RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 CLPTM1LQ96KA5 538 aa15.45■□□□□ 0.06
COL7A1-202ENST00000422991 THTPAQ9BU02 230 aa15.45■□□□□ 0.06
COL7A1-202ENST00000422991 ARMC7Q9H6L4 198 aa15.45■□□□□ 0.06
COL7A1-202ENST00000422991 OLAHQ9NV23 265 aa15.45■□□□□ 0.06
COL7A1-202ENST00000422991 ASF1BQ9NVP2 202 aa15.45■□□□□ 0.06
COL7A1-202ENST00000422991 RLIMQ9NVW2 624 aa15.45■□□□□ 0.06
COL7A1-202ENST00000422991 MAGEL2Q9UJ55 1249 aa15.45■□□□□ 0.06
COL7A1-202ENST00000422991 FREM3P0C091 2139 aa15.44■□□□□ 0.06
COL7A1-202ENST00000422991 SHANK1Q9Y566 2161 aa15.44■□□□□ 0.06
COL7A1-202ENST00000422991 ANKUB1A6NFN9 424 aa15.44■□□□□ 0.06
COL7A1-202ENST00000422991 CYP7B1O75881 506 aa15.44■□□□□ 0.06
COL7A1-202ENST00000422991 HPNP05981 417 aa15.44■□□□□ 0.06
COL7A1-202ENST00000422991 DPP4P27487 766 aa15.44■□□□□ 0.06
COL7A1-202ENST00000422991 SRD5A2P31213 254 aa15.44■□□□□ 0.06
COL7A1-202ENST00000422991 MSX2P35548 267 aaPredicted RBP15.44■□□□□ 0.06
COL7A1-202ENST00000422991 KCNJ5P48544 419 aa15.44■□□□□ 0.06
COL7A1-202ENST00000422991 CCR4P51679 360 aa15.44■□□□□ 0.06
COL7A1-202ENST00000422991 DSCR4P56555 118 aaPredicted RBP15.44■□□□□ 0.06
COL7A1-202ENST00000422991 GLIPR1L2Q4G1C9 344 aa15.44■□□□□ 0.06
COL7A1-202ENST00000422991 CMPK2Q5EBM0 449 aa15.44■□□□□ 0.06
COL7A1-202ENST00000422991 ZNF440Q8IYI8 595 aa15.44■□□□□ 0.06
COL7A1-202ENST00000422991 GPR32P1Q8NGA4 272 aa15.44■□□□□ 0.06
COL7A1-202ENST00000422991 OR5W2Q8NH69 310 aa15.44■□□□□ 0.06
COL7A1-202ENST00000422991 FAR1Q8WVX9 515 aa15.44■□□□□ 0.06
COL7A1-202ENST00000422991 ARSGQ96EG1 525 aa15.44■□□□□ 0.06
COL7A1-202ENST00000422991 SLX1AQ9BQ83 275 aa15.44■□□□□ 0.06
COL7A1-202ENST00000422991 CADM1Q9BY67 442 aaKnown RBP15.44■□□□□ 0.06
COL7A1-202ENST00000422991 OR2B2Q9GZK3 357 aa15.44■□□□□ 0.06
COL7A1-202ENST00000422991 TSPAN10Q9H1Z9 355 aaPredicted RBP15.44■□□□□ 0.06
COL7A1-202ENST00000422991 PTGES2Q9H7Z7 377 aa15.44■□□□□ 0.06
COL7A1-202ENST00000422991 DKKL1Q9UK85 242 aa15.44■□□□□ 0.06
COL7A1-202ENST00000422991 SNX13Q9Y5W8 968 aa15.44■□□□□ 0.06
COL7A1-202ENST00000422991 TMEM229AB2RXF0 380 aa15.43■□□□□ 0.06
COL7A1-202ENST00000422991 SYT5O00445 386 aa15.43■□□□□ 0.06
COL7A1-202ENST00000422991 ARPC2O15144 300 aa15.43■□□□□ 0.06
COL7A1-202ENST00000422991 GSC2O15499 205 aa15.43■□□□□ 0.06
COL7A1-202ENST00000422991 ADAM11O75078 769 aa15.43■□□□□ 0.06
COL7A1-202ENST00000422991 IFNA14P01570 189 aa15.43■□□□□ 0.06
COL7A1-202ENST00000422991 ME2P23368 584 aa15.43■□□□□ 0.06
COL7A1-202ENST00000422991 TDGF1P3P51864 188 aa15.43■□□□□ 0.06
COL7A1-202ENST00000422991 MLLT10P55197 1068 aa15.43■□□□□ 0.06
COL7A1-202ENST00000422991 ELOAQ14241 798 aaKnown RBP15.43■□□□□ 0.06
COL7A1-202ENST00000422991 DUSP7Q16829 419 aa15.43■□□□□ 0.06
COL7A1-202ENST00000422991 CYBRD1Q53TN4 286 aa15.43■□□□□ 0.06
COL7A1-202ENST00000422991 GLYATQ6IB77 296 aa15.43■□□□□ 0.06
COL7A1-202ENST00000422991 PGM2L1Q6PCE3 622 aa15.43■□□□□ 0.06
COL7A1-202ENST00000422991 ARSKQ6UWY0 536 aa15.43■□□□□ 0.06
COL7A1-202ENST00000422991 FAM83FQ8NEG4 500 aaPredicted RBP15.43■□□□□ 0.06
COL7A1-202ENST00000422991 CPT1CQ8TCG5 803 aa15.43■□□□□ 0.06
COL7A1-202ENST00000422991 GPR119Q8TDV5 335 aa15.43■□□□□ 0.06
COL7A1-202ENST00000422991 SLC26A7Q8TE54 656 aa15.43■□□□□ 0.06
COL7A1-202ENST00000422991 RASSF5Q8WWW0 418 aa15.43■□□□□ 0.06
COL7A1-202ENST00000422991 SLC35B4Q969S0 331 aa15.43■□□□□ 0.06
COL7A1-202ENST00000422991 FAM162AQ96A26 154 aa15.43■□□□□ 0.06
COL7A1-202ENST00000422991 PCDHAC1Q9H158 963 aa15.43■□□□□ 0.06
COL7A1-202ENST00000422991 AGPAT4Q9NRZ5 378 aa15.43■□□□□ 0.06
COL7A1-202ENST00000422991 MED17Q9NVC6 651 aa15.43■□□□□ 0.06
COL7A1-202ENST00000422991 MRPS18CQ9Y3D5 142 aaKnown RBP15.43■□□□□ 0.06
COL7A1-202ENST00000422991 LIPGQ9Y5X9 500 aa15.43■□□□□ 0.06
COL7A1-202ENST00000422991 TENM4Q6N022 2769 aa15.43■□□□□ 0.06
COL7A1-202ENST00000422991 ZNF407Q9C0G0 2248 aa15.43■□□□□ 0.06
COL7A1-202ENST00000422991 A0A087WZY1 265 aa15.42■□□□□ 0.06
COL7A1-202ENST00000422991 NPIPA5E9PKD4 350 aa15.42■□□□□ 0.06
COL7A1-202ENST00000422991 AP3D1O14617 1153 aa15.42■□□□□ 0.06
COL7A1-202ENST00000422991 FRS3O43559 492 aa15.42■□□□□ 0.06
COL7A1-202ENST00000422991 CDC40O60508 579 aaKnown RBP eCLIP15.42■□□□□ 0.06
COL7A1-202ENST00000422991 GMNNO75496 209 aa15.42■□□□□ 0.06
COL7A1-202ENST00000422991 TRAPPC6AO75865 159 aa15.42■□□□□ 0.06
COL7A1-202ENST00000422991 WISP2O76076 250 aa15.42■□□□□ 0.06
COL7A1-202ENST00000422991 NUDT14O95848 222 aa15.42■□□□□ 0.06
COL7A1-202ENST00000422991 LGI1O95970 557 aa15.42■□□□□ 0.06
COL7A1-202ENST00000422991 IGHG3P01860 377 aa15.42■□□□□ 0.06
COL7A1-202ENST00000422991 C8BP07358 591 aa15.42■□□□□ 0.06
COL7A1-202ENST00000422991 SLC6A8P48029 635 aa15.42■□□□□ 0.06
COL7A1-202ENST00000422991 EPS8Q12929 822 aa15.42■□□□□ 0.06
COL7A1-202ENST00000422991 CBFBQ13951 182 aa15.42■□□□□ 0.06
COL7A1-202ENST00000422991 SLC10A1Q14973 349 aa15.42■□□□□ 0.06
COL7A1-202ENST00000422991 TOMM20Q15388 145 aa15.42■□□□□ 0.06
COL7A1-202ENST00000422991 PLPPR5Q32ZL2 321 aa15.42■□□□□ 0.06
COL7A1-202ENST00000422991 ASRGL1Q7L266 308 aa15.42■□□□□ 0.06
COL7A1-202ENST00000422991 ULK2Q8IYT8 1036 aa15.42■□□□□ 0.06
COL7A1-202ENST00000422991 MCUR1Q96AQ8 359 aa15.42■□□□□ 0.06
COL7A1-202ENST00000422991 CCDC124Q96CT7 223 aaKnown RBP15.42■□□□□ 0.06
COL7A1-202ENST00000422991 RNF145Q96MT1 663 aa15.42■□□□□ 0.06
COL7A1-202ENST00000422991 GPR137Q96N19 417 aa15.42■□□□□ 0.06
COL7A1-202ENST00000422991 ARHGDIGQ99819 225 aa15.42■□□□□ 0.06
COL7A1-202ENST00000422991 DEFB127Q9H1M4 99 aa15.42■□□□□ 0.06
COL7A1-202ENST00000422991 SLC6A15Q9H2J7 730 aa15.42■□□□□ 0.06
COL7A1-202ENST00000422991 MUC13Q9H3R2 512 aa15.42■□□□□ 0.06
COL7A1-202ENST00000422991 GORASP2Q9H8Y8 452 aa15.42■□□□□ 0.06
COL7A1-202ENST00000422991 ACKR4Q9NPB9 350 aa15.42■□□□□ 0.06
COL7A1-202ENST00000422991 PLSCR2Q9NRY7 297 aa15.42■□□□□ 0.06
COL7A1-202ENST00000422991 TAS2R10Q9NYW0 307 aa15.42■□□□□ 0.06
COL7A1-202ENST00000422991 SLC13A4Q9UKG4 626 aa15.42■□□□□ 0.06
COL7A1-202ENST00000422991 BAG5Q9UL15 447 aa15.42■□□□□ 0.06
COL7A1-202ENST00000422991 NPIPA1Q9UND3 350 aa15.42■□□□□ 0.06
COL7A1-202ENST00000422991 C7orf72A4D263 438 aa15.41■□□□□ 0.06
COL7A1-202ENST00000422991 CFAP73A6NFT4 308 aa15.41■□□□□ 0.06
COL7A1-202ENST00000422991 FAM47E-STBD1D6RA91 191 aa15.41■□□□□ 0.06
COL7A1-202ENST00000422991 FAAHO00519 579 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms