RNA–Protein interactions for RNA: ENST00000421124.6

DDR1-233, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-233ENST00000421124 CACYBPQ9HB71 228 aaKnown RBP16.83■□□□□ 0.28
DDR1-233ENST00000421124 BCL2L10Q9HD36 194 aa16.83■□□□□ 0.28
DDR1-233ENST00000421124 CAMK2AQ9UQM7 478 aa16.83■□□□□ 0.28
DDR1-233ENST00000421124 NCOA6Q14686 2063 aaPredicted RBP16.82■□□□□ 0.28
DDR1-233ENST00000421124 C7orf72A4D263 438 aa16.82■□□□□ 0.28
DDR1-233ENST00000421124 LINC01387J3KSC0 135 aa16.82■□□□□ 0.28
DDR1-233ENST00000421124 PGM3O95394 542 aa16.82■□□□□ 0.28
DDR1-233ENST00000421124 FAM107AO95990 144 aa16.82■□□□□ 0.28
DDR1-233ENST00000421124 LDLRP01130 860 aa16.82■□□□□ 0.28
DDR1-233ENST00000421124 HOXD4P09016 255 aaPredicted RBP16.82■□□□□ 0.28
DDR1-233ENST00000421124 NID1P14543 1247 aa16.82■□□□□ 0.28
DDR1-233ENST00000421124 ZNF17P17021 662 aa16.82■□□□□ 0.28
DDR1-233ENST00000421124 ACVR2AP27037 513 aa16.82■□□□□ 0.28
DDR1-233ENST00000421124 CCR4P51679 360 aa16.82■□□□□ 0.28
DDR1-233ENST00000421124 CBFBQ13951 182 aa16.82■□□□□ 0.28
DDR1-233ENST00000421124 CYP51A1Q16850 503 aa16.82■□□□□ 0.28
DDR1-233ENST00000421124 TMEM44Q2T9K0 475 aa16.82■□□□□ 0.28
DDR1-233ENST00000421124 REEP3Q6NUK4 255 aa16.82■□□□□ 0.28
DDR1-233ENST00000421124 ULK2Q8IYT8 1036 aa16.82■□□□□ 0.28
DDR1-233ENST00000421124 OR8J3Q8NGG0 315 aa16.82■□□□□ 0.28
DDR1-233ENST00000421124 OR5M1Q8NGP8 315 aa16.82■□□□□ 0.28
DDR1-233ENST00000421124 OR52P1PQ8NH57 321 aa16.82■□□□□ 0.28
DDR1-233ENST00000421124 GPR119Q8TDV5 335 aa16.82■□□□□ 0.28
DDR1-233ENST00000421124 SSC4DQ8WTU2 575 aa16.82■□□□□ 0.28
DDR1-233ENST00000421124 ZBTB8AQ96BR9 441 aa16.82■□□□□ 0.28
DDR1-233ENST00000421124 ARSGQ96EG1 525 aa16.82■□□□□ 0.28
DDR1-233ENST00000421124 WDYHV1Q96HA8 205 aa16.82■□□□□ 0.28
DDR1-233ENST00000421124 DMRTA2Q96SC8 542 aa16.82■□□□□ 0.28
DDR1-233ENST00000421124 KAT8Q9H7Z6 458 aaKnown RBP16.82■□□□□ 0.28
DDR1-233ENST00000421124 ALKBH4Q9NXW9 302 aa16.82■□□□□ 0.28
DDR1-233ENST00000421124 CLDN24A6NM45 220 aa16.81■□□□□ 0.28
DDR1-233ENST00000421124 AHRRA9YTQ3 701 aa16.81■□□□□ 0.28
DDR1-233ENST00000421124 SHISA8B8ZZ34 492 aa16.81■□□□□ 0.28
DDR1-233ENST00000421124 DCTN3O75935 186 aa16.81■□□□□ 0.28
DDR1-233ENST00000421124 THBS1P07996 1170 aa16.81■□□□□ 0.28
DDR1-233ENST00000421124 LINGO3P0C6S8 592 aa16.81■□□□□ 0.28
DDR1-233ENST00000421124 CPN1P15169 458 aa16.81■□□□□ 0.28
DDR1-233ENST00000421124 SLC6A2P23975 617 aa16.81■□□□□ 0.28
DDR1-233ENST00000421124 PTGER4P35408 488 aa16.81■□□□□ 0.28
DDR1-233ENST00000421124 STARP49675 285 aa16.81■□□□□ 0.28
DDR1-233ENST00000421124 LHX2P50458 406 aa16.81■□□□□ 0.28
DDR1-233ENST00000421124 RBBP4Q09028 425 aa16.81■□□□□ 0.28
DDR1-233ENST00000421124 SCARB2Q14108 478 aa16.81■□□□□ 0.28
DDR1-233ENST00000421124 ADRM1Q16186 407 aa16.81■□□□□ 0.28
DDR1-233ENST00000421124 BCL2A1Q16548 175 aa16.81■□□□□ 0.28
DDR1-233ENST00000421124 LIN52Q52LA3 116 aa16.81■□□□□ 0.28
DDR1-233ENST00000421124 C1orf185Q5T7R7 199 aa16.81■□□□□ 0.28
DDR1-233ENST00000421124 GKAP1Q5VSY0 366 aaPredicted RBP16.81■□□□□ 0.28
DDR1-233ENST00000421124 NET1Q7Z628 596 aaPredicted RBP16.81■□□□□ 0.28
DDR1-233ENST00000421124 VRK2Q86Y07 508 aa16.81■□□□□ 0.28
DDR1-233ENST00000421124 GTPBP8Q8N3Z3 284 aaPredicted RBP16.81■□□□□ 0.28
DDR1-233ENST00000421124 C11orf65Q8NCR3 313 aa16.81■□□□□ 0.28
DDR1-233ENST00000421124 PHF10Q8WUB8 498 aaKnown RBP16.81■□□□□ 0.28
DDR1-233ENST00000421124 CMTM5Q96DZ9 223 aa16.81■□□□□ 0.28
DDR1-233ENST00000421124 CCDC120Q96HB5 630 aa16.81■□□□□ 0.28
DDR1-233ENST00000421124 EXOSC3Q9NQT5 275 aaKnown RBP16.81■□□□□ 0.28
DDR1-233ENST00000421124 ZNF232Q9UNY5 417 aa16.81■□□□□ 0.28
DDR1-233ENST00000421124 ZNF443Q9Y2A4 671 aaPredicted RBP16.81■□□□□ 0.28
DDR1-233ENST00000421124 IFT52Q9Y366 437 aa16.81■□□□□ 0.28
DDR1-233ENST00000421124 ZNF337Q9Y3M9 751 aa16.81■□□□□ 0.28
DDR1-233ENST00000421124 PCNX1Q96RV3 2341 aa16.81■□□□□ 0.28
DDR1-233ENST00000421124 LRRK2Q5S007 2527 aa16.8■□□□□ 0.28
DDR1-233ENST00000421124 H3BML4 177 aa16.8■□□□□ 0.28
DDR1-233ENST00000421124 AIM2O14862 343 aa16.8■□□□□ 0.28
DDR1-233ENST00000421124 DNAJA2O60884 412 aa16.8■□□□□ 0.28
DDR1-233ENST00000421124 BCAS1O75363 584 aaPredicted RBP16.8■□□□□ 0.28
DDR1-233ENST00000421124 PEPDP12955 493 aa16.8■□□□□ 0.28
DDR1-233ENST00000421124 ETS2P15036 469 aa16.8■□□□□ 0.28
DDR1-233ENST00000421124 PGCP20142 388 aa16.8■□□□□ 0.28
DDR1-233ENST00000421124 POU3F2P20265 443 aaPredicted RBP16.8■□□□□ 0.28
DDR1-233ENST00000421124 PRDX6P30041 224 aa16.8■□□□□ 0.28
DDR1-233ENST00000421124 PLAURQ03405 335 aa16.8■□□□□ 0.28
DDR1-233ENST00000421124 LARS2Q15031 903 aaKnown RBP16.8■□□□□ 0.28
DDR1-233ENST00000421124 SF3B4Q15427 424 aaKnown RBP eCLIP16.8■□□□□ 0.289e-6■■□□□ 14.4
DDR1-233ENST00000421124 RABL3Q5HYI8 236 aa16.8■□□□□ 0.28
DDR1-233ENST00000421124 MRPL2Q5T653 305 aaKnown RBP16.8■□□□□ 0.28
DDR1-233ENST00000421124 TMEM211Q6ICI0 200 aa16.8■□□□□ 0.28
DDR1-233ENST00000421124 SERPINA11Q86U17 422 aa16.8■□□□□ 0.28
DDR1-233ENST00000421124 PTOV1Q86YD1 416 aa16.8■□□□□ 0.28
DDR1-233ENST00000421124 RPRMLQ8N4K4 120 aa16.8■□□□□ 0.28
DDR1-233ENST00000421124 ANKS4BQ8N8V4 417 aa16.8■□□□□ 0.28
DDR1-233ENST00000421124 HIPK4Q8NE63 616 aa16.8■□□□□ 0.28
DDR1-233ENST00000421124 OR10A6Q8NH74 314 aa16.8■□□□□ 0.28
DDR1-233ENST00000421124 CNOT9Q92600 299 aaKnown RBP16.8■□□□□ 0.28
DDR1-233ENST00000421124 RNF145Q96MT1 663 aa16.8■□□□□ 0.28
DDR1-233ENST00000421124 LRRC37BQ96QE4 947 aa16.8■□□□□ 0.28
DDR1-233ENST00000421124 NPAS1Q99742 590 aa16.8■□□□□ 0.28
DDR1-233ENST00000421124 SPATA9Q9BWV2 254 aa16.8■□□□□ 0.28
DDR1-233ENST00000421124 EFCAB1Q9HAE3 211 aa16.8■□□□□ 0.28
DDR1-233ENST00000421124 DNAJB12Q9NXW2 375 aaKnown RBP16.8■□□□□ 0.28
DDR1-233ENST00000421124 ANGPT4Q9Y264 503 aa16.8■□□□□ 0.28
DDR1-233ENST00000421124 GPC6Q9Y625 555 aaPredicted RBP16.8■□□□□ 0.28
DDR1-233ENST00000421124 WIPF3A6NGB9 483 aa16.79■□□□□ 0.28
DDR1-233ENST00000421124 H0Y3Z8 333 aa16.79■□□□□ 0.28
DDR1-233ENST00000421124 ZG16O60844 167 aa16.79■□□□□ 0.28
DDR1-233ENST00000421124 PABPC4LP0CB38 370 aaKnown RBP16.79■□□□□ 0.28
DDR1-233ENST00000421124 ZNF708P17019 499 aa16.79■□□□□ 0.28
DDR1-233ENST00000421124 PRKCAP17252 672 aa16.79■□□□□ 0.28
DDR1-233ENST00000421124 EIF1P41567 113 aaKnown RBP16.79■□□□□ 0.28
DDR1-233ENST00000421124 SLC6A8P48029 635 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms