RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 PLAG1Q6DJT9 500 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 RGS7BPQ6MZT1 257 aaPredicted RBP10.62□□□□□ -0.71
CECR3-201ENST00000428828 TMEM71Q6P5X7 295 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 ZNF574Q6ZN55 896 aaPredicted RBP10.62□□□□□ -0.71
CECR3-201ENST00000428828 KRT78Q8N1N4 520 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 L3MBTL4Q8NA19 623 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 OR2T11Q8NH01 316 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 CCDC74BQ96LY2 380 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 CPPED1Q9BRF8 314 aaPredicted RBP10.62□□□□□ -0.71
CECR3-201ENST00000428828 EFCAB11Q9BUY7 163 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 DPCDQ9BVM2 203 aaPredicted RBP10.62□□□□□ -0.71
CECR3-201ENST00000428828 RAB33BQ9H082 229 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 GHITMQ9H3K2 345 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 SAV1Q9H4B6 383 aaPredicted RBP10.62□□□□□ -0.71
CECR3-201ENST00000428828 C1GALT1Q9NS00 363 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 SNTG1Q9NSN8 517 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 TMEM184CQ9NVA4 438 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 THUMPD1Q9NXG2 353 aaKnown RBP10.62□□□□□ -0.71
CECR3-201ENST00000428828 PLEKHB1Q9UF11 243 aaPredicted RBP10.62□□□□□ -0.71
CECR3-201ENST00000428828 SSR3Q9UNL2 185 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 ABCG2Q9UNQ0 655 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 LSM2Q9Y333 95 aaKnown RBP10.62□□□□□ -0.71
CECR3-201ENST00000428828 CEP250Q9BV73 2442 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 PTPRZ1P23471 2315 aaPredicted RBP10.62□□□□□ -0.71
CECR3-201ENST00000428828 SCN2AQ99250 2005 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 KCNE1BA0A087WTH5 132 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 IGHV5-10-1A0A0J9YXX1 117 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 DNASE2O00115 360 aaPredicted RBP10.62□□□□□ -0.71
CECR3-201ENST00000428828 LCMT2O60294 686 aaKnown RBP10.62□□□□□ -0.71
CECR3-201ENST00000428828 PLOD3O60568 738 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 UGDHO60701 494 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 CTSVO60911 334 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 IFNA4P05014 189 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 HSMCR30P0CW71 290 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 SLC6A1P30531 599 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 CD96P40200 585 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 BCL6P41182 706 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 RAG2P55895 527 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 REEP5Q00765 189 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 FCN2Q15485 313 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 ETFDHQ16134 617 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 MAPKAPK3Q16644 382 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 MEDAGQ5VYS4 303 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 HIST2H2AA3Q6FI13 130 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 ZNF425Q6IV72 752 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 MED27Q6P2C8 311 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 TMIGD1Q6UXZ0 262 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 Q6ZSR9 355 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 PAQR7Q86WK9 346 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 CCDC36Q8IYA8 594 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 Q8N402 240 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 ZNF655Q8N720 491 aaPredicted RBP10.62□□□□□ -0.71
CECR3-201ENST00000428828 CAMKVQ8NCB2 501 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 OR9Q1Q8NGQ5 310 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 OR5M11Q96RB7 305 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 MTERF1Q99551 399 aaKnown RBP10.62□□□□□ -0.71
CECR3-201ENST00000428828 SYNPO2LQ9H987 977 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 FAM60AQ9NP50 221 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 ASIC5Q9NY37 505 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 ZNF226Q9NYT6 803 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 SLC25A37Q9NYZ2 338 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 PURGQ9UJV8 347 aaKnown RBP10.62□□□□□ -0.71
CECR3-201ENST00000428828 TINAGQ9UJW2 476 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 TMEM5Q9Y2B1 443 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 PTPRBP23467 1997 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 NTN3O00634 580 aaPredicted RBP10.61□□□□□ -0.71
CECR3-201ENST00000428828 GNB5O14775 395 aa10.61□□□□□ -0.71
CECR3-201ENST00000428828 SELENOFO60613 162 aa10.61□□□□□ -0.71
CECR3-201ENST00000428828 PDYNP01213 254 aa10.61□□□□□ -0.71
CECR3-201ENST00000428828 CRISP3P54108 245 aa10.61□□□□□ -0.71
CECR3-201ENST00000428828 ALDH6A1Q02252 535 aaKnown RBP10.61□□□□□ -0.71
CECR3-201ENST00000428828 MAP4K2Q12851 820 aa10.61□□□□□ -0.71
CECR3-201ENST00000428828 MAD2L1Q13257 205 aaPredicted RBP10.61□□□□□ -0.71
CECR3-201ENST00000428828 MED22Q15528 200 aa10.61□□□□□ -0.71
CECR3-201ENST00000428828 GGTA1PQ4G0N0 100 aa10.61□□□□□ -0.71
CECR3-201ENST00000428828 HACD4Q5VWC8 232 aa10.61□□□□□ -0.71
CECR3-201ENST00000428828 DHRS13Q6UX07 377 aa10.61□□□□□ -0.71
CECR3-201ENST00000428828 SLC34A3Q8N130 599 aa10.61□□□□□ -0.71
CECR3-201ENST00000428828 OR11H4Q8NGC9 324 aa10.61□□□□□ -0.71
CECR3-201ENST00000428828 OR4K1Q8NGD4 311 aa10.61□□□□□ -0.71
CECR3-201ENST00000428828 OR4D9Q8NGE8 314 aa10.61□□□□□ -0.71
CECR3-201ENST00000428828 OR4A15Q8NGL6 344 aa10.61□□□□□ -0.71
CECR3-201ENST00000428828 OR8D4Q8NGM9 314 aa10.61□□□□□ -0.71
CECR3-201ENST00000428828 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.61□□□□□ -0.71
CECR3-201ENST00000428828 TMEM163Q8TC26 289 aa10.61□□□□□ -0.71
CECR3-201ENST00000428828 SELENOMQ8WWX9 145 aa10.61□□□□□ -0.71
CECR3-201ENST00000428828 SGK3Q96BR1 496 aa10.61□□□□□ -0.71
CECR3-201ENST00000428828 FAM120BQ96EK7 910 aaKnown RBP10.61□□□□□ -0.71
CECR3-201ENST00000428828 WDR34Q96EX3 536 aa10.61□□□□□ -0.71
CECR3-201ENST00000428828 ARL5BQ96KC2 179 aa10.61□□□□□ -0.71
CECR3-201ENST00000428828 ERMAPQ96PL5 475 aaPredicted RBP10.61□□□□□ -0.71
CECR3-201ENST00000428828 CD180Q99467 661 aa10.61□□□□□ -0.71
CECR3-201ENST00000428828 MACROD1Q9BQ69 325 aa10.61□□□□□ -0.71
CECR3-201ENST00000428828 SEC22CQ9BRL7 303 aa10.61□□□□□ -0.71
CECR3-201ENST00000428828 IKZF5Q9H5V7 419 aa10.61□□□□□ -0.71
CECR3-201ENST00000428828 SLCO1C1Q9NYB5 712 aa10.61□□□□□ -0.71
CECR3-201ENST00000428828 SCP2D1Q9UJQ7 156 aa10.61□□□□□ -0.71
CECR3-201ENST00000428828 CDV3Q9UKY7 258 aaKnown RBP10.61□□□□□ -0.71
CECR3-201ENST00000428828 NPTNQ9Y639 398 aa10.61□□□□□ -0.71
CECR3-201ENST00000428828 CLCA3PQ9Y6N3 262 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms