RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 GANABQ14697 944 aaKnown RBP13.2□□□□□ -0.3
SGCE-204ENST00000428696 TOMM34Q15785 309 aaPredicted RBP13.2□□□□□ -0.3
SGCE-204ENST00000428696 ENPP6Q6UWR7 440 aa13.2□□□□□ -0.3
SGCE-204ENST00000428696 ARPINQ7Z6K5 226 aa13.2□□□□□ -0.3
SGCE-204ENST00000428696 ARMC8Q8IUR7 673 aa13.2□□□□□ -0.3
SGCE-204ENST00000428696 ZZZ3Q8IYH5 903 aa13.2□□□□□ -0.3
SGCE-204ENST00000428696 CLIP4Q8N3C7 705 aa13.2□□□□□ -0.3
SGCE-204ENST00000428696 METTL25Q8N6Q8 603 aa13.2□□□□□ -0.3
SGCE-204ENST00000428696 TIMP4Q99727 224 aa13.2□□□□□ -0.3
SGCE-204ENST00000428696 UGT2B28Q9BY64 529 aa13.2□□□□□ -0.3
SGCE-204ENST00000428696 OR2B2Q9GZK3 357 aa13.2□□□□□ -0.3
SGCE-204ENST00000428696 BCL2L10Q9HD36 194 aa13.2□□□□□ -0.3
SGCE-204ENST00000428696 CMTM6Q9NX76 183 aa13.2□□□□□ -0.3
SGCE-204ENST00000428696 ICAM5Q9UMF0 924 aa13.2□□□□□ -0.3
SGCE-204ENST00000428696 ZNF337Q9Y3M9 751 aa13.2□□□□□ -0.3
SGCE-204ENST00000428696 GMEB1Q9Y692 573 aa13.2□□□□□ -0.3
SGCE-204ENST00000428696 SHANK1Q9Y566 2161 aa13.19□□□□□ -0.3
SGCE-204ENST00000428696 A0A087WZY1 265 aa13.19□□□□□ -0.3
SGCE-204ENST00000428696 A0A1B0GVC2 190 aa13.19□□□□□ -0.3
SGCE-204ENST00000428696 OR14I1A6ND48 311 aa13.19□□□□□ -0.3
SGCE-204ENST00000428696 B2RBV5 119 aa13.19□□□□□ -0.3
SGCE-204ENST00000428696 M0QX08 132 aa13.19□□□□□ -0.3
SGCE-204ENST00000428696 ACTL6AO96019 429 aa13.19□□□□□ -0.3
SGCE-204ENST00000428696 OPN1SWP03999 348 aa13.19□□□□□ -0.3
SGCE-204ENST00000428696 PABPC4LP0CB38 370 aaKnown RBP13.19□□□□□ -0.3
SGCE-204ENST00000428696 GKN3PP0CG01 181 aa13.19□□□□□ -0.3
SGCE-204ENST00000428696 PEPDP12955 493 aa13.19□□□□□ -0.3
SGCE-204ENST00000428696 PGCP20142 388 aa13.19□□□□□ -0.3
SGCE-204ENST00000428696 POU3F2P20265 443 aaPredicted RBP13.19□□□□□ -0.3
SGCE-204ENST00000428696 ADH7P40394 386 aa13.19□□□□□ -0.3
SGCE-204ENST00000428696 IDH2P48735 452 aaKnown RBP13.19□□□□□ -0.3
SGCE-204ENST00000428696 MNAT1P51948 309 aa13.19□□□□□ -0.3
SGCE-204ENST00000428696 SLC25A3Q00325 362 aa13.19□□□□□ -0.3
SGCE-204ENST00000428696 SKP2Q13309 424 aa13.19□□□□□ -0.3
SGCE-204ENST00000428696 KRT72Q14CN4 511 aa13.19□□□□□ -0.3
SGCE-204ENST00000428696 QPRTQ15274 297 aa13.19□□□□□ -0.3
SGCE-204ENST00000428696 VMACQ2NL98 169 aa13.19□□□□□ -0.3
SGCE-204ENST00000428696 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.19□□□□□ -0.3
SGCE-204ENST00000428696 PRAMEF8Q5VWM4 474 aa13.19□□□□□ -0.3
SGCE-204ENST00000428696 PRAMEF7Q5VXH5 474 aa13.19□□□□□ -0.3
SGCE-204ENST00000428696 PPP4R4Q6NUP7 873 aa13.19□□□□□ -0.3
SGCE-204ENST00000428696 ZNF836Q6ZNA1 936 aa13.19□□□□□ -0.3
SGCE-204ENST00000428696 CHMP1BQ7LBR1 199 aa13.19□□□□□ -0.3
SGCE-204ENST00000428696 SLC15A3Q8IY34 581 aa13.19□□□□□ -0.3
SGCE-204ENST00000428696 SMYD1Q8NB12 490 aa13.19□□□□□ -0.3
SGCE-204ENST00000428696 OR2T12Q8NG77 320 aa13.19□□□□□ -0.3
SGCE-204ENST00000428696 GPR119Q8TDV5 335 aa13.19□□□□□ -0.3
SGCE-204ENST00000428696 RNF145Q96MT1 663 aa13.19□□□□□ -0.3
SGCE-204ENST00000428696 TMEM185BQ9H7F4 350 aa13.19□□□□□ -0.3
SGCE-204ENST00000428696 GMPR2Q9P2T1 348 aaKnown RBP13.19□□□□□ -0.3
SGCE-204ENST00000428696 MRPS18CQ9Y3D5 142 aaKnown RBP13.19□□□□□ -0.3
SGCE-204ENST00000428696 OR2M5A3KFT3 312 aa13.18□□□□□ -0.3
SGCE-204ENST00000428696 CFAP73A6NFT4 308 aa13.18□□□□□ -0.3
SGCE-204ENST00000428696 H0Y3Z8 333 aa13.18□□□□□ -0.3
SGCE-204ENST00000428696 AP3D1O14617 1153 aa13.18□□□□□ -0.3
SGCE-204ENST00000428696 SEC14L5O43304 696 aa13.18□□□□□ -0.3
SGCE-204ENST00000428696 FRS3O43559 492 aa13.18□□□□□ -0.3
SGCE-204ENST00000428696 AGFG2O95081 481 aa13.18□□□□□ -0.3
SGCE-204ENST00000428696 GP1BBP13224 206 aa13.18□□□□□ -0.3
SGCE-204ENST00000428696 ETS2P15036 469 aa13.18□□□□□ -0.3
SGCE-204ENST00000428696 CCNA2P20248 432 aa13.18□□□□□ -0.3
SGCE-204ENST00000428696 ME2P23368 584 aa13.18□□□□□ -0.3
SGCE-204ENST00000428696 PCGF2P35227 344 aa13.18□□□□□ -0.3
SGCE-204ENST00000428696 MERTKQ12866 999 aa13.18□□□□□ -0.3
SGCE-204ENST00000428696 PLPPR5Q32ZL2 321 aa13.18□□□□□ -0.3
SGCE-204ENST00000428696 DCST1Q5T197 706 aa13.18□□□□□ -0.3
SGCE-204ENST00000428696 INTS11Q5TA45 600 aaKnown RBP13.18□□□□□ -0.3
SGCE-204ENST00000428696 VASNQ6EMK4 673 aa13.18□□□□□ -0.3
SGCE-204ENST00000428696 TRPM8Q7Z2W7 1104 aa13.18□□□□□ -0.3
SGCE-204ENST00000428696 SLC30A8Q8IWU4 369 aa13.18□□□□□ -0.3
SGCE-204ENST00000428696 CHERPQ8IWX8 916 aaKnown RBP13.18□□□□□ -0.3
SGCE-204ENST00000428696 CMIPQ8IY22 773 aa13.18□□□□□ -0.3
SGCE-204ENST00000428696 CADM2Q8N3J6 435 aa13.18□□□□□ -0.3
SGCE-204ENST00000428696 RNF148Q8N7C7 305 aa13.18□□□□□ -0.3
SGCE-204ENST00000428696 FBXO27Q8NI29 283 aa13.18□□□□□ -0.3
SGCE-204ENST00000428696 REXO5Q96IC2 774 aaKnown RBP13.18□□□□□ -0.3
SGCE-204ENST00000428696 ZNF583Q96ND8 569 aa13.18□□□□□ -0.3
SGCE-204ENST00000428696 NPAS1Q99742 590 aa13.18□□□□□ -0.3
SGCE-204ENST00000428696 GPATCH1Q9BRR8 931 aaKnown RBP13.18□□□□□ -0.3
SGCE-204ENST00000428696 SPATA9Q9BWV2 254 aa13.18□□□□□ -0.3
SGCE-204ENST00000428696 STOML1Q9UBI4 398 aa13.18□□□□□ -0.3
SGCE-204ENST00000428696 PACSIN3Q9UKS6 424 aa13.18□□□□□ -0.3
SGCE-204ENST00000428696 ZNF835Q9Y2P0 537 aa13.18□□□□□ -0.3
SGCE-204ENST00000428696 AP3M1Q9Y2T2 418 aa13.18□□□□□ -0.3
SGCE-204ENST00000428696 DSPPQ9NZW4 1301 aa13.17□□□□□ -0.3
SGCE-204ENST00000428696 A0A1B0GUH1 482 aa13.17□□□□□ -0.3
SGCE-204ENST00000428696 ELOVL7A1L3X0 281 aa13.17□□□□□ -0.3
SGCE-204ENST00000428696 CDHR4A6H8M9 788 aa13.17□□□□□ -0.3
SGCE-204ENST00000428696 PRORSD1PA6NEY8 169 aa13.17□□□□□ -0.3
SGCE-204ENST00000428696 NME4O00746 187 aa13.17□□□□□ -0.3
SGCE-204ENST00000428696 THBS1P07996 1170 aa13.17□□□□□ -0.3
SGCE-204ENST00000428696 UQCRBP14927 111 aa13.17□□□□□ -0.3
SGCE-204ENST00000428696 TCN1P20061 433 aaPredicted RBP13.17□□□□□ -0.3
SGCE-204ENST00000428696 RPS4Y1P22090 263 aaKnown RBP13.17□□□□□ -0.3
SGCE-204ENST00000428696 CHMP24386 653 aa13.17□□□□□ -0.3
SGCE-204ENST00000428696 CA7P43166 264 aa13.17□□□□□ -0.3
SGCE-204ENST00000428696 SLC6A8P48029 635 aa13.17□□□□□ -0.3
SGCE-204ENST00000428696 GZMMP51124 257 aa13.17□□□□□ -0.3
SGCE-204ENST00000428696 SUMO3P55854 103 aaPredicted RBP13.17□□□□□ -0.3
SGCE-204ENST00000428696 GFRA1P56159 465 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms