RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 CHRNGP07510 517 aa14.4□□□□□ -0.1
COL18A1-205ENST00000423214 KRT16P08779 473 aa14.4□□□□□ -0.1
COL18A1-205ENST00000423214 LINGO3P0C6S8 592 aa14.4□□□□□ -0.1
COL18A1-205ENST00000423214 SUMO3P55854 103 aaPredicted RBP14.4□□□□□ -0.1
COL18A1-205ENST00000423214 RPS4XP62701 263 aaKnown RBP14.4□□□□□ -0.1
COL18A1-205ENST00000423214 ZNF844Q08AG5 666 aa14.4□□□□□ -0.1
COL18A1-205ENST00000423214 MLC1Q15049 377 aa14.4□□□□□ -0.1
COL18A1-205ENST00000423214 DCST2Q5T1A1 773 aa14.4□□□□□ -0.1
COL18A1-205ENST00000423214 CDC73Q6P1J9 531 aa14.4□□□□□ -0.1
COL18A1-205ENST00000423214 ZCCHC23Q6ZST2 131 aa14.4□□□□□ -0.1
COL18A1-205ENST00000423214 OR56A1Q8NGH5 318 aa14.4□□□□□ -0.1
COL18A1-205ENST00000423214 AGR3Q8TD06 166 aa14.4□□□□□ -0.1
COL18A1-205ENST00000423214 AKAP1Q92667 903 aaKnown RBP eCLIP14.4□□□□□ -0.1
COL18A1-205ENST00000423214 S100PBPQ96BU1 408 aa14.4□□□□□ -0.1
COL18A1-205ENST00000423214 KLHDC3Q9BQ90 382 aa14.4□□□□□ -0.1
COL18A1-205ENST00000423214 PIGUQ9H490 435 aa14.4□□□□□ -0.1
COL18A1-205ENST00000423214 EML4Q9HC35 981 aaKnown RBP14.4□□□□□ -0.1
COL18A1-205ENST00000423214 NGBQ9NPG2 151 aa14.4□□□□□ -0.1
COL18A1-205ENST00000423214 SIRT3Q9NTG7 399 aaPredicted RBP14.4□□□□□ -0.1
COL18A1-205ENST00000423214 ATAD3AQ9NVI7 634 aa14.4□□□□□ -0.1
COL18A1-205ENST00000423214 MKS1Q9NXB0 559 aa14.4□□□□□ -0.1
COL18A1-205ENST00000423214 KLHL13Q9P2N7 655 aa14.4□□□□□ -0.1
COL18A1-205ENST00000423214 FAF1Q9UNN5 650 aaPredicted RBP14.4□□□□□ -0.1
COL18A1-205ENST00000423214 RNF115Q9Y4L5 304 aa14.4□□□□□ -0.1
COL18A1-205ENST00000423214 GPC6Q9Y625 555 aaPredicted RBP14.4□□□□□ -0.1
COL18A1-205ENST00000423214 SONP18583 2426 aaKnown RBP14.39□□□□□ -0.11
COL18A1-205ENST00000423214 NPIPA5A0A0B4J1W7 369 aa14.39□□□□□ -0.11
COL18A1-205ENST00000423214 ESPNB1AK53 854 aa14.39□□□□□ -0.11
COL18A1-205ENST00000423214 TMEM233B4DJY2 109 aa14.39□□□□□ -0.11
COL18A1-205ENST00000423214 INAFM1C9JVW0 142 aa14.39□□□□□ -0.11
COL18A1-205ENST00000423214 NPIPA7E9PJI5 369 aa14.39□□□□□ -0.11
COL18A1-205ENST00000423214 GTPBP1O00178 669 aaKnown RBP14.39□□□□□ -0.11
COL18A1-205ENST00000423214 CLOCKO15516 846 aa14.39□□□□□ -0.11
COL18A1-205ENST00000423214 NPIPA8P0DM63 369 aa14.39□□□□□ -0.11
COL18A1-205ENST00000423214 PAX1P15863 534 aa14.39□□□□□ -0.11
COL18A1-205ENST00000423214 SHC1P29353 583 aa14.39□□□□□ -0.11
COL18A1-205ENST00000423214 SLC7A1P30825 629 aa14.39□□□□□ -0.11
COL18A1-205ENST00000423214 RNF144AP50876 292 aaPredicted RBP14.39□□□□□ -0.11
COL18A1-205ENST00000423214 P2RX1P51575 399 aa14.39□□□□□ -0.11
COL18A1-205ENST00000423214 SELENBP1Q13228 472 aa14.39□□□□□ -0.11
COL18A1-205ENST00000423214 CAPRIN1Q14444 709 aaKnown RBP14.39□□□□□ -0.11
COL18A1-205ENST00000423214 ATP6AP1LQ52LC2 224 aa14.39□□□□□ -0.11
COL18A1-205ENST00000423214 TFAP2EQ6VUC0 442 aa14.39□□□□□ -0.11
COL18A1-205ENST00000423214 FCRLAQ7L513 359 aa14.39□□□□□ -0.11
COL18A1-205ENST00000423214 ATP6V1C2Q8NEY4 427 aa14.39□□□□□ -0.11
COL18A1-205ENST00000423214 OR7A2PQ8NGA2 310 aa14.39□□□□□ -0.11
COL18A1-205ENST00000423214 FBXO27Q8NI29 283 aa14.39□□□□□ -0.11
COL18A1-205ENST00000423214 ADAMTS15Q8TE58 950 aa14.39□□□□□ -0.11
COL18A1-205ENST00000423214 ZFP90Q8TF47 636 aa14.39□□□□□ -0.11
COL18A1-205ENST00000423214 IGFBPL1Q8WX77 278 aa14.39□□□□□ -0.11
COL18A1-205ENST00000423214 FBXW5Q969U6 566 aa14.39□□□□□ -0.11
COL18A1-205ENST00000423214 PPP3R2Q96LZ3 170 aa14.39□□□□□ -0.11
COL18A1-205ENST00000423214 TMEM204Q9BSN7 226 aa14.39□□□□□ -0.11
COL18A1-205ENST00000423214 HDHD5Q9BXW7 423 aa14.39□□□□□ -0.11
COL18A1-205ENST00000423214 ACTRT3Q9BYD9 372 aa14.39□□□□□ -0.11
COL18A1-205ENST00000423214 SRXN1Q9BYN0 137 aa14.39□□□□□ -0.11
COL18A1-205ENST00000423214 HOXD1Q9GZZ0 328 aa14.39□□□□□ -0.11
COL18A1-205ENST00000423214 ESRP2Q9H6T0 727 aaKnown RBP14.39□□□□□ -0.11
COL18A1-205ENST00000423214 ZNF701Q9NV72 531 aaPredicted RBP14.39□□□□□ -0.11
COL18A1-205ENST00000423214 ATP6V1HQ9UI12 483 aa14.39□□□□□ -0.11
COL18A1-205ENST00000423214 LAMP3Q9UQV4 416 aa14.39□□□□□ -0.11
COL18A1-205ENST00000423214 CARD8Q9Y2G2 431 aa14.39□□□□□ -0.11
COL18A1-205ENST00000423214 DNHD1Q96M86 4753 aa14.38□□□□□ -0.11
COL18A1-205ENST00000423214 NPHS1O60500 1241 aa14.38□□□□□ -0.11
COL18A1-205ENST00000423214 ADH6P28332 368 aa14.38□□□□□ -0.11
COL18A1-205ENST00000423214 SOAT1P35610 550 aa14.38□□□□□ -0.11
COL18A1-205ENST00000423214 CCT3P49368 545 aaKnown RBP14.38□□□□□ -0.11
COL18A1-205ENST00000423214 CCR4P51679 360 aa14.38□□□□□ -0.11
COL18A1-205ENST00000423214 VEZF1Q14119 521 aa14.38□□□□□ -0.11
COL18A1-205ENST00000423214 ARL13AQ5H913 290 aaPredicted RBP14.38□□□□□ -0.11
COL18A1-205ENST00000423214 EXOSC6Q5RKV6 272 aaKnown RBP14.38□□□□□ -0.11
COL18A1-205ENST00000423214 TUSC5Q8IXB3 177 aa14.38□□□□□ -0.11
COL18A1-205ENST00000423214 ZNF619Q8N2I2 560 aa14.38□□□□□ -0.11
COL18A1-205ENST00000423214 RFWD2Q8NHY2 731 aa14.38□□□□□ -0.11
COL18A1-205ENST00000423214 RAB3IL1Q8TBN0 382 aa14.38□□□□□ -0.11
COL18A1-205ENST00000423214 OR5P2Q8WZ92 322 aa14.38□□□□□ -0.11
COL18A1-205ENST00000423214 KISS1RQ969F8 398 aaPredicted RBP14.38□□□□□ -0.11
COL18A1-205ENST00000423214 TRMT61AQ96FX7 289 aaKnown RBP14.38□□□□□ -0.11
COL18A1-205ENST00000423214 C1orf50Q9BV19 199 aa14.38□□□□□ -0.11
COL18A1-205ENST00000423214 GP6Q9HCN6 339 aa14.38□□□□□ -0.11
COL18A1-205ENST00000423214 GIMAP2Q9UG22 337 aa14.38□□□□□ -0.11
COL18A1-205ENST00000423214 TRAF6Q9Y4K3 522 aa14.38□□□□□ -0.11
COL18A1-205ENST00000423214 ZNF195O14628 629 aa14.37□□□□□ -0.11
COL18A1-205ENST00000423214 CFLARO15519 480 aa14.37□□□□□ -0.11
COL18A1-205ENST00000423214 PEX11AO75192 247 aa14.37□□□□□ -0.11
COL18A1-205ENST00000423214 GCM2O75603 506 aaPredicted RBP14.37□□□□□ -0.11
COL18A1-205ENST00000423214 PRKD3O94806 890 aa14.37□□□□□ -0.11
COL18A1-205ENST00000423214 CD3EP07766 207 aa14.37□□□□□ -0.11
COL18A1-205ENST00000423214 LAMP1P11279 417 aa14.37□□□□□ -0.11
COL18A1-205ENST00000423214 TSC22D1Q15714 1073 aa14.37□□□□□ -0.11
COL18A1-205ENST00000423214 LSM12Q3MHD2 195 aaKnown RBP14.37□□□□□ -0.11
COL18A1-205ENST00000423214 KRT71Q3SY84 523 aa14.37□□□□□ -0.11
COL18A1-205ENST00000423214 TMEM176BQ3YBM2 270 aaPredicted RBP14.37□□□□□ -0.11
COL18A1-205ENST00000423214 CBLN3Q6UW01 205 aa14.37□□□□□ -0.11
COL18A1-205ENST00000423214 NUFIP2Q7Z417 695 aaKnown RBP14.37□□□□□ -0.11
COL18A1-205ENST00000423214 PRIMA1Q86XR5 153 aa14.37□□□□□ -0.11
COL18A1-205ENST00000423214 GABRG1Q8N1C3 465 aa14.37□□□□□ -0.11
COL18A1-205ENST00000423214 SLC43A2Q8N370 569 aa14.37□□□□□ -0.11
COL18A1-205ENST00000423214 MREGQ8N565 214 aa14.37□□□□□ -0.11
COL18A1-205ENST00000423214 NATD1Q8N6N6 113 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms