA5 592 aa8.08□□□□□ -1.12
GABPB1-205ENST00000429662 USP53Q70EK8 1073 aa8.08□□□□□ -1.12
GABPB1-205ENST00000429662 TRILQ7L0X0 811 aa8.08□□□□□ -1.12
GABPB1-205ENST00000429662 ASPGQ86U10 573 aa8.08□□□□□ -1.12
GABPB1-205ENST00000429662 NRMQ8IXM6 262 aa8.08□□□□□ -1.12
GABPB1-205ENST00000429662 OR2L13Q8N349 312 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms