RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 PRAMEF25A6NGN4 478 aa6.83□□□□□ -1.32
BDNF-209ENST00000420794 MED26O95402 600 aa6.83□□□□□ -1.32
BDNF-209ENST00000420794 SOX14O95416 240 aa6.83□□□□□ -1.32
BDNF-209ENST00000420794 RAB40ALP0C0E4 278 aa6.83□□□□□ -1.32
BDNF-209ENST00000420794 STAT5AP42229 794 aa6.83□□□□□ -1.32
BDNF-209ENST00000420794 CYB561P49447 251 aa6.83□□□□□ -1.32
BDNF-209ENST00000420794 CRISP1P54107 249 aa6.83□□□□□ -1.32
BDNF-209ENST00000420794 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.83□□□□□ -1.32
BDNF-209ENST00000420794 CLEC12AQ5QGZ9 265 aa6.83□□□□□ -1.32
BDNF-209ENST00000420794 TCTN3Q6NUS6 607 aa6.83□□□□□ -1.32
BDNF-209ENST00000420794 SLC27A4Q6P1M0 643 aa6.83□□□□□ -1.32
BDNF-209ENST00000420794 PODNL1Q6PEZ8 512 aa6.83□□□□□ -1.32
BDNF-209ENST00000420794 C10orf111Q8N326 155 aa6.83□□□□□ -1.32
BDNF-209ENST00000420794 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.83□□□□□ -1.32
BDNF-209ENST00000420794 OR9Q2Q8NGE9 314 aa6.83□□□□□ -1.32
BDNF-209ENST00000420794 OR8K3Q8NH51 312 aa6.83□□□□□ -1.32
BDNF-209ENST00000420794 CTHRC1Q96CG8 243 aa6.83□□□□□ -1.32
BDNF-209ENST00000420794 SGCZQ96LD1 299 aa6.83□□□□□ -1.32
BDNF-209ENST00000420794 YTHDF1Q9BYJ9 559 aaKnown RBP6.83□□□□□ -1.32
BDNF-209ENST00000420794 PRRG4Q9BZD6 226 aa6.83□□□□□ -1.32
BDNF-209ENST00000420794 FAM117AQ9C073 453 aa6.83□□□□□ -1.32
BDNF-209ENST00000420794 NANSQ9NR45 359 aa6.83□□□□□ -1.32
BDNF-209ENST00000420794 NDUFA13Q9P0J0 144 aa6.83□□□□□ -1.32
BDNF-209ENST00000420794 U3KQA8 63 aa6.83□□□□□ -1.32
BDNF-209ENST00000420794 UNC119BA6NIH7 251 aa6.83□□□□□ -1.32
BDNF-209ENST00000420794 OR2J2O76002 312 aa6.83□□□□□ -1.32
BDNF-209ENST00000420794 OSMP13725 252 aa6.83□□□□□ -1.32
BDNF-209ENST00000420794 ABCD3P28288 659 aa6.83□□□□□ -1.32
BDNF-209ENST00000420794 NBL1P41271 181 aa6.83□□□□□ -1.32
BDNF-209ENST00000420794 CLDN6P56747 220 aa6.83□□□□□ -1.32
BDNF-209ENST00000420794 ARG2P78540 354 aa6.83□□□□□ -1.32
BDNF-209ENST00000420794 MFSD13AQ14CX5 517 aa6.83□□□□□ -1.32
BDNF-209ENST00000420794 RNF220Q5VTB9 566 aa6.83□□□□□ -1.32
BDNF-209ENST00000420794 HEPHL1Q6MZM0 1159 aa6.83□□□□□ -1.32
BDNF-209ENST00000420794 SMARCD3Q6STE5 483 aa6.83□□□□□ -1.32
BDNF-209ENST00000420794 HS3ST5Q8IZT8 346 aa6.83□□□□□ -1.32
BDNF-209ENST00000420794 CLIP4Q8N3C7 705 aa6.83□□□□□ -1.32
BDNF-209ENST00000420794 SNIP1Q8TAD8 396 aaKnown RBP6.83□□□□□ -1.32
BDNF-209ENST00000420794 M1APQ8TC57 530 aa6.83□□□□□ -1.32
BDNF-209ENST00000420794 ZNF597Q96LX8 424 aa6.83□□□□□ -1.32
BDNF-209ENST00000420794 SLC26A1Q9H2B4 701 aa6.83□□□□□ -1.32
BDNF-209ENST00000420794 MYOTQ9UBF9 498 aa6.83□□□□□ -1.32
BDNF-209ENST00000420794 A0A1W2PRQ8 180 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 BLOC1S5-TXNDC5H3BN57 136 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 RRP8O43159 456 aaKnown RBP6.82□□□□□ -1.32
BDNF-209ENST00000420794 HYAL3O43820 417 aaPredicted RBP6.82□□□□□ -1.32
BDNF-209ENST00000420794 OR2T1O43869 369 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 FMO6PO60774 539 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 ITGA10O75578 1167 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 DGCR6Q14129 220 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 SLC36A3Q495N2 470 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 KLHL12Q53G59 568 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 RAET1LQ5VY80 246 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 MARCH3Q86UD3 253 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 RORBQ92753 470 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 FAM118AQ9NWS6 357 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 HTR3EA5X5Y0 456 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 CDHR4A6H8M9 788 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 OR6C70A6NIJ9 312 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 HRKO00198 91 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 ICOSLGO75144 302 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 SERPINA7P05543 415 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 CD46P15529 392 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 TBXA2RP21731 343 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 MAGEA2P43356 314 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 GINS1Q14691 196 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 HMBOX1Q6NT76 420 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 ISLR2Q6UXK2 745 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 RBM45Q8IUH3 476 aaKnown RBP6.82□□□□□ -1.32
BDNF-209ENST00000420794 SIRT6Q8N6T7 355 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 PRSS33Q8NF86 280 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 OR2T33Q8NG76 320 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 OR51A7Q8NH64 312 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 FANK1Q8TC84 345 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 ZNF721Q8TF20 911 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 SNRNP27Q8WVK2 155 aaKnown RBP6.82□□□□□ -1.32
BDNF-209ENST00000420794 DDIT4LQ96D03 193 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 GIMAP5Q96F15 307 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 FAM46AQ96IP4 442 aaKnown RBP6.82□□□□□ -1.32
BDNF-209ENST00000420794 CCNL2Q96S94 520 aaPredicted RBP6.82□□□□□ -1.32
BDNF-209ENST00000420794 SPSB2Q99619 263 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 FBXL4Q9UKA2 621 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 BOKQ9UMX3 212 aaPredicted RBP6.82□□□□□ -1.32
BDNF-209ENST00000420794 ARID1BQ8NFD5 2236 aaPredicted RBP6.82□□□□□ -1.32
BDNF-209ENST00000420794 COL4A2P08572 1712 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 IGLV3-12A0A075B6K2 115 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 A0A1B0GWA3 101 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 ACOT7O00154 380 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 MYL12BO14950 172 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 TLX3O43711 291 aaPredicted RBP6.82□□□□□ -1.32
BDNF-209ENST00000420794 PRKNO60260 465 aaPredicted RBP6.82□□□□□ -1.32
BDNF-209ENST00000420794 HPP00738 406 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 ALPLP05186 524 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 PTNP21246 168 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 EVI2BP34910 448 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 ETV5P41161 510 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 GPR4P46093 362 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 P2RX1P51575 399 aa6.82□□□□□ -1.32
BDNF-209ENST00000420794 RPS18P62269 152 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms