RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 LIN52Q52LA3 116 aa14.26□□□□□ -0.13
BRAT1-202ENST00000421712 C1orf185Q5T7R7 199 aa14.26□□□□□ -0.13
BRAT1-202ENST00000421712 GKAP1Q5VSY0 366 aaPredicted RBP14.26□□□□□ -0.13
BRAT1-202ENST00000421712 AP1ARQ63HQ0 302 aa14.26□□□□□ -0.13
BRAT1-202ENST00000421712 NANOGP8Q6NSW7 305 aa14.26□□□□□ -0.13
BRAT1-202ENST00000421712 REEP3Q6NUK4 255 aa14.26□□□□□ -0.13
BRAT1-202ENST00000421712 VRK2Q86Y07 508 aa14.26□□□□□ -0.13
BRAT1-202ENST00000421712 ULK2Q8IYT8 1036 aa14.26□□□□□ -0.13
BRAT1-202ENST00000421712 UBQLNLQ8IYU4 475 aa14.26□□□□□ -0.13
BRAT1-202ENST00000421712 C10orf111Q8N326 155 aa14.26□□□□□ -0.13
BRAT1-202ENST00000421712 METTL25Q8N6Q8 603 aa14.26□□□□□ -0.13
BRAT1-202ENST00000421712 OR10Q1Q8NGQ4 319 aa14.26□□□□□ -0.13
BRAT1-202ENST00000421712 OR10A6Q8NH74 314 aa14.26□□□□□ -0.13
BRAT1-202ENST00000421712 ZNF563Q8TA94 476 aa14.26□□□□□ -0.13
BRAT1-202ENST00000421712 BBS10Q8TAM1 723 aa14.26□□□□□ -0.13
BRAT1-202ENST00000421712 GPR119Q8TDV5 335 aa14.26□□□□□ -0.13
BRAT1-202ENST00000421712 ZBTB8AQ96BR9 441 aa14.26□□□□□ -0.13
BRAT1-202ENST00000421712 CMTM5Q96DZ9 223 aa14.26□□□□□ -0.13
BRAT1-202ENST00000421712 CCDC120Q96HB5 630 aa14.26□□□□□ -0.13
BRAT1-202ENST00000421712 ECSITQ9BQ95 431 aa14.26□□□□□ -0.13
BRAT1-202ENST00000421712 ARMC7Q9H6L4 198 aa14.26□□□□□ -0.13
BRAT1-202ENST00000421712 NANOGQ9H9S0 305 aa14.26□□□□□ -0.13
BRAT1-202ENST00000421712 ICAM5Q9UMF0 924 aa14.26□□□□□ -0.13
BRAT1-202ENST00000421712 ZNF337Q9Y3M9 751 aa14.26□□□□□ -0.13
BRAT1-202ENST00000421712 GMEB1Q9Y692 573 aa14.26□□□□□ -0.13
BRAT1-202ENST00000421712 HELZ2Q9BYK8 2649 aaKnown RBP14.25□□□□□ -0.13
BRAT1-202ENST00000421712 SEC14L5O43304 696 aa14.25□□□□□ -0.13
BRAT1-202ENST00000421712 DCTN3O75935 186 aa14.25□□□□□ -0.13
BRAT1-202ENST00000421712 FAM107AO95990 144 aa14.25□□□□□ -0.13
BRAT1-202ENST00000421712 HOXD4P09016 255 aaPredicted RBP14.25□□□□□ -0.13
BRAT1-202ENST00000421712 PEPDP12955 493 aa14.25□□□□□ -0.13
BRAT1-202ENST00000421712 NID1P14543 1247 aa14.25□□□□□ -0.13
BRAT1-202ENST00000421712 PGCP20142 388 aa14.25□□□□□ -0.13
BRAT1-202ENST00000421712 AQP1P29972 269 aa14.25□□□□□ -0.13
BRAT1-202ENST00000421712 PTGER4P35408 488 aa14.25□□□□□ -0.13
BRAT1-202ENST00000421712 EIF1P41567 113 aaKnown RBP14.25□□□□□ -0.13
BRAT1-202ENST00000421712 SMSP52788 366 aa14.25□□□□□ -0.13
BRAT1-202ENST00000421712 SKP2Q13309 424 aa14.25□□□□□ -0.13
BRAT1-202ENST00000421712 QPRTQ15274 297 aa14.25□□□□□ -0.13
BRAT1-202ENST00000421712 ZNF311Q5JNZ3 666 aa14.25□□□□□ -0.13
BRAT1-202ENST00000421712 MRPL2Q5T653 305 aaKnown RBP14.25□□□□□ -0.13
BRAT1-202ENST00000421712 PRAMEF8Q5VWM4 474 aa14.25□□□□□ -0.13
BRAT1-202ENST00000421712 PRAMEF7Q5VXH5 474 aa14.25□□□□□ -0.13
BRAT1-202ENST00000421712 B3GNT6Q6ZMB0 384 aa14.25□□□□□ -0.13
BRAT1-202ENST00000421712 NCCRP1Q6ZVX7 275 aaPredicted RBP14.25□□□□□ -0.13
BRAT1-202ENST00000421712 KRT73Q86Y46 540 aa14.25□□□□□ -0.13
BRAT1-202ENST00000421712 TREML1Q86YW5 311 aa14.25□□□□□ -0.13
BRAT1-202ENST00000421712 CMIPQ8IY22 773 aa14.25□□□□□ -0.13
BRAT1-202ENST00000421712 MEIOBQ8N635 442 aa14.25□□□□□ -0.13
BRAT1-202ENST00000421712 C11orf65Q8NCR3 313 aa14.25□□□□□ -0.13
BRAT1-202ENST00000421712 CNOT9Q92600 299 aaKnown RBP14.25□□□□□ -0.13
BRAT1-202ENST00000421712 ARSGQ96EG1 525 aa14.25□□□□□ -0.13
BRAT1-202ENST00000421712 RNF145Q96MT1 663 aa14.25□□□□□ -0.13
BRAT1-202ENST00000421712 LRRC37BQ96QE4 947 aa14.25□□□□□ -0.13
BRAT1-202ENST00000421712 TRIB1Q96RU8 372 aa14.25□□□□□ -0.13
BRAT1-202ENST00000421712 KLHDC3Q9BQ90 382 aa14.25□□□□□ -0.13
BRAT1-202ENST00000421712 MYLK2Q9H1R3 596 aa14.25□□□□□ -0.13
BRAT1-202ENST00000421712 TMEM38AQ9H6F2 299 aa14.25□□□□□ -0.13
BRAT1-202ENST00000421712 EFCAB1Q9HAE3 211 aa14.25□□□□□ -0.13
BRAT1-202ENST00000421712 BCL2L10Q9HD36 194 aa14.25□□□□□ -0.13
BRAT1-202ENST00000421712 ANGPT4Q9Y264 503 aa14.25□□□□□ -0.13
BRAT1-202ENST00000421712 ZNF443Q9Y2A4 671 aaPredicted RBP14.25□□□□□ -0.13
BRAT1-202ENST00000421712 IFT52Q9Y366 437 aa14.25□□□□□ -0.13
BRAT1-202ENST00000421712 MYO18BQ8IUG5 2567 aa14.25□□□□□ -0.13
BRAT1-202ENST00000421712 CLEC18AA5D8T8 446 aa14.24□□□□□ -0.13
BRAT1-202ENST00000421712 LDLRP01130 860 aa14.24□□□□□ -0.13
BRAT1-202ENST00000421712 OPN1LWP04000 364 aa14.24□□□□□ -0.13
BRAT1-202ENST00000421712 LINGO3P0C6S8 592 aa14.24□□□□□ -0.13
BRAT1-202ENST00000421712 CPN1P15169 458 aa14.24□□□□□ -0.13
BRAT1-202ENST00000421712 ZNF17P17021 662 aa14.24□□□□□ -0.13
BRAT1-202ENST00000421712 RPS4Y1P22090 263 aaKnown RBP14.24□□□□□ -0.13
BRAT1-202ENST00000421712 ME2P23368 584 aa14.24□□□□□ -0.13
BRAT1-202ENST00000421712 SLC6A8P48029 635 aa14.24□□□□□ -0.13
BRAT1-202ENST00000421712 LHX2P50458 406 aa14.24□□□□□ -0.13
BRAT1-202ENST00000421712 FOXF1Q12946 379 aa14.24□□□□□ -0.13
BRAT1-202ENST00000421712 TOMM34Q15785 309 aaPredicted RBP14.24□□□□□ -0.13
BRAT1-202ENST00000421712 RABL3Q5HYI8 236 aa14.24□□□□□ -0.13
BRAT1-202ENST00000421712 CLEC18BQ6UXF7 455 aa14.24□□□□□ -0.13
BRAT1-202ENST00000421712 RPTNQ6XPR3 784 aa14.24□□□□□ -0.13
BRAT1-202ENST00000421712 GTPBP8Q8N3Z3 284 aaPredicted RBP14.24□□□□□ -0.13
BRAT1-202ENST00000421712 RPRMLQ8N4K4 120 aa14.24□□□□□ -0.13
BRAT1-202ENST00000421712 CLEC18CQ8NCF0 446 aa14.24□□□□□ -0.13
BRAT1-202ENST00000421712 HIPK4Q8NE63 616 aa14.24□□□□□ -0.13
BRAT1-202ENST00000421712 ATP6V1C2Q8NEY4 427 aa14.24□□□□□ -0.13
BRAT1-202ENST00000421712 OR8J3Q8NGG0 315 aa14.24□□□□□ -0.13
BRAT1-202ENST00000421712 FBXO27Q8NI29 283 aa14.24□□□□□ -0.13
BRAT1-202ENST00000421712 TMEM234Q8WY98 164 aa14.24□□□□□ -0.13
BRAT1-202ENST00000421712 RND1Q92730 232 aa14.24□□□□□ -0.13
BRAT1-202ENST00000421712 ZNF607Q96SK3 696 aa14.24□□□□□ -0.13
BRAT1-202ENST00000421712 NPAS1Q99742 590 aa14.24□□□□□ -0.13
BRAT1-202ENST00000421712 SPATA5L1Q9BVQ7 753 aa14.24□□□□□ -0.13
BRAT1-202ENST00000421712 PRDM14Q9GZV8 571 aa14.24□□□□□ -0.13
BRAT1-202ENST00000421712 KAT8Q9H7Z6 458 aaKnown RBP14.24□□□□□ -0.13
BRAT1-202ENST00000421712 RLIMQ9NVW2 624 aa14.24□□□□□ -0.13
BRAT1-202ENST00000421712 COQ3Q9NZJ6 369 aa14.24□□□□□ -0.13
BRAT1-202ENST00000421712 GPC6Q9Y625 555 aaPredicted RBP14.24□□□□□ -0.13
BRAT1-202ENST00000421712 AP4B1Q9Y6B7 739 aa14.24□□□□□ -0.13
BRAT1-202ENST00000421712 SETXQ7Z333 2677 aaKnown RBP14.24□□□□□ -0.13
BRAT1-202ENST00000421712 HEATR5AQ86XA9 2040 aa14.24□□□□□ -0.13
BRAT1-202ENST00000421712 DSPPQ9NZW4 1301 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms