RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 SIDT1Q9NXL6 827 aaKnown RBP11.04□□□□□ -0.64
PTPRN-204ENST00000423636 DENND4AQ7Z401 1863 aa11.03□□□□□ -0.64
PTPRN-204ENST00000423636 OIP5O43482 229 aa11.03□□□□□ -0.64
PTPRN-204ENST00000423636 GDF9O60383 454 aa11.03□□□□□ -0.64
PTPRN-204ENST00000423636 PAHP00439 452 aa11.03□□□□□ -0.64
PTPRN-204ENST00000423636 OPN1LWP04000 364 aa11.03□□□□□ -0.64
PTPRN-204ENST00000423636 MSL3P1P0C860 447 aa11.03□□□□□ -0.64
PTPRN-204ENST00000423636 APEX1P27695 318 aaKnown RBP11.03□□□□□ -0.64
PTPRN-204ENST00000423636 NDUFS1P28331 727 aa11.03□□□□□ -0.64
PTPRN-204ENST00000423636 RCVRNP35243 200 aa11.03□□□□□ -0.64
PTPRN-204ENST00000423636 OR10A3P58181 314 aa11.03□□□□□ -0.64
PTPRN-204ENST00000423636 TSPAN31Q12999 210 aa11.03□□□□□ -0.64
PTPRN-204ENST00000423636 CBLN3Q6UW01 205 aa11.03□□□□□ -0.64
PTPRN-204ENST00000423636 CXXC5Q7LFL8 322 aaKnown RBP11.03□□□□□ -0.64
PTPRN-204ENST00000423636 MARCH9Q86YJ5 346 aa11.03□□□□□ -0.64
PTPRN-204ENST00000423636 BPIFA2Q96DR5 249 aa11.03□□□□□ -0.64
PTPRN-204ENST00000423636 SCARF2Q96GP6 870 aaPredicted RBP11.03□□□□□ -0.64
PTPRN-204ENST00000423636 PHF11Q9UIL8 331 aa11.03□□□□□ -0.64
PTPRN-204ENST00000423636 BOLA1Q9Y3E2 137 aa11.03□□□□□ -0.64
PTPRN-204ENST00000423636 EP300Q09472 2414 aaPredicted RBP11.03□□□□□ -0.64
PTPRN-204ENST00000423636 A0A1W2PRG6 482 aa11.03□□□□□ -0.64
PTPRN-204ENST00000423636 SURF4O15260 269 aa11.03□□□□□ -0.64
PTPRN-204ENST00000423636 HPGDSO60760 199 aa11.03□□□□□ -0.64
PTPRN-204ENST00000423636 OXSR1O95747 527 aaPredicted RBP11.03□□□□□ -0.64
PTPRN-204ENST00000423636 IFNA8P32881 189 aa11.03□□□□□ -0.64
PTPRN-204ENST00000423636 PSMB10P40306 273 aa11.03□□□□□ -0.64
PTPRN-204ENST00000423636 ANXA11P50995 505 aaKnown RBP11.03□□□□□ -0.64
PTPRN-204ENST00000423636 SNRPGP62308 76 aaKnown RBP11.03□□□□□ -0.64
PTPRN-204ENST00000423636 CSNK2BP67870 215 aa11.03□□□□□ -0.64
PTPRN-204ENST00000423636 POU6F2P78424 691 aaPredicted RBP11.03□□□□□ -0.64
PTPRN-204ENST00000423636 E2F1Q01094 437 aa11.03□□□□□ -0.64
PTPRN-204ENST00000423636 MLC1Q15049 377 aa11.03□□□□□ -0.64
PTPRN-204ENST00000423636 P2RY14Q15391 338 aa11.03□□□□□ -0.64
PTPRN-204ENST00000423636 SLC36A4Q6YBV0 504 aa11.03□□□□□ -0.64
PTPRN-204ENST00000423636 TMEM184AQ6ZMB5 413 aa11.03□□□□□ -0.64
PTPRN-204ENST00000423636 SSX6Q7RTT6 188 aa11.03□□□□□ -0.64
PTPRN-204ENST00000423636 POLDIP3Q9BY77 421 aaKnown RBP11.03□□□□□ -0.64
PTPRN-204ENST00000423636 MROQ9BYG7 248 aa11.03□□□□□ -0.64
PTPRN-204ENST00000423636 MMP27Q9H306 513 aa11.03□□□□□ -0.64
PTPRN-204ENST00000423636 PRDM6Q9NQX0 595 aa11.03□□□□□ -0.64
PTPRN-204ENST00000423636 FBXO8Q9NRD0 319 aa11.03□□□□□ -0.64
PTPRN-204ENST00000423636 ING1Q9UK53 422 aaPredicted RBP11.03□□□□□ -0.64
PTPRN-204ENST00000423636 A0A1B0GWA3 101 aa11.02□□□□□ -0.64
PTPRN-204ENST00000423636 TBX19O60806 448 aa11.02□□□□□ -0.64
PTPRN-204ENST00000423636 TMCC2O75069 709 aa11.02□□□□□ -0.64
PTPRN-204ENST00000423636 HOXB6P17509 224 aaKnown RBP11.02□□□□□ -0.64
PTPRN-204ENST00000423636 BMP7P18075 431 aa11.02□□□□□ -0.64
PTPRN-204ENST00000423636 RPL4P36578 427 aaKnown RBP11.02□□□□□ -0.64
PTPRN-204ENST00000423636 SLC1A3P43003 542 aa11.02□□□□□ -0.64
PTPRN-204ENST00000423636 PGGHGQ32M88 737 aa11.02□□□□□ -0.64
PTPRN-204ENST00000423636 ALG10BQ5I7T1 473 aa11.02□□□□□ -0.64
PTPRN-204ENST00000423636 KIAA0895LQ68EN5 471 aa11.02□□□□□ -0.64
PTPRN-204ENST00000423636 ZNF620Q6ZNG0 422 aa11.02□□□□□ -0.64
PTPRN-204ENST00000423636 OAFQ86UD1 273 aa11.02□□□□□ -0.64
PTPRN-204ENST00000423636 OR2I1PQ8NGU4 316 aa11.02□□□□□ -0.64
PTPRN-204ENST00000423636 OR6K6Q8NGW6 343 aa11.02□□□□□ -0.64
PTPRN-204ENST00000423636 S100ZQ8WXG8 99 aa11.02□□□□□ -0.64
PTPRN-204ENST00000423636 CRELD1Q96HD1 420 aa11.02□□□□□ -0.64
PTPRN-204ENST00000423636 ARHGDIGQ99819 225 aa11.02□□□□□ -0.64
PTPRN-204ENST00000423636 GDF15Q99988 308 aa11.02□□□□□ -0.64
PTPRN-204ENST00000423636 LMAN2LQ9H0V9 348 aa11.02□□□□□ -0.64
PTPRN-204ENST00000423636 CBLCQ9ULV8 474 aa11.02□□□□□ -0.64
PTPRN-204ENST00000423636 MRPS7Q9Y2R9 242 aaKnown RBP11.02□□□□□ -0.64
PTPRN-204ENST00000423636 DCHS1Q96JQ0 3298 aa11.02□□□□□ -0.64
PTPRN-204ENST00000423636 SH3D21A4FU49 640 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 URADA6NGE7 173 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 PRODHO43272 600 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 FOXS1O43638 330 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 RAD1O60671 282 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 CBFA2T3O75081 653 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 SLC2A2P11168 524 aaPredicted RBP11.02□□□□□ -0.65
PTPRN-204ENST00000423636 WNT4P56705 351 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 OR12D2P58182 307 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 EEF1A1P68104 462 aaKnown RBP11.02□□□□□ -0.65
PTPRN-204ENST00000423636 ELOAQ14241 798 aaKnown RBP11.02□□□□□ -0.65
PTPRN-204ENST00000423636 TP53I3Q53FA7 332 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 PYDC2Q56P42 97 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 ESPNLQ6ZVH7 1005 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 C19orf47Q8N9M1 422 aaKnown RBP11.02□□□□□ -0.65
PTPRN-204ENST00000423636 OR2T33Q8NG76 320 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 OR52E2Q8NGJ4 325 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 GPBAR1Q8TDU6 330 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 ASB15Q8WXK1 588 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 POP5Q969H6 163 aaKnown RBP11.02□□□□□ -0.65
PTPRN-204ENST00000423636 DHRS1Q96LJ7 313 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 INIPQ9NRY2 104 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 PTGFRNQ9P2B2 879 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 TNFRSF10DQ9UBN6 386 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 ATXN7L1Q9ULK2 861 aaPredicted RBP11.02□□□□□ -0.65
PTPRN-204ENST00000423636 C19orf53Q9UNZ5 99 aaPredicted RBP11.02□□□□□ -0.65
PTPRN-204ENST00000423636 LIPT1Q9Y234 373 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 SPACA6W5XKT8 324 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 DUXAA6NLW8 204 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 SNPHO15079 494 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 NUDT14O95848 222 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 F13BP05160 661 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 IL9P15248 144 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 PAICSP22234 425 aaKnown RBP11.02□□□□□ -0.65
PTPRN-204ENST00000423636 RABIFP47224 123 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 MRPS21P82921 87 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms