RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 C20orf204Q6ZNR8 217 aa13.83□□□□□ -0.2
SEC13-210ENST00000428626 CLEC4FQ8N1N0 589 aa13.83□□□□□ -0.2
SEC13-210ENST00000428626 OR5D16Q8NGK9 328 aa13.83□□□□□ -0.2
SEC13-210ENST00000428626 GPR119Q8TDV5 335 aa13.83□□□□□ -0.2
SEC13-210ENST00000428626 TMEM204Q9BSN7 226 aa13.83□□□□□ -0.2
SEC13-210ENST00000428626 ACTR6Q9GZN1 396 aa13.83□□□□□ -0.2
SEC13-210ENST00000428626 EML4Q9HC35 981 aaKnown RBP13.83□□□□□ -0.2
SEC13-210ENST00000428626 STOML1Q9UBI4 398 aa13.83□□□□□ -0.2
SEC13-210ENST00000428626 ING1Q9UK53 422 aaPredicted RBP13.83□□□□□ -0.2
SEC13-210ENST00000428626 ZNF195O14628 629 aa13.82□□□□□ -0.2
SEC13-210ENST00000428626 ITM2AO43736 263 aa13.82□□□□□ -0.2
SEC13-210ENST00000428626 TYROBPO43914 113 aa13.82□□□□□ -0.2
SEC13-210ENST00000428626 LYPLA1O75608 230 aaPredicted RBP13.82□□□□□ -0.2
SEC13-210ENST00000428626 TUBBP07437 444 aa13.82□□□□□ -0.2
SEC13-210ENST00000428626 BPGMP07738 259 aa13.82□□□□□ -0.2
SEC13-210ENST00000428626 G6PDP11413 515 aa13.82□□□□□ -0.2
SEC13-210ENST00000428626 PRKCAP17252 672 aa13.82□□□□□ -0.2
SEC13-210ENST00000428626 PSMB1P20618 241 aaKnown RBP13.82□□□□□ -0.2
SEC13-210ENST00000428626 ME2P23368 584 aa13.82□□□□□ -0.2
SEC13-210ENST00000428626 EDNRAP25101 427 aa13.82□□□□□ -0.2
SEC13-210ENST00000428626 MAPK1P28482 360 aa13.82□□□□□ -0.2
SEC13-210ENST00000428626 PTH2RP49190 550 aa13.82□□□□□ -0.2
SEC13-210ENST00000428626 P2RX1P51575 399 aa13.82□□□□□ -0.2
SEC13-210ENST00000428626 ATP12AP54707 1039 aa13.82□□□□□ -0.2
SEC13-210ENST00000428626 HBA1P69905 142 aa13.82□□□□□ -0.2
SEC13-210ENST00000428626 TMEM176BQ3YBM2 270 aaPredicted RBP13.82□□□□□ -0.2
SEC13-210ENST00000428626 PRSS57Q6UWY2 283 aa13.82□□□□□ -0.2
SEC13-210ENST00000428626 TFAP2EQ6VUC0 442 aa13.82□□□□□ -0.2
SEC13-210ENST00000428626 MTERF4Q7Z6M4 381 aaKnown RBP13.82□□□□□ -0.2
SEC13-210ENST00000428626 ATG4DQ86TL0 474 aaPredicted RBP13.82□□□□□ -0.2
SEC13-210ENST00000428626 WFDC8Q8IUA0 241 aa13.82□□□□□ -0.2
SEC13-210ENST00000428626 TUSC5Q8IXB3 177 aa13.82□□□□□ -0.2
SEC13-210ENST00000428626 CLECL1Q8IZS7 167 aa13.82□□□□□ -0.2
SEC13-210ENST00000428626 GABRG1Q8N1C3 465 aa13.82□□□□□ -0.2
SEC13-210ENST00000428626 RIBC1Q8N443 379 aaPredicted RBP13.82□□□□□ -0.2
SEC13-210ENST00000428626 FNDC5Q8NAU1 212 aa13.82□□□□□ -0.2
SEC13-210ENST00000428626 OR56A1Q8NGH5 318 aa13.82□□□□□ -0.2
SEC13-210ENST00000428626 LILRB1Q8NHL6 650 aaPredicted RBP13.82□□□□□ -0.2
SEC13-210ENST00000428626 RAB3IL1Q8TBN0 382 aa13.82□□□□□ -0.2
SEC13-210ENST00000428626 ADAMTS15Q8TE58 950 aa13.82□□□□□ -0.2
SEC13-210ENST00000428626 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.82□□□□□ -0.2
SEC13-210ENST00000428626 PLPPR2Q96GM1 343 aa13.82□□□□□ -0.2
SEC13-210ENST00000428626 OR7D2Q96RA2 312 aa13.82□□□□□ -0.2
SEC13-210ENST00000428626 GSX2Q9BZM3 304 aa13.82□□□□□ -0.2
SEC13-210ENST00000428626 GLRX2Q9NS18 164 aa13.82□□□□□ -0.2
SEC13-210ENST00000428626 ACTL7BQ9Y614 415 aa13.82□□□□□ -0.2
SEC13-210ENST00000428626 HIVEP2P31629 2446 aa13.81□□□□□ -0.2
SEC13-210ENST00000428626 IGHV3-15A0A0B4J1V0 119 aa13.81□□□□□ -0.2
SEC13-210ENST00000428626 SMAD7O15105 426 aaKnown RBP13.81□□□□□ -0.2
SEC13-210ENST00000428626 HSPA4LO95757 839 aa13.81□□□□□ -0.2
SEC13-210ENST00000428626 PPP3CBP16298 524 aa13.81□□□□□ -0.2
SEC13-210ENST00000428626 ATP6V1C1P21283 382 aa13.81□□□□□ -0.2
SEC13-210ENST00000428626 ENPP1P22413 925 aa13.81□□□□□ -0.2
SEC13-210ENST00000428626 ELK4P28324 431 aa13.81□□□□□ -0.2
SEC13-210ENST00000428626 RPL3P39023 403 aaKnown RBP13.81□□□□□ -0.2
SEC13-210ENST00000428626 EIF1P41567 113 aaKnown RBP13.81□□□□□ -0.2
SEC13-210ENST00000428626 SPDYE7PQ495Y7 208 aa13.81□□□□□ -0.2
SEC13-210ENST00000428626 SEZ6L2Q6UXD5 910 aa13.81□□□□□ -0.2
SEC13-210ENST00000428626 BEND4Q6ZU67 534 aa13.81□□□□□ -0.2
SEC13-210ENST00000428626 ATP6V1C2Q8NEY4 427 aa13.81□□□□□ -0.2
SEC13-210ENST00000428626 SFXN5Q8TD22 340 aa13.81□□□□□ -0.2
SEC13-210ENST00000428626 S100PBPQ96BU1 408 aa13.81□□□□□ -0.2
SEC13-210ENST00000428626 PKNOX2Q96KN3 472 aa13.81□□□□□ -0.2
SEC13-210ENST00000428626 SDF2Q99470 211 aa13.81□□□□□ -0.2
SEC13-210ENST00000428626 DUSP26Q9BV47 211 aa13.81□□□□□ -0.2
SEC13-210ENST00000428626 HHATLQ9HCP6 504 aa13.81□□□□□ -0.2
SEC13-210ENST00000428626 FAF1Q9UNN5 650 aaPredicted RBP13.81□□□□□ -0.2
SEC13-210ENST00000428626 GPR52Q9Y2T5 361 aa13.81□□□□□ -0.2
SEC13-210ENST00000428626 DTNAQ9Y4J8 743 aa13.81□□□□□ -0.2
SEC13-210ENST00000428626 UQCRHLA0A096LP55 91 aa13.8□□□□□ -0.2
SEC13-210ENST00000428626 A0A1W2PNR3 127 aa13.8□□□□□ -0.2
SEC13-210ENST00000428626 ZNF814B7Z6K7 855 aa13.8□□□□□ -0.2
SEC13-210ENST00000428626 ETV2O00321 342 aaPredicted RBP13.8□□□□□ -0.2
SEC13-210ENST00000428626 FCMRO60667 390 aa13.8□□□□□ -0.2
SEC13-210ENST00000428626 BCAS1O75363 584 aaPredicted RBP13.8□□□□□ -0.2
SEC13-210ENST00000428626 NUDT14O95848 222 aa13.8□□□□□ -0.2
SEC13-210ENST00000428626 C1QCP02747 245 aa13.8□□□□□ -0.2
SEC13-210ENST00000428626 ADH6P28332 368 aa13.8□□□□□ -0.2
SEC13-210ENST00000428626 SUMO3P55854 103 aaPredicted RBP13.8□□□□□ -0.2
SEC13-210ENST00000428626 C21orf58P58505 322 aa13.8□□□□□ -0.2
SEC13-210ENST00000428626 CAPRIN1Q14444 709 aaKnown RBP13.8□□□□□ -0.2
SEC13-210ENST00000428626 SLC25A53Q5H9E4 307 aa13.8□□□□□ -0.2
SEC13-210ENST00000428626 PDSS1Q5T2R2 415 aa13.8□□□□□ -0.2
SEC13-210ENST00000428626 PDZK1Q5T2W1 519 aa13.8□□□□□ -0.2
SEC13-210ENST00000428626 OR4F3Q6IEY1 312 aa13.8□□□□□ -0.2
SEC13-210ENST00000428626 ALKBH2Q6NS38 261 aa13.8□□□□□ -0.2
SEC13-210ENST00000428626 PLEKHM3Q6ZWE6 761 aa13.8□□□□□ -0.2
SEC13-210ENST00000428626 FCRLAQ7L513 359 aa13.8□□□□□ -0.2
SEC13-210ENST00000428626 ZNF614Q8N883 585 aa13.8□□□□□ -0.2
SEC13-210ENST00000428626 RFWD2Q8NHY2 731 aa13.8□□□□□ -0.2
SEC13-210ENST00000428626 ZFP90Q8TF47 636 aa13.8□□□□□ -0.2
SEC13-210ENST00000428626 AENQ8WTP8 325 aaKnown RBP13.8□□□□□ -0.2
SEC13-210ENST00000428626 CPNE4Q96A23 557 aaPredicted RBP13.8□□□□□ -0.2
SEC13-210ENST00000428626 TUBGCP3Q96CW5 907 aa13.8□□□□□ -0.2
SEC13-210ENST00000428626 BHLHE41Q9C0J9 482 aaPredicted RBP13.8□□□□□ -0.2
SEC13-210ENST00000428626 C20orf27Q9GZN8 174 aa13.8□□□□□ -0.2
SEC13-210ENST00000428626 KLHL13Q9P2N7 655 aa13.8□□□□□ -0.2
SEC13-210ENST00000428626 GPC6Q9Y625 555 aaPredicted RBP13.8□□□□□ -0.2
SEC13-210ENST00000428626 SONP18583 2426 aaKnown RBP13.8□□□□□ -0.2
SEC13-210ENST00000428626 HS3ST1O14792 307 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms