RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 PRR22Q8IZ63 422 aa13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 RNF113BQ8IZP6 322 aaKnown RBP13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 CBR4Q8N4T8 237 aa13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 CLEC1AQ8NC01 280 aa13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 ICA1LQ8NDH6 482 aa13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 VANGL1Q8TAA9 524 aaPredicted RBP13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 ADAMTS16Q8TE57 1224 aa13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 GRHL3Q8TE85 626 aa13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 DNAJA4Q8WW22 397 aaPredicted RBP13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 MPP4Q96JB8 637 aa13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 SLC29A1Q99808 456 aa13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 ZNF426Q9BUY5 554 aa13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 FNDC11Q9BVV2 318 aa13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 TBL1XR1Q9BZK7 514 aa13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 RNF32Q9H0A6 362 aa13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 CDCP1Q9H5V8 836 aa13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 LIN28AQ9H9Z2 209 aaKnown RBP13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 SDHAF3Q9NRP4 125 aa13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 FLRT3Q9NZU0 649 aa13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 CNIH4Q9P003 139 aa13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 ICAM5Q9UMF0 924 aa13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 CHCHD2Q9Y6H1 151 aaPredicted RBP13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 PCSK5Q92824 1860 aa13.05□□□□□ -0.32
SHMT1P1-201ENST00000419974 A0A0B4J2E0 115 aa13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 A0A1B0GX12 115 aa13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 ZNF891A8MT65 544 aaPredicted RBP13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 SOCS2O14508 198 aa13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 ADAM11O75078 769 aa13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 BCAS1O75363 584 aaPredicted RBP13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 DIRAS1O95057 198 aa13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 LYPD3O95274 346 aa13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 ANGPTL1O95841 491 aa13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 CELA2AP08217 269 aa13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 ANXA8P13928 327 aa13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 UQCRBP14927 111 aa13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 ELAVL4P26378 380 aaKnown RBP13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 ITPKBP27987 946 aa13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 HTR2AP28223 471 aa13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 PTGDSP41222 190 aa13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 SOX3P41225 446 aa13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 RBM34P42696 430 aaKnown RBP13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 HLCSP50747 726 aa13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 FBXW4P57775 412 aa13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 SPIBQ01892 262 aa13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 OR1Q1Q15612 314 aa13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 ACER2Q5QJU3 275 aa13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 KDM4DQ6B0I6 523 aa13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 ULK3Q6PHR2 472 aa13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 CD300LDQ6UXZ3 194 aa13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 LINC00114Q6XXX2 140 aa13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 DEF8Q6ZN54 512 aa13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 C16orf47Q6ZP98 133 aaPredicted RBP13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 TMEM179BQ7Z7N9 219 aa13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 HMGN2P46Q86SG4 172 aa13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 APLFQ8IW19 511 aaPredicted RBP13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 OR5W2Q8NH69 310 aa13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 SLC7A13Q8TCU3 470 aa13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 THAP3Q8WTV1 239 aaPredicted RBP13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 ASB15Q8WXK1 588 aa13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 HS6ST2Q96MM7 605 aa13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 ALPK1Q96QP1 1244 aa13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 NODALQ96S42 347 aa13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 ANGPTL4Q9BY76 406 aa13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 PRORYQ9H606 182 aa13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 TMEM27Q9HBJ8 222 aa13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 TESMINQ9Y4I5 508 aa13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 SMG1Q96Q15 3661 aaKnown RBP13.04□□□□□ -0.32
SHMT1P1-201ENST00000419974 PTPRQQ9UMZ3 2332 aa13.03□□□□□ -0.32
SHMT1P1-201ENST00000419974 SH3PXD2BA1X283 911 aa13.03□□□□□ -0.32
SHMT1P1-201ENST00000419974 DLGAP1O14490 977 aa13.03□□□□□ -0.32
SHMT1P1-201ENST00000419974 CHP2O43745 196 aa13.03□□□□□ -0.32
SHMT1P1-201ENST00000419974 OR6B1O95007 311 aa13.03□□□□□ -0.32
SHMT1P1-201ENST00000419974 THY1P04216 161 aa13.03□□□□□ -0.32
SHMT1P1-201ENST00000419974 PRG2P13727 222 aa13.03□□□□□ -0.32
SHMT1P1-201ENST00000419974 CASP3P42574 277 aa13.03□□□□□ -0.32
SHMT1P1-201ENST00000419974 P2RX1P51575 399 aa13.03□□□□□ -0.32
SHMT1P1-201ENST00000419974 MAP2K6P52564 334 aa13.03□□□□□ -0.32
SHMT1P1-201ENST00000419974 IST1P53990 364 aa13.03□□□□□ -0.32
SHMT1P1-201ENST00000419974 CDH12P55289 794 aa13.03□□□□□ -0.32
SHMT1P1-201ENST00000419974 TAS2R41P59536 307 aa13.03□□□□□ -0.32
SHMT1P1-201ENST00000419974 TLE3Q04726 772 aa13.03□□□□□ -0.32
SHMT1P1-201ENST00000419974 NHSL2Q5HYW2 709 aa13.03□□□□□ -0.32
SHMT1P1-201ENST00000419974 DCST1Q5T197 706 aa13.03□□□□□ -0.32
SHMT1P1-201ENST00000419974 TBPL2Q6SJ96 375 aa13.03□□□□□ -0.32
SHMT1P1-201ENST00000419974 GDF7Q7Z4P5 450 aa13.03□□□□□ -0.32
SHMT1P1-201ENST00000419974 STK32CQ86UX6 486 aa13.03□□□□□ -0.32
SHMT1P1-201ENST00000419974 SPACA3Q8IXA5 215 aa13.03□□□□□ -0.32
SHMT1P1-201ENST00000419974 PARP8Q8N3A8 854 aa13.03□□□□□ -0.32
SHMT1P1-201ENST00000419974 AMER2Q8N7J2 671 aa13.03□□□□□ -0.32
SHMT1P1-201ENST00000419974 PHOSPHO1Q8TCT1 267 aa13.03□□□□□ -0.32
SHMT1P1-201ENST00000419974 BRIX1Q8TDN6 353 aaKnown RBP13.03□□□□□ -0.32
SHMT1P1-201ENST00000419974 GIPC3Q8TF64 312 aa13.03□□□□□ -0.32
SHMT1P1-201ENST00000419974 ACOT11Q8WXI4 607 aaPredicted RBP13.03□□□□□ -0.32
SHMT1P1-201ENST00000419974 SLC38A4Q969I6 547 aa13.03□□□□□ -0.32
SHMT1P1-201ENST00000419974 SLC41A3Q96GZ6 507 aa13.03□□□□□ -0.32
SHMT1P1-201ENST00000419974 THOC3Q96J01 351 aaKnown RBP13.03□□□□□ -0.32
SHMT1P1-201ENST00000419974 DGCR6LQ9BY27 220 aa13.03□□□□□ -0.32
SHMT1P1-201ENST00000419974 RTN4RQ9BZR6 473 aa13.03□□□□□ -0.32
SHMT1P1-201ENST00000419974 ADAM19Q9H013 955 aa13.03□□□□□ -0.32
SHMT1P1-201ENST00000419974 TMCC3Q9ULS5 477 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms