RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 PIK3R3Q92569 461 aa6.74□□□□□ -1.33
CNOT4-206ENST00000428680 NARS2Q96I59 477 aaKnown RBP6.74□□□□□ -1.33
CNOT4-206ENST00000428680 SMIM14Q96QK8 99 aa6.74□□□□□ -1.33
CNOT4-206ENST00000428680 IL4I1Q96RQ9 567 aa6.74□□□□□ -1.33
CNOT4-206ENST00000428680 PAPOLGQ9BWT3 736 aaKnown RBP6.74□□□□□ -1.33
CNOT4-206ENST00000428680 CXCL16Q9H2A7 254 aa6.74□□□□□ -1.33
CNOT4-206ENST00000428680 DMRT3Q9NQL9 472 aa6.74□□□□□ -1.33
CNOT4-206ENST00000428680 PAK1IP1Q9NWT1 392 aaPredicted RBP6.74□□□□□ -1.33
CNOT4-206ENST00000428680 VNN3Q9NY84 501 aa6.74□□□□□ -1.33
CNOT4-206ENST00000428680 REXO2Q9Y3B8 237 aaKnown RBP6.74□□□□□ -1.33
CNOT4-206ENST00000428680 OR51B4Q9Y5P0 310 aa6.74□□□□□ -1.33
CNOT4-206ENST00000428680 A0A087WXM4 84 aa6.74□□□□□ -1.33
CNOT4-206ENST00000428680 LNP1A1A4G5 178 aa6.74□□□□□ -1.33
CNOT4-206ENST00000428680 PRSS44E7EML9 344 aa6.74□□□□□ -1.33
CNOT4-206ENST00000428680 BCKDKO14874 412 aa6.74□□□□□ -1.33
CNOT4-206ENST00000428680 GPR39O43194 453 aa6.74□□□□□ -1.33
CNOT4-206ENST00000428680 ZNF264O43296 627 aa6.74□□□□□ -1.33
CNOT4-206ENST00000428680 CISD3P0C7P0 127 aa6.74□□□□□ -1.33
CNOT4-206ENST00000428680 RAC2P15153 192 aa6.74□□□□□ -1.33
CNOT4-206ENST00000428680 ELAVL4P26378 380 aaKnown RBP6.74□□□□□ -1.33
CNOT4-206ENST00000428680 ECHS1P30084 290 aa6.74□□□□□ -1.33
CNOT4-206ENST00000428680 CRISP1P54107 249 aa6.74□□□□□ -1.33
CNOT4-206ENST00000428680 CDH11P55287 796 aa6.74□□□□□ -1.33
CNOT4-206ENST00000428680 UFM1P61960 85 aa6.74□□□□□ -1.33
CNOT4-206ENST00000428680 POU4F3Q15319 338 aa6.74□□□□□ -1.33
CNOT4-206ENST00000428680 ISXQ2M1V0 245 aa6.74□□□□□ -1.33
CNOT4-206ENST00000428680 RAB6CQ53S08 254 aa6.74□□□□□ -1.33
CNOT4-206ENST00000428680 ZNF678Q5SXM1 525 aa6.74□□□□□ -1.33
CNOT4-206ENST00000428680 ATG9BQ674R7 924 aa6.74□□□□□ -1.33
CNOT4-206ENST00000428680 PAMR1Q6UXH9 720 aa6.74□□□□□ -1.33
CNOT4-206ENST00000428680 B3GNT6Q6ZMB0 384 aa6.74□□□□□ -1.33
CNOT4-206ENST00000428680 PDSS2Q86YH6 399 aa6.74□□□□□ -1.33
CNOT4-206ENST00000428680 ZCCHC7Q8N3Z6 543 aaKnown RBP6.74□□□□□ -1.33
CNOT4-206ENST00000428680 OR7A2PQ8NGA2 310 aa6.74□□□□□ -1.33
CNOT4-206ENST00000428680 OR4D9Q8NGE8 314 aa6.74□□□□□ -1.33
CNOT4-206ENST00000428680 DCLRE1CQ96SD1 692 aaKnown RBP6.74□□□□□ -1.33
CNOT4-206ENST00000428680 RAB6CQ9H0N0 254 aa6.74□□□□□ -1.33
CNOT4-206ENST00000428680 MYNNQ9NPC7 610 aa6.74□□□□□ -1.33
CNOT4-206ENST00000428680 TUBD1Q9UJT1 453 aa6.74□□□□□ -1.33
CNOT4-206ENST00000428680 FBXL4Q9UKA2 621 aa6.74□□□□□ -1.33
CNOT4-206ENST00000428680 PCOLCE2Q9UKZ9 415 aa6.74□□□□□ -1.33
CNOT4-206ENST00000428680 MGAT4AQ9UM21 535 aa6.74□□□□□ -1.33
CNOT4-206ENST00000428680 NPFFR2Q9Y5X5 522 aa6.74□□□□□ -1.33
CNOT4-206ENST00000428680 ZFHX2Q9C0A1 2572 aaPredicted RBP6.73□□□□□ -1.33
CNOT4-206ENST00000428680 A0A087WV48 116 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 A0A0G2JPF8 293 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 TRAPPC13A5PLN9 417 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 CXorf49A8MYA2 514 aaPredicted RBP6.73□□□□□ -1.33
CNOT4-206ENST00000428680 HNRNPCL3B7ZW38 293 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 M0R1B8 84 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 ARPC2O15144 300 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 CLPTM1O96005 669 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 EIF4EP06730 217 aaKnown RBP6.73□□□□□ -1.33
CNOT4-206ENST00000428680 HNRNPCL4P0DMR1 293 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 DBTP11182 482 aaKnown RBP6.73□□□□□ -1.33
CNOT4-206ENST00000428680 ACVR1BP36896 505 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 HTR5AP47898 357 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 DUSP2Q05923 314 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 DPTQ07507 201 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 ABRAXAS1Q6UWZ7 409 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 HACD2Q6Y1H2 254 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 CLEC14AQ86T13 490 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 KLHL36Q8N4N3 616 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 OR52N2Q8NGI0 321 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 AENQ8WTP8 325 aaKnown RBP6.73□□□□□ -1.33
CNOT4-206ENST00000428680 INTS12Q96CB8 462 aaKnown RBP6.73□□□□□ -1.33
CNOT4-206ENST00000428680 SLC30A2Q9BRI3 323 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 URM1Q9BTM9 101 aaKnown RBP6.73□□□□□ -1.33
CNOT4-206ENST00000428680 TRIM8Q9BZR9 551 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 MARCH7Q9H992 704 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 ELOVL3Q9HB03 270 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 MYO15AQ9UKN7 3530 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 TNRC18O15417 2968 aaPredicted RBP6.73□□□□□ -1.33
CNOT4-206ENST00000428680 C12orf71A8MTZ7 269 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 CENPBD1B2RD01 187 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 ZNF879B4DU55 563 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 C21orf140B9A014 251 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 CBX7O95931 251 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 HMGN2P05204 90 aaKnown RBP6.73□□□□□ -1.33
CNOT4-206ENST00000428680 CD3GP09693 182 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 LIPCP11150 499 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 ZNF44P15621 663 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 RPL34P49207 117 aaKnown RBP6.73□□□□□ -1.33
CNOT4-206ENST00000428680 CLDN17P56750 224 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 TRA2BP62995 288 aaKnown RBP6.73□□□□□ -1.33
CNOT4-206ENST00000428680 ANKRD34AQ69YU3 496 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 RPS27LQ71UM5 84 aaKnown RBP6.73□□□□□ -1.33
CNOT4-206ENST00000428680 MKXQ8IYA7 352 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 ARMC10Q8N2F6 343 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 ARRDC2Q8TBH0 407 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 RSPRY1Q96DX4 576 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 FBXL20Q96IG2 436 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 OR10A2Q9H208 303 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 OPA3Q9H6K4 179 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 TMEM9Q9P0T7 183 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 B3GALT1Q9Y5Z6 326 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 PCNX1Q96RV3 2341 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 IGHV1OR21-1A0A087WYE8 117 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 PDLIM1O00151 329 aa6.73□□□□□ -1.33
CNOT4-206ENST00000428680 EDF1O60869 148 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms