RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 RNF31Q96EP0 1072 aa12.83□□□□□ -0.36
SGMS1-203ENST00000429490 HS6ST2Q96MM7 605 aa12.83□□□□□ -0.36
SGMS1-203ENST00000429490 ACSS1Q9NUB1 689 aaPredicted RBP12.83□□□□□ -0.36
SGMS1-203ENST00000429490 AKAP7Q9P0M2 348 aaPredicted RBP12.83□□□□□ -0.36
SGMS1-203ENST00000429490 TMEM229AB2RXF0 380 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 CASC3O15234 703 aaKnown RBP12.82□□□□□ -0.36
SGMS1-203ENST00000429490 VEGFDO43915 354 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 SOX9P48436 509 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 BIKQ13323 160 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 EIPR1Q53HC9 387 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 ARMC6Q6NXE6 501 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 ZNF782Q6ZMW2 699 aaPredicted RBP12.82□□□□□ -0.36
SGMS1-203ENST00000429490 GPR155Q7Z3F1 870 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 ZNF676Q8N7Q3 588 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 LSM14AQ8ND56 463 aaKnown RBP12.82□□□□□ -0.36
SGMS1-203ENST00000429490 MSLNLQ96KJ4 702 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 DDOQ99489 341 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 A0A0B4J293 547 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 EDDM13A0A1B0GTR0 161 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 CDHR4A6H8M9 788 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 A8MVJ9 347 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 OR6A2O95222 327 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 PTHLHP12272 177 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 POLR2CP19387 275 aaPredicted RBP12.82□□□□□ -0.36
SGMS1-203ENST00000429490 ITGB7P26010 798 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 HSD17B2P37059 387 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 MNDAP41218 407 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 CSNK1G2P78368 415 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 PRDX1Q06830 199 aaKnown RBP12.82□□□□□ -0.36
SGMS1-203ENST00000429490 FAM111BQ6SJ93 734 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 MEPCEQ7L2J0 689 aaKnown RBP12.82□□□□□ -0.36
SGMS1-203ENST00000429490 TSEN15Q8WW01 171 aaKnown RBP12.82□□□□□ -0.36
SGMS1-203ENST00000429490 BPIFA2Q96DR5 249 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 CNRIP1Q96F85 164 aaPredicted RBP12.82□□□□□ -0.36
SGMS1-203ENST00000429490 INSM2Q96T92 566 aaPredicted RBP12.82□□□□□ -0.36
SGMS1-203ENST00000429490 SEC22CQ9BRL7 303 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 ACTRT3Q9BYD9 372 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 SRA1Q9HD15 236 aaKnown RBP12.82□□□□□ -0.36
SGMS1-203ENST00000429490 SIDT1Q9NXL6 827 aaKnown RBP12.82□□□□□ -0.36
SGMS1-203ENST00000429490 B3GALT2O43825 422 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 MAS1P04201 325 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 ZNF250P15622 560 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 ZNF10P21506 573 aaPredicted RBP12.82□□□□□ -0.36
SGMS1-203ENST00000429490 TRHRP34981 398 aaPredicted RBP12.82□□□□□ -0.36
SGMS1-203ENST00000429490 AP3S2P59780 193 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 GMFBP60983 142 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 EEF1A2Q05639 463 aaKnown RBP12.82□□□□□ -0.36
SGMS1-203ENST00000429490 EXOSC7Q15024 291 aaKnown RBP12.82□□□□□ -0.36
SGMS1-203ENST00000429490 ZNF628Q5EBL2 1059 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 ZNF770Q6IQ21 691 aaPredicted RBP12.82□□□□□ -0.36
SGMS1-203ENST00000429490 ENPP7Q6UWV6 458 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 TMPRSS12Q86WS5 348 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 NRROSQ86YC3 692 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 GPALPP1Q8IXQ4 340 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 NRSN1Q8IZ57 195 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 TCTE3Q8IZS6 198 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 LRRC25Q8N386 305 aaPredicted RBP12.82□□□□□ -0.36
SGMS1-203ENST00000429490 OR5M3Q8NGP4 307 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 NXPE3Q969Y0 559 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 KIAA1143Q96AT1 154 aaPredicted RBP12.82□□□□□ -0.36
SGMS1-203ENST00000429490 PTCHD1Q96NR3 888 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 OR14A2Q96R54 314 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 NT5DC2Q9H857 520 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 LSM2Q9Y333 95 aaKnown RBP12.82□□□□□ -0.36
SGMS1-203ENST00000429490 WDR90Q96KV7 1748 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 BPTFQ12830 3046 aa12.82□□□□□ -0.36
SGMS1-203ENST00000429490 TRAPPC13A5PLN9 417 aa12.81□□□□□ -0.36
SGMS1-203ENST00000429490 SEMA7AO75326 666 aa12.81□□□□□ -0.36
SGMS1-203ENST00000429490 SERPINA3P01011 423 aa12.81□□□□□ -0.36
SGMS1-203ENST00000429490 EPCAMP16422 314 aa12.81□□□□□ -0.36
SGMS1-203ENST00000429490 CXCL3P19876 107 aa12.81□□□□□ -0.36
SGMS1-203ENST00000429490 GDI2P50395 445 aaKnown RBP12.81□□□□□ -0.36
SGMS1-203ENST00000429490 AGERQ15109 404 aa12.81□□□□□ -0.36
SGMS1-203ENST00000429490 CNKSR3Q6P9H4 555 aa12.81□□□□□ -0.36
SGMS1-203ENST00000429490 METAP1DQ6UB28 335 aaPredicted RBP12.81□□□□□ -0.36
SGMS1-203ENST00000429490 FN3KQ9H479 309 aa12.81□□□□□ -0.36
SGMS1-203ENST00000429490 STK25O00506 426 aa12.81□□□□□ -0.36
SGMS1-203ENST00000429490 CFL1P23528 166 aaKnown RBP12.81□□□□□ -0.36
SGMS1-203ENST00000429490 ITPKBP27987 946 aa12.81□□□□□ -0.36
SGMS1-203ENST00000429490 GDNFP39905 211 aa12.81□□□□□ -0.36
SGMS1-203ENST00000429490 GARNL3Q5VVW2 1013 aa12.81□□□□□ -0.36
SGMS1-203ENST00000429490 LGALS14Q8TCE9 139 aa12.81□□□□□ -0.36
SGMS1-203ENST00000429490 S100A16Q96FQ6 103 aaKnown RBP12.81□□□□□ -0.36
SGMS1-203ENST00000429490 LRIG1Q96JA1 1093 aa12.81□□□□□ -0.36
SGMS1-203ENST00000429490 ABHD1Q96SE0 405 aa12.81□□□□□ -0.36
SGMS1-203ENST00000429490 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.81□□□□□ -0.369e-7■■■■□ 20.7
SGMS1-203ENST00000429490 MTHFD2LQ9H903 347 aaPredicted RBP12.81□□□□□ -0.36
SGMS1-203ENST00000429490 PRDM9Q9NQV7 894 aa12.81□□□□□ -0.36
SGMS1-203ENST00000429490 MYEF2Q9P2K5 600 aaKnown RBP12.81□□□□□ -0.36
SGMS1-203ENST00000429490 FBXL4Q9UKA2 621 aa12.81□□□□□ -0.36
SGMS1-203ENST00000429490 SCN10AQ9Y5Y9 1956 aa12.81□□□□□ -0.36
SGMS1-203ENST00000429490 SIX6O95475 246 aa12.81□□□□□ -0.36
SGMS1-203ENST00000429490 NFATC1O95644 943 aa12.81□□□□□ -0.36
SGMS1-203ENST00000429490 ZNF888P0CJ79 500 aaPredicted RBP12.81□□□□□ -0.36
SGMS1-203ENST00000429490 HTR1FP30939 366 aa12.81□□□□□ -0.36
SGMS1-203ENST00000429490 PSMD4P55036 377 aaKnown RBP12.81□□□□□ -0.36
SGMS1-203ENST00000429490 CDK3Q00526 305 aa12.81□□□□□ -0.36
SGMS1-203ENST00000429490 GALEQ14376 348 aa12.81□□□□□ -0.36
SGMS1-203ENST00000429490 CLPPQ16740 277 aaPredicted RBP12.81□□□□□ -0.36
SGMS1-203ENST00000429490 FCRLAQ7L513 359 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms