RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 C22orf34Q6ZV56 151 aa10.75□□□□□ -0.69
TTC3-208ENST00000428693 MTERF4Q7Z6M4 381 aaKnown RBP10.75□□□□□ -0.69
TTC3-208ENST00000428693 YTHDF3Q7Z739 585 aaKnown RBP10.75□□□□□ -0.69
TTC3-208ENST00000428693 BIVMQ86UB2 503 aa10.75□□□□□ -0.69
TTC3-208ENST00000428693 CXorf67Q86X51 503 aaPredicted RBP10.75□□□□□ -0.69
TTC3-208ENST00000428693 CLEC4FQ8N1N0 589 aa10.75□□□□□ -0.69
TTC3-208ENST00000428693 ZNF619Q8N2I2 560 aa10.75□□□□□ -0.69
TTC3-208ENST00000428693 ABHD3Q8WU67 409 aa10.75□□□□□ -0.69
TTC3-208ENST00000428693 Q96MF0 132 aa10.75□□□□□ -0.69
TTC3-208ENST00000428693 OR7D2Q96RA2 312 aa10.75□□□□□ -0.69
TTC3-208ENST00000428693 ROPN1BQ9BZX4 212 aaPredicted RBP10.75□□□□□ -0.69
TTC3-208ENST00000428693 ACTR6Q9GZN1 396 aa10.75□□□□□ -0.69
TTC3-208ENST00000428693 L2HGDHQ9H9P8 463 aa10.75□□□□□ -0.69
TTC3-208ENST00000428693 ROPN1Q9HAT0 212 aaPredicted RBP10.75□□□□□ -0.69
TTC3-208ENST00000428693 DLL4Q9NR61 685 aa10.75□□□□□ -0.69
TTC3-208ENST00000428693 GLRX2Q9NS18 164 aa10.75□□□□□ -0.69
TTC3-208ENST00000428693 LGALS13Q9UHV8 139 aa10.75□□□□□ -0.69
TTC3-208ENST00000428693 PCDHGB4Q9UN71 923 aa10.75□□□□□ -0.69
TTC3-208ENST00000428693 IGHV3-15A0A0B4J1V0 119 aa10.74□□□□□ -0.69
TTC3-208ENST00000428693 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.74□□□□□ -0.69
TTC3-208ENST00000428693 C7orf72A4D263 438 aa10.74□□□□□ -0.69
TTC3-208ENST00000428693 GJE1A6NN92 205 aa10.74□□□□□ -0.69
TTC3-208ENST00000428693 H7C1Q1 480 aa10.74□□□□□ -0.69
TTC3-208ENST00000428693 CPSF4O95639 269 aaKnown RBP10.74□□□□□ -0.69
TTC3-208ENST00000428693 LINGO3P0C6S8 592 aa10.74□□□□□ -0.69
TTC3-208ENST00000428693 PPP3CBP16298 524 aa10.74□□□□□ -0.69
TTC3-208ENST00000428693 MATN1P21941 496 aa10.74□□□□□ -0.69
TTC3-208ENST00000428693 IL32P24001 234 aa10.74□□□□□ -0.69
TTC3-208ENST00000428693 AGTR1P30556 359 aa10.74□□□□□ -0.69
TTC3-208ENST00000428693 ARRB2P32121 409 aa10.74□□□□□ -0.69
TTC3-208ENST00000428693 ATP12AP54707 1039 aa10.74□□□□□ -0.69
TTC3-208ENST00000428693 MAD2L1Q13257 205 aaPredicted RBP10.74□□□□□ -0.69
TTC3-208ENST00000428693 GUSBP1Q15486 140 aa10.74□□□□□ -0.69
TTC3-208ENST00000428693 TSC22D1Q15714 1073 aa10.74□□□□□ -0.69
TTC3-208ENST00000428693 TOMM34Q15785 309 aaPredicted RBP10.74□□□□□ -0.69
TTC3-208ENST00000428693 KRT71Q3SY84 523 aa10.74□□□□□ -0.69
TTC3-208ENST00000428693 KLHL26Q53HC5 615 aa10.74□□□□□ -0.69
TTC3-208ENST00000428693 BEX5Q5H9J7 111 aa10.74□□□□□ -0.69
TTC3-208ENST00000428693 OR4F3Q6IEY1 312 aa10.74□□□□□ -0.69
TTC3-208ENST00000428693 BHLHB9Q6PI77 547 aa10.74□□□□□ -0.69
TTC3-208ENST00000428693 C20orf204Q6ZNR8 217 aa10.74□□□□□ -0.69
TTC3-208ENST00000428693 PLEKHM3Q6ZWE6 761 aa10.74□□□□□ -0.69
TTC3-208ENST00000428693 C16orf62Q7Z3J2 963 aa10.74□□□□□ -0.69
TTC3-208ENST00000428693 TUSC5Q8IXB3 177 aa10.74□□□□□ -0.69
TTC3-208ENST00000428693 NATD1Q8N6N6 113 aa10.74□□□□□ -0.69
TTC3-208ENST00000428693 TOR1AIP2Q8NFQ8 470 aa10.74□□□□□ -0.69
TTC3-208ENST00000428693 OR4A15Q8NGL6 344 aa10.74□□□□□ -0.69
TTC3-208ENST00000428693 CPNE4Q96A23 557 aaPredicted RBP10.74□□□□□ -0.69
TTC3-208ENST00000428693 MOAP1Q96BY2 351 aa10.74□□□□□ -0.69
TTC3-208ENST00000428693 ARSGQ96EG1 525 aa10.74□□□□□ -0.69
TTC3-208ENST00000428693 PLPPR2Q96GM1 343 aa10.74□□□□□ -0.69
TTC3-208ENST00000428693 ADGRG7Q96K78 797 aa10.74□□□□□ -0.69
TTC3-208ENST00000428693 TACO1Q9BSH4 297 aaKnown RBP10.74□□□□□ -0.69
TTC3-208ENST00000428693 SRXN1Q9BYN0 137 aa10.74□□□□□ -0.69
TTC3-208ENST00000428693 BHLHE41Q9C0J9 482 aaPredicted RBP10.74□□□□□ -0.69
TTC3-208ENST00000428693 RNF103-CHMP3A0A140T963 221 aa10.73□□□□□ -0.69
TTC3-208ENST00000428693 A0A1W2PNR3 127 aa10.73□□□□□ -0.69
TTC3-208ENST00000428693 C9JVG2 144 aa10.73□□□□□ -0.69
TTC3-208ENST00000428693 RGS16O15492 202 aaPredicted RBP10.73□□□□□ -0.69
TTC3-208ENST00000428693 CLOCKO15516 846 aa10.73□□□□□ -0.69
TTC3-208ENST00000428693 ZNF264O43296 627 aa10.73□□□□□ -0.69
TTC3-208ENST00000428693 ITM2AO43736 263 aa10.73□□□□□ -0.69
TTC3-208ENST00000428693 PRKD3O94806 890 aa10.73□□□□□ -0.69
TTC3-208ENST00000428693 THBDP07204 575 aa10.73□□□□□ -0.69
TTC3-208ENST00000428693 UBL4AP11441 157 aa10.73□□□□□ -0.69
TTC3-208ENST00000428693 HOXB4P17483 251 aaPredicted RBP10.73□□□□□ -0.69
TTC3-208ENST00000428693 PSMA4P25789 261 aaKnown RBP10.73□□□□□ -0.69
TTC3-208ENST00000428693 PCYT1AP49585 367 aa10.73□□□□□ -0.69
TTC3-208ENST00000428693 HBA1P69905 142 aa10.73□□□□□ -0.69
TTC3-208ENST00000428693 CBFBQ13951 182 aa10.73□□□□□ -0.69
TTC3-208ENST00000428693 QPRTQ15274 297 aa10.73□□□□□ -0.69
TTC3-208ENST00000428693 CHI3L2Q15782 390 aa10.73□□□□□ -0.69
TTC3-208ENST00000428693 ZNF239Q16600 458 aaKnown RBP10.73□□□□□ -0.69
TTC3-208ENST00000428693 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.73□□□□□ -0.69
TTC3-208ENST00000428693 PDZK1Q5T2W1 519 aa10.73□□□□□ -0.69
TTC3-208ENST00000428693 EMBQ6PCB8 327 aa10.73□□□□□ -0.69
TTC3-208ENST00000428693 ZNF704Q6ZNC4 412 aaPredicted RBP10.73□□□□□ -0.69
TTC3-208ENST00000428693 FCRLAQ7L513 359 aa10.73□□□□□ -0.69
TTC3-208ENST00000428693 OLIG3Q7RTU3 272 aa10.73□□□□□ -0.69
TTC3-208ENST00000428693 NUFIP2Q7Z417 695 aaKnown RBP10.73□□□□□ -0.69
TTC3-208ENST00000428693 C6orf120Q7Z4R8 191 aa10.73□□□□□ -0.69
TTC3-208ENST00000428693 CLECL1Q8IZS7 167 aa10.73□□□□□ -0.69
TTC3-208ENST00000428693 SFXN5Q8TD22 340 aa10.73□□□□□ -0.69
TTC3-208ENST00000428693 GPR119Q8TDV5 335 aa10.73□□□□□ -0.69
TTC3-208ENST00000428693 TMEM171Q8WVE6 324 aa10.73□□□□□ -0.69
TTC3-208ENST00000428693 CAVIN3Q969G5 261 aa10.73□□□□□ -0.69
TTC3-208ENST00000428693 ARL8AQ96BM9 186 aa10.73□□□□□ -0.69
TTC3-208ENST00000428693 S100PBPQ96BU1 408 aa10.73□□□□□ -0.69
TTC3-208ENST00000428693 ZNF775Q96BV0 537 aaPredicted RBP10.73□□□□□ -0.69
TTC3-208ENST00000428693 COQ8BQ96D53 544 aa10.73□□□□□ -0.69
TTC3-208ENST00000428693 SLC35G5Q96KT7 338 aa10.73□□□□□ -0.69
TTC3-208ENST00000428693 OR5B2Q96R09 309 aa10.73□□□□□ -0.69
TTC3-208ENST00000428693 PIP5K1AQ99755 562 aa10.73□□□□□ -0.69
TTC3-208ENST00000428693 PAIP2Q9BPZ3 127 aaKnown RBP10.73□□□□□ -0.69
TTC3-208ENST00000428693 DPY30Q9C005 99 aa10.73□□□□□ -0.69
TTC3-208ENST00000428693 KCNK9Q9NPC2 374 aa10.73□□□□□ -0.69
TTC3-208ENST00000428693 GPATCH2Q9NW75 528 aa10.73□□□□□ -0.69
TTC3-208ENST00000428693 NOP53Q9NZM5 478 aaKnown RBP10.73□□□□□ -0.69
TTC3-208ENST00000428693 MKLN1Q9UL63 735 aa10.73□□□□□ -0.69
TTC3-208ENST00000428693 DTNAQ9Y4J8 743 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms