RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 PDZK1Q5T2W1 519 aa16.54■□□□□ 0.24
GPC1-205ENST00000427506 TNFAIP8L2Q6P589 184 aaPredicted RBP16.54■□□□□ 0.24
GPC1-205ENST00000427506 FAM214BQ7L5A3 538 aa16.54■□□□□ 0.24
GPC1-205ENST00000427506 TOR1AIP2Q8NFQ8 470 aa16.54■□□□□ 0.24
GPC1-205ENST00000427506 FBXO27Q8NI29 283 aa16.54■□□□□ 0.24
GPC1-205ENST00000427506 XAGE5Q8WWM1 108 aa16.54■□□□□ 0.24
GPC1-205ENST00000427506 TLCD1Q96CP7 247 aa16.54■□□□□ 0.24
GPC1-205ENST00000427506 KLHL15Q96M94 604 aa16.54■□□□□ 0.24
GPC1-205ENST00000427506 ZBTB18Q99592 522 aa16.54■□□□□ 0.24
GPC1-205ENST00000427506 SLC39A3Q9BRY0 314 aa16.54■□□□□ 0.24
GPC1-205ENST00000427506 NMUR2Q9GZQ4 415 aa16.54■□□□□ 0.24
GPC1-205ENST00000427506 AIG1Q9NVV5 245 aa16.54■□□□□ 0.24
GPC1-205ENST00000427506 MKLN1Q9UL63 735 aa16.54■□□□□ 0.24
GPC1-205ENST00000427506 ICAM5Q9UMF0 924 aa16.54■□□□□ 0.24
GPC1-205ENST00000427506 EMC9Q9Y3B6 208 aa16.54■□□□□ 0.24
GPC1-205ENST00000427506 GPC6Q9Y625 555 aaPredicted RBP16.54■□□□□ 0.24
GPC1-205ENST00000427506 A0A0J9YW62 118 aa16.53■□□□□ 0.24
GPC1-205ENST00000427506 SERINC4A6NH21 518 aa16.53■□□□□ 0.24
GPC1-205ENST00000427506 ADAMDEC1O15204 470 aa16.53■□□□□ 0.24
GPC1-205ENST00000427506 ZNF264O43296 627 aa16.53■□□□□ 0.24
GPC1-205ENST00000427506 EIF4E2O60573 245 aaKnown RBP16.53■□□□□ 0.24
GPC1-205ENST00000427506 FCMRO60667 390 aa16.53■□□□□ 0.24
GPC1-205ENST00000427506 POU2F1P14859 743 aa16.53■□□□□ 0.24
GPC1-205ENST00000427506 IL11P20809 199 aa16.53■□□□□ 0.24
GPC1-205ENST00000427506 CD79BP40259 229 aa16.53■□□□□ 0.24
GPC1-205ENST00000427506 SLC6A8P48029 635 aa16.53■□□□□ 0.24
GPC1-205ENST00000427506 IST1P53990 364 aa16.53■□□□□ 0.24
GPC1-205ENST00000427506 CTU2Q2VPK5 515 aaKnown RBP16.53■□□□□ 0.24
GPC1-205ENST00000427506 ZNF474Q6S9Z5 364 aaPredicted RBP16.53■□□□□ 0.24
GPC1-205ENST00000427506 OLIG3Q7RTU3 272 aa16.53■□□□□ 0.24
GPC1-205ENST00000427506 ZNF610Q8N9Z0 462 aa16.53■□□□□ 0.24
GPC1-205ENST00000427506 ATP6V1C2Q8NEY4 427 aa16.53■□□□□ 0.24
GPC1-205ENST00000427506 MIPOL1Q8TD10 442 aa16.53■□□□□ 0.24
GPC1-205ENST00000427506 GPR119Q8TDV5 335 aa16.53■□□□□ 0.24
GPC1-205ENST00000427506 OSTF1Q92882 214 aa16.53■□□□□ 0.24
GPC1-205ENST00000427506 RAB8BQ92930 207 aa16.53■□□□□ 0.24
GPC1-205ENST00000427506 ADGRG7Q96K78 797 aa16.53■□□□□ 0.24
GPC1-205ENST00000427506 TEX37Q96LM6 180 aa16.53■□□□□ 0.24
GPC1-205ENST00000427506 SLC35A5Q9BS91 424 aa16.53■□□□□ 0.24
GPC1-205ENST00000427506 LIME1Q9H400 295 aa16.53■□□□□ 0.24
GPC1-205ENST00000427506 CLEC4AQ9UMR7 237 aa16.53■□□□□ 0.24
GPC1-205ENST00000427506 MED12LQ86YW9 2145 aa16.52■□□□□ 0.24
GPC1-205ENST00000427506 GJE1A6NN92 205 aa16.52■□□□□ 0.24
GPC1-205ENST00000427506 C9JVG2 144 aa16.52■□□□□ 0.24
GPC1-205ENST00000427506 ZNF195O14628 629 aa16.52■□□□□ 0.24
GPC1-205ENST00000427506 GOSR1O95249 250 aa16.52■□□□□ 0.24
GPC1-205ENST00000427506 CD8BP10966 210 aa16.52■□□□□ 0.24
GPC1-205ENST00000427506 ELK4P28324 431 aa16.52■□□□□ 0.24
GPC1-205ENST00000427506 ADH6P28332 368 aa16.52■□□□□ 0.24
GPC1-205ENST00000427506 KHKP50053 298 aa16.52■□□□□ 0.24
GPC1-205ENST00000427506 CARD18P57730 90 aa16.52■□□□□ 0.24
GPC1-205ENST00000427506 CBFBQ13951 182 aa16.52■□□□□ 0.24
GPC1-205ENST00000427506 POU4F3Q15319 338 aa16.52■□□□□ 0.24
GPC1-205ENST00000427506 TESK1Q15569 626 aa16.52■□□□□ 0.24
GPC1-205ENST00000427506 TOMM34Q15785 309 aaPredicted RBP16.52■□□□□ 0.24
GPC1-205ENST00000427506 SAXO2Q658L1 398 aa16.52■□□□□ 0.24
GPC1-205ENST00000427506 TRIML2Q8N7C3 387 aa16.52■□□□□ 0.24
GPC1-205ENST00000427506 OR5W2Q8NH69 310 aa16.52■□□□□ 0.24
GPC1-205ENST00000427506 NINJ1Q92982 152 aa16.52■□□□□ 0.24
GPC1-205ENST00000427506 NEURL3Q96EH8 262 aa16.52■□□□□ 0.24
GPC1-205ENST00000427506 REXO5Q96IC2 774 aaKnown RBP16.52■□□□□ 0.24
GPC1-205ENST00000427506 GMPPAQ96IJ6 420 aaPredicted RBP16.52■□□□□ 0.24
GPC1-205ENST00000427506 PANX1Q96RD7 426 aa16.52■□□□□ 0.24
GPC1-205ENST00000427506 TIGARQ9NQ88 270 aa16.52■□□□□ 0.24
GPC1-205ENST00000427506 CCM2LQ9NUG4 571 aaPredicted RBP16.52■□□□□ 0.24
GPC1-205ENST00000427506 ELOVL5Q9NYP7 299 aa16.52■□□□□ 0.24
GPC1-205ENST00000427506 BTNL2Q9UIR0 455 aa16.52■□□□□ 0.24
GPC1-205ENST00000427506 ST6GALNAC2Q9UJ37 374 aa16.52■□□□□ 0.24
GPC1-205ENST00000427506 UGT2B17O75795 530 aa16.51■□□□□ 0.23
GPC1-205ENST00000427506 CSTAP01040 98 aa16.51■□□□□ 0.23
GPC1-205ENST00000427506 CGAP01215 116 aa16.51■□□□□ 0.23
GPC1-205ENST00000427506 CD1EP15812 388 aa16.51■□□□□ 0.23
GPC1-205ENST00000427506 PRKCAP17252 672 aa16.51■□□□□ 0.23
GPC1-205ENST00000427506 DNASE1P24855 282 aa16.51■□□□□ 0.23
GPC1-205ENST00000427506 QPRTQ15274 297 aa16.51■□□□□ 0.23
GPC1-205ENST00000427506 ZNF141Q15928 474 aa16.51■□□□□ 0.23
GPC1-205ENST00000427506 EXOC3L2Q2M3D2 409 aa16.51■□□□□ 0.23
GPC1-205ENST00000427506 GPAT3Q53EU6 434 aa16.51■□□□□ 0.23
GPC1-205ENST00000427506 GTF2IRD2BQ6EKJ0 949 aa16.51■□□□□ 0.23
GPC1-205ENST00000427506 HEPHL1Q6MZM0 1159 aa16.51■□□□□ 0.23
GPC1-205ENST00000427506 GTF2IRD2Q86UP8 949 aa16.51■□□□□ 0.23
GPC1-205ENST00000427506 CCDC115Q96NT0 180 aa16.51■□□□□ 0.23
GPC1-205ENST00000427506 OR52E6Q96RD3 313 aa16.51■□□□□ 0.23
GPC1-205ENST00000427506 THUMPD3Q9BV44 507 aaKnown RBP16.51■□□□□ 0.23
GPC1-205ENST00000427506 ZNF350Q9GZX5 532 aa16.51■□□□□ 0.23
GPC1-205ENST00000427506 PLEKHA6Q9Y2H5 1048 aa16.51■□□□□ 0.23
GPC1-205ENST00000427506 WDR45Q9Y484 360 aa16.51■□□□□ 0.23
GPC1-205ENST00000427506 GPR45Q9Y5Y3 372 aa16.51■□□□□ 0.23
GPC1-205ENST00000427506 ANKRD17O75179 2603 aaKnown RBP16.51■□□□□ 0.23
GPC1-205ENST00000427506 CCDC154A6NI56 674 aa16.5■□□□□ 0.23
GPC1-205ENST00000427506 SS18L1O75177 396 aaPredicted RBP16.5■□□□□ 0.23
GPC1-205ENST00000427506 PGRP06401 933 aa16.5■□□□□ 0.23
GPC1-205ENST00000427506 PABPC4LP0CB38 370 aaKnown RBP16.5■□□□□ 0.23
GPC1-205ENST00000427506 SHC1P29353 583 aa16.5■□□□□ 0.23
GPC1-205ENST00000427506 IL12AP29459 219 aa16.5■□□□□ 0.23
GPC1-205ENST00000427506 HPCAP84074 193 aa16.5■□□□□ 0.23
GPC1-205ENST00000427506 LRRC74AQ0VAA2 488 aa16.5■□□□□ 0.23
GPC1-205ENST00000427506 GUSBP1Q15486 140 aa16.5■□□□□ 0.23
GPC1-205ENST00000427506 TMEM176BQ3YBM2 270 aaPredicted RBP16.5■□□□□ 0.23
GPC1-205ENST00000427506 SPNS3Q6ZMD2 512 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms