RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 ARPC1BO15143 372 aaKnown RBP10.03□□□□□ -0.8
ATP2C1-204ENST00000428331 CXCL14O95715 111 aa10.03□□□□□ -0.8
ATP2C1-204ENST00000428331 PCCBP05166 539 aa10.03□□□□□ -0.8
ATP2C1-204ENST00000428331 MAT2AP31153 395 aaKnown RBP10.03□□□□□ -0.8
ATP2C1-204ENST00000428331 GSG1Q2KHT4 349 aa10.03□□□□□ -0.8
ATP2C1-204ENST00000428331 LGALSLQ3ZCW2 172 aaPredicted RBP10.03□□□□□ -0.8
ATP2C1-204ENST00000428331 EOGTQ5NDL2 527 aa10.03□□□□□ -0.8
ATP2C1-204ENST00000428331 KANSL1Q7Z3B3 1105 aa10.03□□□□□ -0.8
ATP2C1-204ENST00000428331 ADGRG3Q86Y34 549 aa10.03□□□□□ -0.8
ATP2C1-204ENST00000428331 OR9A2Q8NGT5 310 aa10.03□□□□□ -0.8
ATP2C1-204ENST00000428331 TMEM239Q8WW34 195 aa10.03□□□□□ -0.8
ATP2C1-204ENST00000428331 RIT1Q92963 219 aa10.03□□□□□ -0.8
ATP2C1-204ENST00000428331 CAPN10Q9HC96 672 aa10.03□□□□□ -0.8
ATP2C1-204ENST00000428331 WASH6PQ9NQA3 447 aa10.03□□□□□ -0.8
ATP2C1-204ENST00000428331 FXYD6-FXYD2A0A087WZ82 144 aa10.03□□□□□ -0.8
ATP2C1-204ENST00000428331 A8MUA0 341 aa10.03□□□□□ -0.8
ATP2C1-204ENST00000428331 B4GALT2O60909 372 aa10.03□□□□□ -0.8
ATP2C1-204ENST00000428331 HRGP04196 525 aa10.03□□□□□ -0.8
ATP2C1-204ENST00000428331 SYPP08247 313 aa10.03□□□□□ -0.8
ATP2C1-204ENST00000428331 TEAD1P28347 426 aa10.03□□□□□ -0.8
ATP2C1-204ENST00000428331 ACTA2P62736 377 aa10.03□□□□□ -0.8
ATP2C1-204ENST00000428331 ACTG2P63267 376 aa10.03□□□□□ -0.8
ATP2C1-204ENST00000428331 PUDPQ08623 228 aa10.03□□□□□ -0.8
ATP2C1-204ENST00000428331 ST3GAL2Q16842 350 aa10.03□□□□□ -0.8
ATP2C1-204ENST00000428331 PUS10Q3MIT2 529 aaKnown RBP10.03□□□□□ -0.8
ATP2C1-204ENST00000428331 ADIPOR2Q86V24 386 aa10.03□□□□□ -0.8
ATP2C1-204ENST00000428331 CYB561A3Q8NBI2 242 aa10.03□□□□□ -0.8
ATP2C1-204ENST00000428331 OR5K2Q8NHB8 316 aa10.03□□□□□ -0.8
ATP2C1-204ENST00000428331 ARHGDIGQ99819 225 aa10.03□□□□□ -0.8
ATP2C1-204ENST00000428331 C1QTNF7Q9BXJ2 289 aa10.03□□□□□ -0.8
ATP2C1-204ENST00000428331 ARL6Q9H0F7 186 aa10.03□□□□□ -0.8
ATP2C1-204ENST00000428331 FXYD6Q9H0Q3 95 aa10.03□□□□□ -0.8
ATP2C1-204ENST00000428331 TBC1D3KA0A087X1G2 549 aa10.02□□□□□ -0.8
ATP2C1-204ENST00000428331 TBC1D3BA6NDS4 549 aa10.02□□□□□ -0.8
ATP2C1-204ENST00000428331 TBC1D3FA6NER0 549 aaPredicted RBP10.02□□□□□ -0.8
ATP2C1-204ENST00000428331 ZNF593O00488 134 aaPredicted RBP10.02□□□□□ -0.8
ATP2C1-204ENST00000428331 MAN2B1O00754 1011 aa10.02□□□□□ -0.8
ATP2C1-204ENST00000428331 PIP5K1CO60331 668 aa10.02□□□□□ -0.8
ATP2C1-204ENST00000428331 PRKRAO75569 313 aaKnown RBP10.02□□□□□ -0.8
ATP2C1-204ENST00000428331 FGF19O95750 216 aa10.02□□□□□ -0.8
ATP2C1-204ENST00000428331 UGT2B7P16662 529 aa10.02□□□□□ -0.8
ATP2C1-204ENST00000428331 ACADLP28330 430 aa10.02□□□□□ -0.8
ATP2C1-204ENST00000428331 SLC6A6P31641 620 aa10.02□□□□□ -0.8
ATP2C1-204ENST00000428331 OPRD1P41143 372 aa10.02□□□□□ -0.8
ATP2C1-204ENST00000428331 CCR9P51686 369 aa10.02□□□□□ -0.8
ATP2C1-204ENST00000428331 EPHA5P54756 1037 aa10.02□□□□□ -0.8
ATP2C1-204ENST00000428331 GAS1P54826 345 aa10.02□□□□□ -0.8
ATP2C1-204ENST00000428331 PRDX1Q06830 199 aaKnown RBP10.02□□□□□ -0.8
ATP2C1-204ENST00000428331 CAMK2DQ13557 499 aa10.02□□□□□ -0.8
ATP2C1-204ENST00000428331 TBC1D3GQ6DHY5 549 aa10.02□□□□□ -0.8
ATP2C1-204ENST00000428331 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.02□□□□□ -0.8
ATP2C1-204ENST00000428331 NRROSQ86YC3 692 aa10.02□□□□□ -0.8
ATP2C1-204ENST00000428331 SUSD6Q92537 303 aa10.02□□□□□ -0.8
ATP2C1-204ENST00000428331 YIPF5Q969M3 257 aa10.02□□□□□ -0.8
ATP2C1-204ENST00000428331 TEAD3Q99594 435 aa10.02□□□□□ -0.8
ATP2C1-204ENST00000428331 VN1R3Q9BXE9 311 aa10.02□□□□□ -0.8
ATP2C1-204ENST00000428331 SLC38A1Q9H2H9 487 aa10.02□□□□□ -0.8
ATP2C1-204ENST00000428331 XKR8Q9H6D3 395 aa10.02□□□□□ -0.8
ATP2C1-204ENST00000428331 ADAP2Q9NPF8 381 aa10.02□□□□□ -0.8
ATP2C1-204ENST00000428331 ACSL5Q9ULC5 683 aa10.02□□□□□ -0.8
ATP2C1-204ENST00000428331 OR5K3A6NET4 321 aa10.02□□□□□ -0.81
ATP2C1-204ENST00000428331 K7ESM1 405 aa10.02□□□□□ -0.81
ATP2C1-204ENST00000428331 CDK2AP1O14519 115 aa10.02□□□□□ -0.81
ATP2C1-204ENST00000428331 TGM5O43548 720 aa10.02□□□□□ -0.81
ATP2C1-204ENST00000428331 SULT1A3P0DMM9 295 aa10.02□□□□□ -0.81
ATP2C1-204ENST00000428331 SULT1A4P0DMN0 295 aa10.02□□□□□ -0.81
ATP2C1-204ENST00000428331 CMPK1P30085 196 aa10.02□□□□□ -0.81
ATP2C1-204ENST00000428331 GDI2P50395 445 aaKnown RBP10.02□□□□□ -0.81
ATP2C1-204ENST00000428331 OR12D2P58182 307 aa10.02□□□□□ -0.81
ATP2C1-204ENST00000428331 BAMBIQ13145 260 aa10.02□□□□□ -0.81
ATP2C1-204ENST00000428331 GAS6Q14393 721 aa10.02□□□□□ -0.81
ATP2C1-204ENST00000428331 PON3Q15166 354 aa10.02□□□□□ -0.81
ATP2C1-204ENST00000428331 SLC25A35Q3KQZ1 300 aa10.02□□□□□ -0.81
ATP2C1-204ENST00000428331 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.02□□□□□ -0.813e-7■■■□□ 18.5
ATP2C1-204ENST00000428331 RNF113BQ8IZP6 322 aaKnown RBP10.02□□□□□ -0.81
ATP2C1-204ENST00000428331 COX18Q8N8Q8 333 aa10.02□□□□□ -0.81
ATP2C1-204ENST00000428331 VN1R2Q8NFZ6 395 aa10.02□□□□□ -0.81
ATP2C1-204ENST00000428331 LINC00615Q96LM1 132 aaPredicted RBP10.02□□□□□ -0.81
ATP2C1-204ENST00000428331 TCF7L1Q9HCS4 588 aa10.02□□□□□ -0.81
ATP2C1-204ENST00000428331 C14orf105Q9NVL8 296 aa10.02□□□□□ -0.81
ATP2C1-204ENST00000428331 GNG8Q9UK08 70 aa10.02□□□□□ -0.81
ATP2C1-204ENST00000428331 ZNF443Q9Y2A4 671 aaPredicted RBP10.02□□□□□ -0.81
ATP2C1-204ENST00000428331 PRAMEF27A3QJZ7 478 aa10.02□□□□□ -0.81
ATP2C1-204ENST00000428331 CDHR4A6H8M9 788 aa10.02□□□□□ -0.81
ATP2C1-204ENST00000428331 PLPP2O43688 288 aa10.02□□□□□ -0.81
ATP2C1-204ENST00000428331 SBK2P0C263 348 aa10.02□□□□□ -0.81
ATP2C1-204ENST00000428331 NFYAP23511 347 aaPredicted RBP10.02□□□□□ -0.81
ATP2C1-204ENST00000428331 DDX6P26196 483 aaKnown RBP eCLIP10.02□□□□□ -0.81
ATP2C1-204ENST00000428331 VEGFCP49767 419 aa10.02□□□□□ -0.81
ATP2C1-204ENST00000428331 CSNK1G2P78368 415 aa10.02□□□□□ -0.81
ATP2C1-204ENST00000428331 EFNB1P98172 346 aa10.02□□□□□ -0.81
ATP2C1-204ENST00000428331 TMEM69Q5SWH9 247 aa10.02□□□□□ -0.81
ATP2C1-204ENST00000428331 PRSS45Q7RTY3 260 aa10.02□□□□□ -0.81
ATP2C1-204ENST00000428331 OR11H4Q8NGC9 324 aa10.02□□□□□ -0.81
ATP2C1-204ENST00000428331 NARS2Q96I59 477 aaKnown RBP10.02□□□□□ -0.81
ATP2C1-204ENST00000428331 NOX3Q9HBY0 568 aa10.02□□□□□ -0.81
ATP2C1-204ENST00000428331 SDHAF2Q9NX18 166 aa10.02□□□□□ -0.81
ATP2C1-204ENST00000428331 KIF25Q9UIL4 384 aa10.02□□□□□ -0.81
ATP2C1-204ENST00000428331 CCL26Q9Y258 94 aa10.02□□□□□ -0.81
ATP2C1-204ENST00000428331 FRKP42685 505 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms