RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 LRRC75A-AS1Q8N1F1 130 aa15.25■□□□□ 0.03
TRIM39-209ENST00000428728 FBXO27Q8NI29 283 aa15.25■□□□□ 0.03
TRIM39-209ENST00000428728 PSMA8Q8TAA3 256 aa15.25■□□□□ 0.03
TRIM39-209ENST00000428728 RNF128Q8TEB7 428 aa15.25■□□□□ 0.03
TRIM39-209ENST00000428728 REXO5Q96IC2 774 aaKnown RBP15.25■□□□□ 0.03
TRIM39-209ENST00000428728 PKNOX2Q96KN3 472 aa15.25■□□□□ 0.03
TRIM39-209ENST00000428728 PPP1R36Q96LQ0 422 aa15.25■□□□□ 0.03
TRIM39-209ENST00000428728 Q96MF0 132 aa15.25■□□□□ 0.03
TRIM39-209ENST00000428728 OR7D2Q96RA2 312 aa15.25■□□□□ 0.03
TRIM39-209ENST00000428728 PRPF18Q99633 342 aaKnown RBP15.25■□□□□ 0.03
TRIM39-209ENST00000428728 DUSP26Q9BV47 211 aa15.25■□□□□ 0.03
TRIM39-209ENST00000428728 ACTR6Q9GZN1 396 aa15.25■□□□□ 0.03
TRIM39-209ENST00000428728 GLRX2Q9NS18 164 aa15.25■□□□□ 0.03
TRIM39-209ENST00000428728 BPGMP07738 259 aa15.24■□□□□ 0.03
TRIM39-209ENST00000428728 G6PDP11413 515 aa15.24■□□□□ 0.03
TRIM39-209ENST00000428728 PPP3CBP16298 524 aa15.24■□□□□ 0.03
TRIM39-209ENST00000428728 PRPS1L1P21108 318 aa15.24■□□□□ 0.03
TRIM39-209ENST00000428728 ATP12AP54707 1039 aa15.24■□□□□ 0.03
TRIM39-209ENST00000428728 SUMO3P55854 103 aaPredicted RBP15.24■□□□□ 0.03
TRIM39-209ENST00000428728 HBA1P69905 142 aa15.24■□□□□ 0.03
TRIM39-209ENST00000428728 PDCD2Q16342 344 aaPredicted RBP15.24■□□□□ 0.03
TRIM39-209ENST00000428728 PGS1Q32NB8 556 aa15.24■□□□□ 0.03
TRIM39-209ENST00000428728 ZNF704Q6ZNC4 412 aaPredicted RBP15.24■□□□□ 0.03
TRIM39-209ENST00000428728 YTHDF3Q7Z739 585 aaKnown RBP15.24■□□□□ 0.03
TRIM39-209ENST00000428728 CLEC4FQ8N1N0 589 aa15.24■□□□□ 0.03
TRIM39-209ENST00000428728 PPP1R14CQ8TAE6 165 aa15.24■□□□□ 0.03
TRIM39-209ENST00000428728 CPNE4Q96A23 557 aaPredicted RBP15.24■□□□□ 0.03
TRIM39-209ENST00000428728 MOAP1Q96BY2 351 aa15.24■□□□□ 0.03
TRIM39-209ENST00000428728 COQ8BQ96D53 544 aa15.24■□□□□ 0.03
TRIM39-209ENST00000428728 BHLHE41Q9C0J9 482 aaPredicted RBP15.24■□□□□ 0.03
TRIM39-209ENST00000428728 HOXD1Q9GZZ0 328 aa15.24■□□□□ 0.03
TRIM39-209ENST00000428728 FANCFQ9NPI8 374 aa15.24■□□□□ 0.03
TRIM39-209ENST00000428728 ICAM5Q9UMF0 924 aa15.24■□□□□ 0.03
TRIM39-209ENST00000428728 GPC6Q9Y625 555 aaPredicted RBP15.24■□□□□ 0.03
TRIM39-209ENST00000428728 H7C1Q1 480 aa15.23■□□□□ 0.03
TRIM39-209ENST00000428728 ZNF195O14628 629 aa15.23■□□□□ 0.03
TRIM39-209ENST00000428728 KLF4O43474 513 aa15.23■□□□□ 0.03
TRIM39-209ENST00000428728 EFNA2O43921 213 aa15.23■□□□□ 0.03
TRIM39-209ENST00000428728 PLAUP00749 431 aa15.23■□□□□ 0.03
TRIM39-209ENST00000428728 PRKCAP17252 672 aa15.23■□□□□ 0.03
TRIM39-209ENST00000428728 ZNF844Q08AG5 666 aa15.23■□□□□ 0.03
TRIM39-209ENST00000428728 TMEM176BQ3YBM2 270 aaPredicted RBP15.23■□□□□ 0.03
TRIM39-209ENST00000428728 TMEM201Q5SNT2 666 aa15.23■□□□□ 0.03
TRIM39-209ENST00000428728 PDZK1Q5T2W1 519 aa15.23■□□□□ 0.03
TRIM39-209ENST00000428728 GTF2IRD2BQ6EKJ0 949 aa15.23■□□□□ 0.03
TRIM39-209ENST00000428728 GTF2IRD2Q86UP8 949 aa15.23■□□□□ 0.03
TRIM39-209ENST00000428728 RIMKLAQ8IXN7 391 aa15.23■□□□□ 0.03
TRIM39-209ENST00000428728 CLECL1Q8IZS7 167 aa15.23■□□□□ 0.03
TRIM39-209ENST00000428728 CIARTQ8N365 385 aaPredicted RBP15.23■□□□□ 0.03
TRIM39-209ENST00000428728 NATD1Q8N6N6 113 aa15.23■□□□□ 0.03
TRIM39-209ENST00000428728 ZFP90Q8TF47 636 aa15.23■□□□□ 0.03
TRIM39-209ENST00000428728 AENQ8WTP8 325 aaKnown RBP15.23■□□□□ 0.03
TRIM39-209ENST00000428728 ARSGQ96EG1 525 aa15.23■□□□□ 0.03
TRIM39-209ENST00000428728 PLPPR2Q96GM1 343 aa15.23■□□□□ 0.03
TRIM39-209ENST00000428728 SLC35G5Q96KT7 338 aa15.23■□□□□ 0.03
TRIM39-209ENST00000428728 ROPN1BQ9BZX4 212 aaPredicted RBP15.23■□□□□ 0.03
TRIM39-209ENST00000428728 SERHL2Q9H4I8 314 aa15.23■□□□□ 0.03
TRIM39-209ENST00000428728 COQ10BQ9H8M1 238 aa15.23■□□□□ 0.03
TRIM39-209ENST00000428728 ROPN1Q9HAT0 212 aaPredicted RBP15.23■□□□□ 0.03
TRIM39-209ENST00000428728 TIGARQ9NQ88 270 aa15.23■□□□□ 0.03
TRIM39-209ENST00000428728 NOP53Q9NZM5 478 aaKnown RBP15.23■□□□□ 0.03
TRIM39-209ENST00000428728 IGHV3-15A0A0B4J1V0 119 aa15.22■□□□□ 0.03
TRIM39-209ENST00000428728 RNF103-CHMP3A0A140T963 221 aa15.22■□□□□ 0.03
TRIM39-209ENST00000428728 WDR91A4D1P6 747 aa15.22■□□□□ 0.03
TRIM39-209ENST00000428728 GJE1A6NN92 205 aa15.22■□□□□ 0.03
TRIM39-209ENST00000428728 NPIPB9F8W1W9 429 aa15.22■□□□□ 0.03
TRIM39-209ENST00000428728 SMAD7O15105 426 aaKnown RBP15.22■□□□□ 0.03
TRIM39-209ENST00000428728 ITM2AO43736 263 aa15.22■□□□□ 0.03
TRIM39-209ENST00000428728 TYROBPO43914 113 aa15.22■□□□□ 0.03
TRIM39-209ENST00000428728 NTN1O95631 604 aa15.22■□□□□ 0.03
TRIM39-209ENST00000428728 PABPC4LP0CB38 370 aaKnown RBP15.22■□□□□ 0.03
TRIM39-209ENST00000428728 UBL4AP11441 157 aa15.22■□□□□ 0.03
TRIM39-209ENST00000428728 SELENBP1Q13228 472 aa15.22■□□□□ 0.03
TRIM39-209ENST00000428728 MAD2L1Q13257 205 aaPredicted RBP15.22■□□□□ 0.03
TRIM39-209ENST00000428728 RNPS1Q15287 305 aaKnown RBP15.22■□□□□ 0.03
TRIM39-209ENST00000428728 TSC22D1Q15714 1073 aa15.22■□□□□ 0.03
TRIM39-209ENST00000428728 GPR68Q15743 365 aa15.22■□□□□ 0.03
TRIM39-209ENST00000428728 OR4F3Q6IEY1 312 aa15.22■□□□□ 0.03
TRIM39-209ENST00000428728 TFAP2EQ6VUC0 442 aa15.22■□□□□ 0.03
TRIM39-209ENST00000428728 PLEKHM3Q6ZWE6 761 aa15.22■□□□□ 0.03
TRIM39-209ENST00000428728 FCRLAQ7L513 359 aa15.22■□□□□ 0.03
TRIM39-209ENST00000428728 OLIG3Q7RTU3 272 aa15.22■□□□□ 0.03
TRIM39-209ENST00000428728 NUFIP2Q7Z417 695 aaKnown RBP15.22■□□□□ 0.03
TRIM39-209ENST00000428728 NUDCD3Q8IVD9 361 aa15.22■□□□□ 0.03
TRIM39-209ENST00000428728 TUSC5Q8IXB3 177 aa15.22■□□□□ 0.03
TRIM39-209ENST00000428728 GPR119Q8TDV5 335 aa15.22■□□□□ 0.03
TRIM39-209ENST00000428728 COX4I2Q96KJ9 171 aa15.22■□□□□ 0.03
TRIM39-209ENST00000428728 KLHL13Q9P2N7 655 aa15.22■□□□□ 0.03
TRIM39-209ENST00000428728 DTNAQ9Y4J8 743 aa15.22■□□□□ 0.03
TRIM39-209ENST00000428728 ACTL7BQ9Y614 415 aa15.22■□□□□ 0.03
TRIM39-209ENST00000428728 USF3Q68DE3 2245 aa15.21■□□□□ 0.03
TRIM39-209ENST00000428728 A0A1W2PNR3 127 aa15.21■□□□□ 0.03
TRIM39-209ENST00000428728 TRIM64A6NGJ6 449 aa15.21■□□□□ 0.03
TRIM39-209ENST00000428728 TRIM64BA6NI03 449 aa15.21■□□□□ 0.03
TRIM39-209ENST00000428728 ZNF264O43296 627 aa15.21■□□□□ 0.03
TRIM39-209ENST00000428728 CYP7B1O75881 506 aa15.21■□□□□ 0.03
TRIM39-209ENST00000428728 NID1P14543 1247 aa15.21■□□□□ 0.03
TRIM39-209ENST00000428728 PSMB1P20618 241 aaKnown RBP15.21■□□□□ 0.03
TRIM39-209ENST00000428728 MATN1P21941 496 aa15.21■□□□□ 0.03
TRIM39-209ENST00000428728 ADH6P28332 368 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms