RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 PGRP06401 933 aa23.62■■□□□ 1.37
VEGFA-207ENST00000413642 CHI3L1P36222 383 aaPredicted RBP23.62■■□□□ 1.37
VEGFA-207ENST00000413642 ZNF141Q15928 474 aa23.62■■□□□ 1.37
VEGFA-207ENST00000413642 MAPK14Q16539 360 aa23.62■■□□□ 1.37
VEGFA-207ENST00000413642 PANX1Q96RD7 426 aa23.62■■□□□ 1.37
VEGFA-207ENST00000413642 NMUR2Q9GZQ4 415 aa23.62■■□□□ 1.37
VEGFA-207ENST00000413642 OPN3Q9H1Y3 402 aaPredicted RBP23.62■■□□□ 1.37
VEGFA-207ENST00000413642 EXD2Q9NVH0 621 aa23.62■■□□□ 1.37
VEGFA-207ENST00000413642 DNAJB12Q9NXW2 375 aaKnown RBP23.62■■□□□ 1.37
VEGFA-207ENST00000413642 NUP214P35658 2090 aaPredicted RBP23.61■■□□□ 1.37
VEGFA-207ENST00000413642 AK1P00568 194 aa23.61■■□□□ 1.37
VEGFA-207ENST00000413642 CRHP06850 196 aa23.61■■□□□ 1.37
VEGFA-207ENST00000413642 CPOXP36551 454 aa23.61■■□□□ 1.37
VEGFA-207ENST00000413642 PEX19P40855 299 aa23.61■■□□□ 1.37
VEGFA-207ENST00000413642 TYW3Q6IPR3 259 aaKnown RBP23.61■■□□□ 1.37
VEGFA-207ENST00000413642 RNF130Q86XS8 419 aa23.61■■□□□ 1.37
VEGFA-207ENST00000413642 LILRA2Q8N149 483 aa23.61■■□□□ 1.37
VEGFA-207ENST00000413642 TMCO5AQ8N6Q1 288 aa23.61■■□□□ 1.37
VEGFA-207ENST00000413642 OR2V1Q8NHB1 315 aa23.61■■□□□ 1.37
VEGFA-207ENST00000413642 ZG16BQ96DA0 208 aa23.61■■□□□ 1.37
VEGFA-207ENST00000413642 ZBTB18Q99592 522 aa23.61■■□□□ 1.37
VEGFA-207ENST00000413642 CLEC4AQ9UMR7 237 aa23.61■■□□□ 1.37
VEGFA-207ENST00000413642 USH1CQ9Y6N9 552 aa23.61■■□□□ 1.37
VEGFA-207ENST00000413642 ADAMDEC1O15204 470 aa23.6■■□□□ 1.37
VEGFA-207ENST00000413642 ZNF264O43296 627 aa23.6■■□□□ 1.37
VEGFA-207ENST00000413642 DIAPH2O60879 1101 aa23.6■■□□□ 1.37
VEGFA-207ENST00000413642 BCAS1O75363 584 aaPredicted RBP23.6■■□□□ 1.37
VEGFA-207ENST00000413642 CYP7B1O75881 506 aa23.6■■□□□ 1.37
VEGFA-207ENST00000413642 UBL4AP11441 157 aa23.6■■□□□ 1.37
VEGFA-207ENST00000413642 SFTPDP35247 375 aa23.6■■□□□ 1.37
VEGFA-207ENST00000413642 CCR4P51679 360 aa23.6■■□□□ 1.37
VEGFA-207ENST00000413642 EEF1A1P68104 462 aaKnown RBP23.6■■□□□ 1.37
VEGFA-207ENST00000413642 PDCD4Q53EL6 469 aaKnown RBP23.6■■□□□ 1.37
VEGFA-207ENST00000413642 EEF1A1P5Q5VTE0 462 aa23.6■■□□□ 1.37
VEGFA-207ENST00000413642 ZNF474Q6S9Z5 364 aaPredicted RBP23.6■■□□□ 1.37
VEGFA-207ENST00000413642 ZNF621Q6ZSS3 439 aa23.6■■□□□ 1.37
VEGFA-207ENST00000413642 ROPN1LQ96C74 230 aa23.6■■□□□ 1.37
VEGFA-207ENST00000413642 POLDIP3Q9BY77 421 aaKnown RBP23.6■■□□□ 1.37
VEGFA-207ENST00000413642 PRRG4Q9BZD6 226 aa23.6■■□□□ 1.37
VEGFA-207ENST00000413642 SLCO1B3Q9NPD5 702 aa23.6■■□□□ 1.37
VEGFA-207ENST00000413642 SLC6A13Q9NSD5 602 aa23.6■■□□□ 1.37
VEGFA-207ENST00000413642 STOML1Q9UBI4 398 aa23.6■■□□□ 1.37
VEGFA-207ENST00000413642 FAM221AA4D161 298 aa23.59■■□□□ 1.37
VEGFA-207ENST00000413642 A6NNC1 897 aa23.59■■□□□ 1.37
VEGFA-207ENST00000413642 HMGN4O00479 90 aa23.59■■□□□ 1.37
VEGFA-207ENST00000413642 MSTNO14793 375 aa23.59■■□□□ 1.37
VEGFA-207ENST00000413642 SLC22A3O75751 556 aa23.59■■□□□ 1.37
VEGFA-207ENST00000413642 CGAP01215 116 aa23.59■■□□□ 1.37
VEGFA-207ENST00000413642 IDO1P14902 403 aa23.59■■□□□ 1.37
VEGFA-207ENST00000413642 PRKCAP17252 672 aa23.59■■□□□ 1.37
VEGFA-207ENST00000413642 KHKP50053 298 aa23.59■■□□□ 1.37
VEGFA-207ENST00000413642 SUMO3P55854 103 aaPredicted RBP23.59■■□□□ 1.37
VEGFA-207ENST00000413642 SORDQ00796 357 aa23.59■■□□□ 1.37
VEGFA-207ENST00000413642 FAM27E3Q08E93 113 aa23.59■■□□□ 1.37
VEGFA-207ENST00000413642 GUSBP1Q15486 140 aa23.59■■□□□ 1.37
VEGFA-207ENST00000413642 ATAD3BQ5T9A4 648 aa23.59■■□□□ 1.37
VEGFA-207ENST00000413642 HBMQ6B0K9 141 aa23.59■■□□□ 1.37
VEGFA-207ENST00000413642 ATP6V1C2Q8NEY4 427 aa23.59■■□□□ 1.37
VEGFA-207ENST00000413642 OR9I1Q8NGQ6 314 aa23.59■■□□□ 1.37
VEGFA-207ENST00000413642 PNPT1Q8TCS8 783 aaKnown RBP23.59■■□□□ 1.37
VEGFA-207ENST00000413642 KLHL15Q96M94 604 aa23.59■■□□□ 1.37
VEGFA-207ENST00000413642 THUMPD3Q9BV44 507 aaKnown RBP23.59■■□□□ 1.37
VEGFA-207ENST00000413642 LIME1Q9H400 295 aa23.59■■□□□ 1.37
VEGFA-207ENST00000413642 RASSF1Q9NS23 344 aa23.59■■□□□ 1.37
VEGFA-207ENST00000413642 WDR45Q9Y484 360 aa23.59■■□□□ 1.37
VEGFA-207ENST00000413642 KIAA0513O60268 411 aa23.58■■□□□ 1.37
VEGFA-207ENST00000413642 EIF4E2O60573 245 aaKnown RBP23.58■■□□□ 1.37
VEGFA-207ENST00000413642 EPXP11678 715 aa23.58■■□□□ 1.37
VEGFA-207ENST00000413642 EIF1P41567 113 aaKnown RBP23.58■■□□□ 1.37
VEGFA-207ENST00000413642 SKP2Q13309 424 aa23.58■■□□□ 1.37
VEGFA-207ENST00000413642 DAZAP2Q15038 168 aaPredicted RBP23.58■■□□□ 1.37
VEGFA-207ENST00000413642 QPRTQ15274 297 aa23.58■■□□□ 1.37
VEGFA-207ENST00000413642 COX20Q5RI15 118 aa23.58■■□□□ 1.37
VEGFA-207ENST00000413642 EPGNQ6UW88 154 aa23.58■■□□□ 1.37
VEGFA-207ENST00000413642 DNAJC14Q6Y2X3 702 aaPredicted RBP23.58■■□□□ 1.37
VEGFA-207ENST00000413642 FRRS1Q6ZNA5 592 aa23.58■■□□□ 1.37
VEGFA-207ENST00000413642 ESPNLQ6ZVH7 1005 aa23.58■■□□□ 1.37
VEGFA-207ENST00000413642 ANKFN1Q8N957 763 aa23.58■■□□□ 1.37
VEGFA-207ENST00000413642 ZNF610Q8N9Z0 462 aa23.58■■□□□ 1.37
VEGFA-207ENST00000413642 OR5W2Q8NH69 310 aa23.58■■□□□ 1.37
VEGFA-207ENST00000413642 OSTF1Q92882 214 aa23.58■■□□□ 1.37
VEGFA-207ENST00000413642 QRSL1Q9H0R6 528 aaKnown RBP23.58■■□□□ 1.37
VEGFA-207ENST00000413642 UBDO15205 165 aa23.57■■□□□ 1.36
VEGFA-207ENST00000413642 NTN1O95631 604 aa23.57■■□□□ 1.36
VEGFA-207ENST00000413642 AGR2O95994 175 aa23.57■■□□□ 1.36
VEGFA-207ENST00000413642 CSTAP01040 98 aa23.57■■□□□ 1.36
VEGFA-207ENST00000413642 UBTFL6P0CB48 400 aaPredicted RBP23.57■■□□□ 1.36
VEGFA-207ENST00000413642 ME2P23368 584 aa23.57■■□□□ 1.36
VEGFA-207ENST00000413642 CHRNEQ04844 493 aa23.57■■□□□ 1.36
VEGFA-207ENST00000413642 SYPL1Q16563 259 aa23.57■■□□□ 1.36
VEGFA-207ENST00000413642 GPAT3Q53EU6 434 aa23.57■■□□□ 1.36
VEGFA-207ENST00000413642 LSRQ86X29 649 aaPredicted RBP23.57■■□□□ 1.36
VEGFA-207ENST00000413642 GLB1L3Q8NCI6 653 aaPredicted RBP23.57■■□□□ 1.36
VEGFA-207ENST00000413642 TOR1AIP2Q8NFQ8 470 aa23.57■■□□□ 1.36
VEGFA-207ENST00000413642 ROBO4Q8WZ75 1007 aa23.57■■□□□ 1.36
VEGFA-207ENST00000413642 C7orf26Q96N11 449 aa23.57■■□□□ 1.36
VEGFA-207ENST00000413642 LAT2Q9GZY6 243 aa23.57■■□□□ 1.36
VEGFA-207ENST00000413642 SAP130Q9H0E3 1048 aa23.57■■□□□ 1.36
VEGFA-207ENST00000413642 CLEC4MQ9H2X3 399 aaPredicted RBP23.57■■□□□ 1.36
VEGFA-207ENST00000413642 SDR39U1Q9NRG7 319 aaPredicted RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms