RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 CLNS1AP54105 237 aaKnown RBP13.63□□□□□ -0.23
USB1-202ENST00000423271 RPS26P62854 115 aaKnown RBP13.63□□□□□ -0.23
USB1-202ENST00000423271 HBA1P69905 142 aa13.63□□□□□ -0.23
USB1-202ENST00000423271 ZNF117Q03924 483 aa13.63□□□□□ -0.23
USB1-202ENST00000423271 SGCBQ16585 318 aa13.63□□□□□ -0.23
USB1-202ENST00000423271 CTU2Q2VPK5 515 aaKnown RBP13.63□□□□□ -0.23
USB1-202ENST00000423271 PDCD4Q53EL6 469 aaKnown RBP13.63□□□□□ -0.23
USB1-202ENST00000423271 SPANXN4Q5MJ08 99 aa13.63□□□□□ -0.23
USB1-202ENST00000423271 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.63□□□□□ -0.23
USB1-202ENST00000423271 CGB2Q6NT52 195 aa13.63□□□□□ -0.23
USB1-202ENST00000423271 MISPQ8IVT2 679 aa13.63□□□□□ -0.23
USB1-202ENST00000423271 CLECL1Q8IZS7 167 aa13.63□□□□□ -0.23
USB1-202ENST00000423271 CLEC4FQ8N1N0 589 aa13.63□□□□□ -0.23
USB1-202ENST00000423271 OR5D16Q8NGK9 328 aa13.63□□□□□ -0.23
USB1-202ENST00000423271 OR10D3Q8NH80 312 aa13.63□□□□□ -0.23
USB1-202ENST00000423271 B4GALNT2Q8NHY0 566 aa13.63□□□□□ -0.23
USB1-202ENST00000423271 ADAMTS15Q8TE58 950 aa13.63□□□□□ -0.23
USB1-202ENST00000423271 ZBTB8AQ96BR9 441 aa13.63□□□□□ -0.23
USB1-202ENST00000423271 TESCQ96BS2 214 aa13.63□□□□□ -0.23
USB1-202ENST00000423271 SERHL2Q9H4I8 314 aa13.63□□□□□ -0.23
USB1-202ENST00000423271 PLEKHF2Q9H8W4 249 aa13.63□□□□□ -0.23
USB1-202ENST00000423271 NEUROD4Q9HD90 331 aa13.63□□□□□ -0.23
USB1-202ENST00000423271 FGFR1OP2Q9NVK5 253 aa13.63□□□□□ -0.23
USB1-202ENST00000423271 FAF1Q9UNN5 650 aaPredicted RBP13.63□□□□□ -0.23
USB1-202ENST00000423271 LINGO3P0C6S8 592 aa13.62□□□□□ -0.23
USB1-202ENST00000423271 ATP6V1C1P21283 382 aa13.62□□□□□ -0.23
USB1-202ENST00000423271 DNASE1P24855 282 aa13.62□□□□□ -0.23
USB1-202ENST00000423271 SHC1P29353 583 aa13.62□□□□□ -0.23
USB1-202ENST00000423271 CD79BP40259 229 aa13.62□□□□□ -0.23
USB1-202ENST00000423271 PHC1P78364 1004 aa13.62□□□□□ -0.23
USB1-202ENST00000423271 FOXF1Q12946 379 aa13.62□□□□□ -0.23
USB1-202ENST00000423271 GSTA3Q16772 222 aa13.62□□□□□ -0.23
USB1-202ENST00000423271 NDUFAF6Q330K2 333 aa13.62□□□□□ -0.23
USB1-202ENST00000423271 CBLN3Q6UW01 205 aa13.62□□□□□ -0.23
USB1-202ENST00000423271 NATD1Q8N6N6 113 aa13.62□□□□□ -0.23
USB1-202ENST00000423271 OR8J2Q8NGG1 315 aa13.62□□□□□ -0.23
USB1-202ENST00000423271 PHOSPHO1Q8TCT1 267 aa13.62□□□□□ -0.23
USB1-202ENST00000423271 OR7D2Q96RA2 312 aa13.62□□□□□ -0.23
USB1-202ENST00000423271 CLEC4AQ9UMR7 237 aa13.62□□□□□ -0.23
USB1-202ENST00000423271 A0A0G2JND7 137 aa13.61□□□□□ -0.23
USB1-202ENST00000423271 A0A0J9YW62 118 aa13.61□□□□□ -0.23
USB1-202ENST00000423271 NPIPB9F8W1W9 429 aa13.61□□□□□ -0.23
USB1-202ENST00000423271 TNFSF11O14788 317 aa13.61□□□□□ -0.23
USB1-202ENST00000423271 SIAH2O43255 324 aa13.61□□□□□ -0.23
USB1-202ENST00000423271 CXCL13O43927 109 aa13.61□□□□□ -0.23
USB1-202ENST00000423271 SCN2BO60939 215 aa13.61□□□□□ -0.23
USB1-202ENST00000423271 GOSR1O95249 250 aa13.61□□□□□ -0.23
USB1-202ENST00000423271 KRT16P08779 473 aa13.61□□□□□ -0.23
USB1-202ENST00000423271 CD8BP10966 210 aa13.61□□□□□ -0.23
USB1-202ENST00000423271 FCGR2AP12318 317 aa13.61□□□□□ -0.23
USB1-202ENST00000423271 S100A3P33764 101 aa13.61□□□□□ -0.23
USB1-202ENST00000423271 GYS2P54840 703 aa13.61□□□□□ -0.23
USB1-202ENST00000423271 RAC1P63000 192 aa13.61□□□□□ -0.23
USB1-202ENST00000423271 SF3A3Q12874 501 aaKnown RBP eCLIP13.61□□□□□ -0.23
USB1-202ENST00000423271 DPY19L1Q2PZI1 675 aa13.61□□□□□ -0.23
USB1-202ENST00000423271 FAM174BQ3ZCQ3 159 aa13.61□□□□□ -0.23
USB1-202ENST00000423271 KLHL26Q53HC5 615 aa13.61□□□□□ -0.23
USB1-202ENST00000423271 FAM214BQ7L5A3 538 aa13.61□□□□□ -0.23
USB1-202ENST00000423271 OLIG3Q7RTU3 272 aa13.61□□□□□ -0.23
USB1-202ENST00000423271 ANKRD46Q86W74 232 aa13.61□□□□□ -0.23
USB1-202ENST00000423271 ZNF610Q8N9Z0 462 aa13.61□□□□□ -0.23
USB1-202ENST00000423271 OR2V1Q8NHB1 315 aa13.61□□□□□ -0.23
USB1-202ENST00000423271 STON2Q8WXE9 905 aa13.61□□□□□ -0.23
USB1-202ENST00000423271 MOAP1Q96BY2 351 aa13.61□□□□□ -0.23
USB1-202ENST00000423271 WFIKKN1Q96NZ8 548 aa13.61□□□□□ -0.23
USB1-202ENST00000423271 ZBTB18Q99592 522 aa13.61□□□□□ -0.23
USB1-202ENST00000423271 PRRG4Q9BZD6 226 aa13.61□□□□□ -0.23
USB1-202ENST00000423271 HHATLQ9HCP6 504 aa13.61□□□□□ -0.23
USB1-202ENST00000423271 SDR39U1Q9NRG7 319 aaPredicted RBP13.61□□□□□ -0.23
USB1-202ENST00000423271 KLHL28Q9NXS3 571 aa13.61□□□□□ -0.23
USB1-202ENST00000423271 ZIM2Q9NZV7 527 aa13.61□□□□□ -0.23
USB1-202ENST00000423271 C6orf203Q9P0P8 240 aaPredicted RBP13.61□□□□□ -0.23
USB1-202ENST00000423271 PROCRQ9UNN8 238 aa13.61□□□□□ -0.23
USB1-202ENST00000423271 CARD8Q9Y2G2 431 aa13.61□□□□□ -0.23
USB1-202ENST00000423271 FLNAP21333 2647 aaKnown RBP13.6□□□□□ -0.23
USB1-202ENST00000423271 RNF103-CHMP3A0A140T963 221 aa13.6□□□□□ -0.23
USB1-202ENST00000423271 RNASET2O00584 256 aaKnown RBP13.6□□□□□ -0.23
USB1-202ENST00000423271 ADAMDEC1O15204 470 aa13.6□□□□□ -0.23
USB1-202ENST00000423271 SLC22A3O75751 556 aa13.6□□□□□ -0.23
USB1-202ENST00000423271 ATE1O95260 518 aa13.6□□□□□ -0.23
USB1-202ENST00000423271 RAF1P04049 648 aa13.6□□□□□ -0.23
USB1-202ENST00000423271 TROVE2P10155 538 aaKnown RBP eCLIP13.6□□□□□ -0.23
USB1-202ENST00000423271 POU2F1P14859 743 aa13.6□□□□□ -0.23
USB1-202ENST00000423271 UGT2B10P36537 528 aa13.6□□□□□ -0.23
USB1-202ENST00000423271 KCNJ5P48544 419 aa13.6□□□□□ -0.23
USB1-202ENST00000423271 ATP12AP54707 1039 aa13.6□□□□□ -0.23
USB1-202ENST00000423271 TOMM34Q15785 309 aaPredicted RBP13.6□□□□□ -0.23
USB1-202ENST00000423271 ANXA8L1Q5VT79 327 aa13.6□□□□□ -0.23
USB1-202ENST00000423271 ZNF550Q7Z398 422 aa13.6□□□□□ -0.23
USB1-202ENST00000423271 MTERF4Q7Z6M4 381 aaKnown RBP13.6□□□□□ -0.23
USB1-202ENST00000423271 HEATR5AQ86XA9 2040 aa13.6□□□□□ -0.23
USB1-202ENST00000423271 MIER2Q8N344 545 aa13.6□□□□□ -0.23
USB1-202ENST00000423271 ZNF614Q8N883 585 aa13.6□□□□□ -0.23
USB1-202ENST00000423271 ZNF527Q8NB42 609 aa13.6□□□□□ -0.23
USB1-202ENST00000423271 OR9I1Q8NGQ6 314 aa13.6□□□□□ -0.23
USB1-202ENST00000423271 ZNF524Q96C55 264 aa13.6□□□□□ -0.23
USB1-202ENST00000423271 ZNF317Q96PQ6 595 aaPredicted RBP13.6□□□□□ -0.23
USB1-202ENST00000423271 SIKE1Q9BRV8 207 aa13.6□□□□□ -0.23
USB1-202ENST00000423271 TMEM120AQ9BXJ8 343 aa13.6□□□□□ -0.23
USB1-202ENST00000423271 HOXD1Q9GZZ0 328 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms