RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	EDN3	P14138	238 aa		11.96	□□□□□ -0.49
SF1-206	ENST00000413725	UQCRB	P14927	111 aa		11.96	□□□□□ -0.49
SF1-206	ENST00000413725	HTR1E	P28566	365 aa		11.96	□□□□□ -0.49
SF1-206	ENST00000413725	SLC6A8	P48029	635 aa		11.96	□□□□□ -0.49
SF1-206	ENST00000413725	EEF1A1	P68104	462 aa	Known RBP	11.96	□□□□□ -0.49
SF1-206	ENST00000413725	CMPK2	Q5EBM0	449 aa		11.96	□□□□□ -0.49
SF1-206	ENST00000413725	DHRS4L2	Q6PKH6	230 aa		11.96	□□□□□ -0.49
SF1-206	ENST00000413725	CBLN3	Q6UW01	205 aa		11.96	□□□□□ -0.49
SF1-206	ENST00000413725	GRAMD2A	Q8IUY3	354 aa		11.96	□□□□□ -0.49
SF1-206	ENST00000413725	GHDC	Q8N2G8	530 aa		11.96	□□□□□ -0.49
SF1-206	ENST00000413725	RNF148	Q8N7C7	305 aa		11.96	□□□□□ -0.49
SF1-206	ENST00000413725	FAM83F	Q8NEG4	500 aa	Predicted RBP	11.96	□□□□□ -0.49
SF1-206	ENST00000413725	OR5W2	Q8NH69	310 aa		11.96	□□□□□ -0.49
SF1-206	ENST00000413725	FIG4	Q92562	907 aa		11.96	□□□□□ -0.49
SF1-206	ENST00000413725	PINK1	Q9BXM7	581 aa		11.96	□□□□□ -0.49
SF1-206	ENST00000413725	ACKR4	Q9NPB9	350 aa		11.96	□□□□□ -0.49
SF1-206	ENST00000413725	KLHL28	Q9NXS3	571 aa		11.96	□□□□□ -0.49
SF1-206	ENST00000413725	DNAJB12	Q9NXW2	375 aa	Known RBP	11.96	□□□□□ -0.49
SF1-206	ENST00000413725	TAS2R10	Q9NYW0	307 aa		11.96	□□□□□ -0.49
SF1-206	ENST00000413725	TAS2R1	Q9NYW7	299 aa		11.96	□□□□□ -0.49
SF1-206	ENST00000413725	ICAM5	Q9UMF0	924 aa		11.96	□□□□□ -0.49
SF1-206	ENST00000413725	HIVEP3	Q5T1R4	2406 aa		11.96	□□□□□ -0.5
SF1-206	ENST00000413725	PCNX1	Q96RV3	2341 aa		11.95	□□□□□ -0.5
SF1-206	ENST00000413725	TRGV5	A0A0B4J1U4	118 aa		11.95	□□□□□ -0.5
SF1-206	ENST00000413725		B4DXG7	233 aa		11.95	□□□□□ -0.5
SF1-206	ENST00000413725	CXCR6	O00574	342 aa		11.95	□□□□□ -0.5
SF1-206	ENST00000413725	OIP5	O43482	229 aa		11.95	□□□□□ -0.5
SF1-206	ENST00000413725	SUSD5	O60279	629 aa		11.95	□□□□□ -0.5
SF1-206	ENST00000413725	HCN1	O60741	890 aa		11.95	□□□□□ -0.5
SF1-206	ENST00000413725	MFN2	O95140	757 aa		11.95	□□□□□ -0.5
SF1-206	ENST00000413725	IGHG3	P01860	377 aa		11.95	□□□□□ -0.5
SF1-206	ENST00000413725	OPN1SW	P03999	348 aa		11.95	□□□□□ -0.5
SF1-206	ENST00000413725	CELA3A	P09093	270 aa		11.95	□□□□□ -0.5
SF1-206	ENST00000413725	HK1	P19367	917 aa		11.95	□□□□□ -0.5
SF1-206	ENST00000413725	TCN1	P20061	433 aa	Predicted RBP	11.95	□□□□□ -0.5
SF1-206	ENST00000413725	PGC	P20142	388 aa		11.95	□□□□□ -0.5
SF1-206	ENST00000413725	KDELR2	P33947	212 aa		11.95	□□□□□ -0.5
SF1-206	ENST00000413725	TDGF1P3	P51864	188 aa		11.95	□□□□□ -0.5
SF1-206	ENST00000413725	TLE1	Q04724	770 aa		11.95	□□□□□ -0.5
SF1-206	ENST00000413725	DMTN	Q08495	405 aa		11.95	□□□□□ -0.5
SF1-206	ENST00000413725	LRRC23	Q53EV4	343 aa	Predicted RBP	11.95	□□□□□ -0.5
SF1-206	ENST00000413725	ARHGAP11A	Q6P4F7	1023 aa		11.95	□□□□□ -0.5
SF1-206	ENST00000413725	CCDC121	Q6ZUS5	278 aa		11.95	□□□□□ -0.5
SF1-206	ENST00000413725	TRIL	Q7L0X0	811 aa		11.95	□□□□□ -0.5
SF1-206	ENST00000413725	ZNF550	Q7Z398	422 aa		11.95	□□□□□ -0.5
SF1-206	ENST00000413725	YRDC	Q86U90	279 aa	Known RBP	11.95	□□□□□ -0.5
SF1-206	ENST00000413725	SMYD1	Q8NB12	490 aa		11.95	□□□□□ -0.5
SF1-206	ENST00000413725	CNOT9	Q92600	299 aa	Known RBP	11.95	□□□□□ -0.5
SF1-206	ENST00000413725	SLC35B4	Q969S0	331 aa		11.95	□□□□□ -0.5
SF1-206	ENST00000413725	TAMM41	Q96BW9	452 aa		11.95	□□□□□ -0.5
SF1-206	ENST00000413725	ARSG	Q96EG1	525 aa		11.95	□□□□□ -0.5
SF1-206	ENST00000413725	BTBD10	Q9BSF8	475 aa		11.95	□□□□□ -0.5
SF1-206	ENST00000413725	SLC6A15	Q9H2J7	730 aa		11.95	□□□□□ -0.5
SF1-206	ENST00000413725	EVA1A	Q9H8M9	152 aa		11.95	□□□□□ -0.5
SF1-206	ENST00000413725	PLSCR2	Q9NRY7	297 aa		11.95	□□□□□ -0.5
SF1-206	ENST00000413725	MED17	Q9NVC6	651 aa		11.95	□□□□□ -0.5
SF1-206	ENST00000413725	RLIM	Q9NVW2	624 aa		11.95	□□□□□ -0.5
SF1-206	ENST00000413725	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	11.95	□□□□□ -0.5
SF1-206	ENST00000413725	GMPR2	Q9P2T1	348 aa	Known RBP	11.95	□□□□□ -0.5
SF1-206	ENST00000413725	CD300A	Q9UGN4	299 aa		11.95	□□□□□ -0.5
SF1-206	ENST00000413725	MAGEL2	Q9UJ55	1249 aa		11.95	□□□□□ -0.5
SF1-206	ENST00000413725	PACSIN3	Q9UKS6	424 aa		11.95	□□□□□ -0.5
SF1-206	ENST00000413725	VDAC3	Q9Y277	283 aa		11.95	□□□□□ -0.5
SF1-206	ENST00000413725	SMG1	Q96Q15	3661 aa	Known RBP	11.95	□□□□□ -0.5
SF1-206	ENST00000413725	ZNF462	Q96JM2	2506 aa		11.94	□□□□□ -0.5
SF1-206	ENST00000413725	CFAP73	A6NFT4	308 aa		11.94	□□□□□ -0.5
SF1-206	ENST00000413725	SYT5	O00445	386 aa		11.94	□□□□□ -0.5
SF1-206	ENST00000413725	GCM2	O75603	506 aa	Predicted RBP	11.94	□□□□□ -0.5
SF1-206	ENST00000413725	LINGO3	P0C6S8	592 aa		11.94	□□□□□ -0.5
SF1-206	ENST00000413725	GGT1	P19440	569 aa		11.94	□□□□□ -0.5
SF1-206	ENST00000413725	TCEA1	P23193	301 aa	Known RBP	11.94	□□□□□ -0.5
SF1-206	ENST00000413725	EIF1	P41567	113 aa	Known RBP	11.94	□□□□□ -0.5
SF1-206	ENST00000413725	RBPJ	Q06330	500 aa		11.94	□□□□□ -0.5
SF1-206	ENST00000413725	BNIP2	Q12982	314 aa		11.94	□□□□□ -0.5
SF1-206	ENST00000413725	ELOA	Q14241	798 aa	Known RBP	11.94	□□□□□ -0.5
SF1-206	ENST00000413725	PLPPR5	Q32ZL2	321 aa		11.94	□□□□□ -0.5
SF1-206	ENST00000413725	GLYR1	Q49A26	553 aa	Predicted RBP	11.94	□□□□□ -0.5
SF1-206	ENST00000413725	WIPI1	Q5MNZ9	446 aa	Predicted RBP	11.94	□□□□□ -0.5
SF1-206	ENST00000413725	RAET1L	Q5VY80	246 aa		11.94	□□□□□ -0.5
SF1-206	ENST00000413725	AAGAB	Q6PD74	315 aa		11.94	□□□□□ -0.5
SF1-206	ENST00000413725	ARSK	Q6UWY0	536 aa		11.94	□□□□□ -0.5
SF1-206	ENST00000413725	GFRAL	Q6UXV0	394 aa		11.94	□□□□□ -0.5
SF1-206	ENST00000413725	CLIP4	Q8N3C7	705 aa		11.94	□□□□□ -0.5
SF1-206	ENST00000413725	ST6GALNAC3	Q8NDV1	305 aa		11.94	□□□□□ -0.5
SF1-206	ENST00000413725	ZNF563	Q8TA94	476 aa		11.94	□□□□□ -0.5
SF1-206	ENST00000413725	NEIL3	Q8TAT5	605 aa		11.94	□□□□□ -0.5
SF1-206	ENST00000413725	GPR119	Q8TDV5	335 aa		11.94	□□□□□ -0.5
SF1-206	ENST00000413725	TMEM234	Q8WY98	164 aa		11.94	□□□□□ -0.5
SF1-206	ENST00000413725	LZIC	Q8WZA0	190 aa		11.94	□□□□□ -0.5
SF1-206	ENST00000413725	PROX1	Q92786	737 aa		11.94	□□□□□ -0.5
SF1-206	ENST00000413725	FAM162A	Q96A26	154 aa		11.94	□□□□□ -0.5
SF1-206	ENST00000413725	ZBTB8A	Q96BR9	441 aa		11.94	□□□□□ -0.5
SF1-206	ENST00000413725	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	11.94	□□□□□ -0.5
SF1-206	ENST00000413725	RNF145	Q96MT1	663 aa		11.94	□□□□□ -0.5
SF1-206	ENST00000413725	DOCK7	Q96N67	2140 aa		11.94	□□□□□ -0.5
SF1-206	ENST00000413725	SFXN2	Q96NB2	322 aa		11.94	□□□□□ -0.5
SF1-206	ENST00000413725	PIGQ	Q9BRB3	760 aa		11.94	□□□□□ -0.5
SF1-206	ENST00000413725	THTPA	Q9BU02	230 aa		11.94	□□□□□ -0.5
SF1-206	ENST00000413725	ADPRHL2	Q9NX46	363 aa		11.94	□□□□□ -0.5
SF1-206	ENST00000413725	EGFL7	Q9UHF1	273 aa		11.94	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms