RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 RNF217Q8TC41 542 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 M1APQ8TC57 530 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 GRHL3Q8TE85 626 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 ACOT11Q8WXI4 607 aaPredicted RBP5.48□□□□□ -1.53
HMGB3-202ENST00000419110 ADAMTS14Q8WXS8 1223 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 NANOS1Q8WY41 292 aaKnown RBP5.48□□□□□ -1.53
HMGB3-202ENST00000419110 NACC2Q96BF6 587 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 TMCO6Q96DC7 493 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 SPACA9Q96E40 222 aaPredicted RBP5.48□□□□□ -1.53
HMGB3-202ENST00000419110 DTNBP1Q96EV8 351 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 MPP4Q96JB8 637 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 LMF1Q96S06 567 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 CCNL2Q96S94 520 aaPredicted RBP5.48□□□□□ -1.53
HMGB3-202ENST00000419110 ADOQ96SZ5 270 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 MBOAT4Q96T53 435 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 APOL4Q9BPW4 351 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 NDEL1Q9GZM8 345 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 METTL7AQ9H8H3 244 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 GPN2Q9H9Y4 310 aaPredicted RBP5.48□□□□□ -1.53
HMGB3-202ENST00000419110 SMURF2Q9HAU4 748 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 ZNF160Q9HCG1 818 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 MMP25Q9NPA2 562 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 ACER3Q9NUN7 267 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 FBXO34Q9NWN3 711 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 IMPAD1Q9NX62 359 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 KLRF1Q9NZS2 232 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 ABI3Q9P2A4 366 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 RHCGQ9UBD6 479 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 TMEFF2Q9UIK5 374 aaPredicted RBP5.48□□□□□ -1.53
HMGB3-202ENST00000419110 SCOCQ9UIL1 159 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 ZNF223Q9UK11 482 aaPredicted RBP5.48□□□□□ -1.53
HMGB3-202ENST00000419110 FBXL4Q9UKA2 621 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 BLOC1S6Q9UL45 172 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 A0A0B4J2E0 115 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 A0A1B0GWA3 101 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 A0A1B0GX12 115 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 A0A1W2PNU3 283 aaPredicted RBP5.47□□□□□ -1.53
HMGB3-202ENST00000419110 C7orf72A4D263 438 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 MAGEA13PA6NCF6 341 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 CLDN24A6NM45 220 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 ALG1L2C9J202 215 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.47□□□□□ -1.53
HMGB3-202ENST00000419110 WWP2O00308 870 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 SOCS6O14544 535 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 TP53I11O14683 189 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 ZNF264O43296 627 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 HCRTR2O43614 444 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 NDUFB5O43674 189 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 UGT2B11O75310 529 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 NUDT14O95848 222 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 RPSAP08865 295 aaKnown RBP5.47□□□□□ -1.53
HMGB3-202ENST00000419110 GKN3PP0CG01 181 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 LIPCP11150 499 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 ICAM2P13598 275 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 NAGAP17050 411 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 PGCP20142 388 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 FPR3P25089 353 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 HTR2AP28223 471 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 ADH7P40394 386 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 CASRP41180 1078 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 RBM34P42696 430 aaKnown RBP5.47□□□□□ -1.53
HMGB3-202ENST00000419110 GSSP48637 474 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 SSR4P51571 173 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 CDC42P60953 191 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 ESRRGP62508 458 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 NHLH1Q02575 133 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 PIN1Q13526 163 aaPredicted RBP5.47□□□□□ -1.53
HMGB3-202ENST00000419110 IL10RAQ13651 578 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 CBFBQ13951 182 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 OR1Q1Q15612 314 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 CD226Q15762 336 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 ZIK1Q3SY52 487 aaPredicted RBP5.47□□□□□ -1.53
HMGB3-202ENST00000419110 SLC36A3Q495N2 470 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 NHSL2Q5HYW2 709 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 ALG10BQ5I7T1 473 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 FNDC7Q5VTL7 733 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 AP1ARQ63HQ0 302 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 WBP2NLQ6ICG8 309 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 RPL13AP3Q6NVV1 102 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 PGBD2Q6P3X8 592 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 TBPL2Q6SJ96 375 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 OPN5Q6U736 354 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 IGF2-ASQ6U949 168 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 ASCL5Q7RTU5 278 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 TIPARPQ7Z3E1 657 aaKnown RBP5.47□□□□□ -1.53
HMGB3-202ENST00000419110 GDF7Q7Z4P5 450 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 TSEN54Q7Z6J9 526 aaKnown RBP5.47□□□□□ -1.53
HMGB3-202ENST00000419110 APLFQ8IW19 511 aaPredicted RBP5.47□□□□□ -1.53
HMGB3-202ENST00000419110 DEPDC4Q8N2C3 294 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 SLC15A4Q8N697 577 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 POGLUT1Q8NBL1 392 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 OR52L1Q8NGH7 329 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 ZNF563Q8TA94 476 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 FAM81AQ8TBF8 368 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 FANK1Q8TC84 345 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 SLC7A13Q8TCU3 470 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 THAP3Q8WTV1 239 aaPredicted RBP5.47□□□□□ -1.53
HMGB3-202ENST00000419110 DNAJA4Q8WW22 397 aaPredicted RBP5.47□□□□□ -1.53
HMGB3-202ENST00000419110 ASB15Q8WXK1 588 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 CNOT9Q92600 299 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms