RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 CA4P22748 312 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 MSNP26038 577 aaKnown RBP2.26□□□□□ -2.05
MCF2-204ENST00000414978 SEC61A1P61619 476 aaKnown RBP2.26□□□□□ -2.05
MCF2-204ENST00000414978 B2MP61769 119 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 RPS27AP62979 156 aaKnown RBP2.26□□□□□ -2.05
MCF2-204ENST00000414978 RPP38P78345 283 aaKnown RBP2.26□□□□□ -2.05
MCF2-204ENST00000414978 MRPL23Q16540 153 aaKnown RBP2.26□□□□□ -2.05
MCF2-204ENST00000414978 GGTA1PQ4G0N0 100 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 XKR6Q5GH73 641 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 GFRALQ6UXV0 394 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 HSDL2Q6YN16 418 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 Q6ZRG5 221 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 RFPL4BQ6ZWI9 263 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 CPEB2Q7Z5Q1 589 aaKnown RBP2.26□□□□□ -2.05
MCF2-204ENST00000414978 RBM23Q86U06 439 aaKnown RBP2.26□□□□□ -2.05
MCF2-204ENST00000414978 CACUL1Q86Y37 369 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 ATP6V0D2Q8N8Y2 350 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 POC1AQ8NBT0 407 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 CHPT1Q8WUD6 406 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 TMEM37Q8WXS4 190 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 FAM3CQ92520 227 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 DPF1Q92782 380 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 GPR137Q96N19 417 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 RPRD1AQ96P16 312 aaPredicted RBP2.26□□□□□ -2.05
MCF2-204ENST00000414978 FMO2Q99518 471 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 CBWD1Q9BRT8 395 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 SIKE1Q9BRV8 207 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 RAB34Q9BZG1 259 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 LAT2Q9GZY6 243 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 ATG10Q9H0Y0 220 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 BCAP29Q9UHQ4 241 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 NPIPA1Q9UND3 350 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 MRPL11Q9Y3B7 192 aaKnown RBP2.26□□□□□ -2.05
MCF2-204ENST00000414978 CEP250Q9BV73 2442 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 DCHS1Q96JQ0 3298 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 A0A087WWV3 80 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 IGKV6D-21A0A0A0MT36 114 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 IGLV5-39A0A0G2JS06 123 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 NPIPA2E9PIF3 369 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 M0QZ92 97 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 ZNF749O43361 778 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 LATO43561 262 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 OR1F1O43749 312 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 CA1P00915 261 aaPredicted RBP2.26□□□□□ -2.05
MCF2-204ENST00000414978 CST1P01037 141 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 SERPINE2P07093 398 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 FAM106CPP0CH98 169 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 GCFC2P16383 781 aaKnown RBP2.26□□□□□ -2.05
MCF2-204ENST00000414978 ACKR3P25106 362 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 FDFT1P37268 417 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 ATP1B3P54709 279 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 RAD23BP54727 409 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 SNAP25P60880 206 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 CBX1P83916 185 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 ZNF155Q12901 538 aaPredicted RBP2.26□□□□□ -2.05
MCF2-204ENST00000414978 DRP2Q13474 957 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 CDKN3Q16667 212 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 UBE2SQ16763 222 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 XKR4Q5GH76 650 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 CLLU1OSQ5K130 101 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 PIP5KL1Q5T9C9 394 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 C19orf48Q6RUI8 117 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 FAM228AQ86W67 206 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 NRACQ8N912 160 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 ANKFN1Q8N957 763 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 DDHD1Q8NEL9 900 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 CCDC26Q8TAB7 109 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 BPIFA3Q9BQP9 254 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 SLC25A33Q9BSK2 321 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 TRIM9Q9C026 710 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 XKR8Q9H6D3 395 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 PLEKHA3Q9HB20 300 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 FAM114A2Q9NRY5 505 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 RNF14Q9UBS8 474 aa2.26□□□□□ -2.05
MCF2-204ENST00000414978 C19orf25Q9UFG5 118 aaPredicted RBP2.26□□□□□ -2.05
MCF2-204ENST00000414978 ZNF638Q14966 1978 aaKnown RBP2.26□□□□□ -2.05
MCF2-204ENST00000414978 GOLGA8SH3BPF8 625 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 POLR3GO15318 223 aaPredicted RBP2.25□□□□□ -2.05
MCF2-204ENST00000414978 STX7O15400 261 aaKnown RBP2.25□□□□□ -2.05
MCF2-204ENST00000414978 RFPL2O75678 378 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 RBBP9O75884 186 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 CLDN1O95832 211 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 GLUD1P00367 558 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 RPLP0P05388 317 aaKnown RBP2.25□□□□□ -2.05
MCF2-204ENST00000414978 GLAP06280 429 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 TPM3P06753 285 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 MBL2P11226 248 aaPredicted RBP2.25□□□□□ -2.05
MCF2-204ENST00000414978 CD52P31358 61 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 SSR1P43307 286 aaKnown RBP2.25□□□□□ -2.05
MCF2-204ENST00000414978 ZP1P60852 638 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 LGALS3BPQ08380 585 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 IL17AQ16552 155 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 SLC5A12Q1EHB4 618 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 FAM76BQ5HYJ3 339 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 PDSS1Q5T2R2 415 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 PRAMEF5Q5TYX0 476 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 PRAMEF6Q5VXH4 476 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 CCDC80Q76M96 950 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 ZNF554Q86TJ5 538 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 C4orf32Q8N8J7 132 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms