RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 FAM234BA2RU67 622 aa13.32□□□□□ -0.28
LIMS4-201ENST00000413601 KIAA0513O60268 411 aa13.32□□□□□ -0.28
LIMS4-201ENST00000413601 EIF4E2O60573 245 aaKnown RBP13.32□□□□□ -0.28
LIMS4-201ENST00000413601 CYP7B1O75881 506 aa13.32□□□□□ -0.28
LIMS4-201ENST00000413601 H6PDO95479 791 aa13.32□□□□□ -0.28
LIMS4-201ENST00000413601 EIF1AXP47813 144 aaKnown RBP13.32□□□□□ -0.28
LIMS4-201ENST00000413601 CCR4P51679 360 aa13.32□□□□□ -0.28
LIMS4-201ENST00000413601 SUMO3P55854 103 aaPredicted RBP13.32□□□□□ -0.28
LIMS4-201ENST00000413601 KRTAP10-9P60411 292 aa13.32□□□□□ -0.28
LIMS4-201ENST00000413601 RAC1P63000 192 aa13.32□□□□□ -0.28
LIMS4-201ENST00000413601 FOXF1Q12946 379 aa13.32□□□□□ -0.28
LIMS4-201ENST00000413601 MYBPHQ13203 477 aa13.32□□□□□ -0.28
LIMS4-201ENST00000413601 SYPL1Q16563 259 aa13.32□□□□□ -0.28
LIMS4-201ENST00000413601 TIGD2Q4W5G0 525 aa13.32□□□□□ -0.28
LIMS4-201ENST00000413601 FRRS1Q6ZNA5 592 aa13.32□□□□□ -0.28
LIMS4-201ENST00000413601 HMGN2P46Q86SG4 172 aa13.32□□□□□ -0.28
LIMS4-201ENST00000413601 ZNF619Q8N2I2 560 aa13.32□□□□□ -0.28
LIMS4-201ENST00000413601 ANKFN1Q8N957 763 aa13.32□□□□□ -0.28
LIMS4-201ENST00000413601 FBXO27Q8NI29 283 aa13.32□□□□□ -0.28
LIMS4-201ENST00000413601 FNDC9Q8TBE3 224 aa13.32□□□□□ -0.28
LIMS4-201ENST00000413601 RNASE6Q93091 150 aaKnown RBP13.32□□□□□ -0.28
LIMS4-201ENST00000413601 ZG16BQ96DA0 208 aa13.32□□□□□ -0.28
LIMS4-201ENST00000413601 ARSGQ96EG1 525 aa13.32□□□□□ -0.28
LIMS4-201ENST00000413601 LURAP1Q96LR2 239 aa13.32□□□□□ -0.28
LIMS4-201ENST00000413601 CCDC28BQ9BUN5 200 aa13.32□□□□□ -0.28
LIMS4-201ENST00000413601 SAP130Q9H0E3 1048 aa13.32□□□□□ -0.28
LIMS4-201ENST00000413601 ACBD3Q9H3P7 528 aa13.32□□□□□ -0.28
LIMS4-201ENST00000413601 RMND5AQ9H871 391 aa13.32□□□□□ -0.28
LIMS4-201ENST00000413601 POLE3Q9NRF9 147 aa13.32□□□□□ -0.28
LIMS4-201ENST00000413601 KCNN3Q9UGI6 736 aa13.32□□□□□ -0.28
LIMS4-201ENST00000413601 TEX15Q9BXT5 2789 aa13.32□□□□□ -0.28
LIMS4-201ENST00000413601 FBN2P35556 2912 aa13.32□□□□□ -0.28
LIMS4-201ENST00000413601 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.31□□□□□ -0.28
LIMS4-201ENST00000413601 A0A0J9YW62 118 aa13.31□□□□□ -0.28
LIMS4-201ENST00000413601 A0A1W2PNV4 684 aa13.31□□□□□ -0.28
LIMS4-201ENST00000413601 TNFSF11O14788 317 aa13.31□□□□□ -0.28
LIMS4-201ENST00000413601 EFNA2O43921 213 aa13.31□□□□□ -0.28
LIMS4-201ENST00000413601 TNFSF13O75888 250 aa13.31□□□□□ -0.28
LIMS4-201ENST00000413601 ANP32DO95626 131 aa13.31□□□□□ -0.28
LIMS4-201ENST00000413601 KRT75O95678 551 aa13.31□□□□□ -0.28
LIMS4-201ENST00000413601 CSTAP01040 98 aa13.31□□□□□ -0.28
LIMS4-201ENST00000413601 GUSBP08236 651 aa13.31□□□□□ -0.28
LIMS4-201ENST00000413601 UBTFL6P0CB48 400 aaPredicted RBP13.31□□□□□ -0.28
LIMS4-201ENST00000413601 ME2P23368 584 aa13.31□□□□□ -0.28
LIMS4-201ENST00000413601 SFTPDP35247 375 aa13.31□□□□□ -0.28
LIMS4-201ENST00000413601 EIF1P41567 113 aaKnown RBP13.31□□□□□ -0.28
LIMS4-201ENST00000413601 STX1BP61266 288 aa13.31□□□□□ -0.28
LIMS4-201ENST00000413601 HPCAP84074 193 aa13.31□□□□□ -0.28
LIMS4-201ENST00000413601 CHRNEQ04844 493 aa13.31□□□□□ -0.28
LIMS4-201ENST00000413601 SKP2Q13309 424 aa13.31□□□□□ -0.28
LIMS4-201ENST00000413601 FGFBP1Q14512 234 aa13.31□□□□□ -0.28
LIMS4-201ENST00000413601 CTU2Q2VPK5 515 aaKnown RBP13.31□□□□□ -0.28
LIMS4-201ENST00000413601 GTDC1Q4AE62 458 aa13.31□□□□□ -0.28
LIMS4-201ENST00000413601 AP1ARQ63HQ0 302 aa13.31□□□□□ -0.28
LIMS4-201ENST00000413601 OR2A2Q6IF42 318 aa13.31□□□□□ -0.28
LIMS4-201ENST00000413601 PPP4R4Q6NUP7 873 aa13.31□□□□□ -0.28
LIMS4-201ENST00000413601 LUZP2Q86TE4 346 aa13.31□□□□□ -0.28
LIMS4-201ENST00000413601 LILRA2Q8N149 483 aa13.31□□□□□ -0.28
LIMS4-201ENST00000413601 CNEP1R1Q8N9A8 125 aa13.31□□□□□ -0.28
LIMS4-201ENST00000413601 TOR1AIP2Q8NFQ8 470 aa13.31□□□□□ -0.28
LIMS4-201ENST00000413601 OR5W2Q8NH69 310 aa13.31□□□□□ -0.28
LIMS4-201ENST00000413601 OR10D3Q8NH80 312 aa13.31□□□□□ -0.28
LIMS4-201ENST00000413601 ZFP90Q8TF47 636 aa13.31□□□□□ -0.28
LIMS4-201ENST00000413601 THOC1Q96FV9 657 aaKnown RBP13.31□□□□□ -0.28
LIMS4-201ENST00000413601 ITCHQ96J02 903 aa13.31□□□□□ -0.28
LIMS4-201ENST00000413601 ZNF559Q9BR84 538 aa13.31□□□□□ -0.28
LIMS4-201ENST00000413601 THUMPD3Q9BV44 507 aaKnown RBP13.31□□□□□ -0.28
LIMS4-201ENST00000413601 LAT2Q9GZY6 243 aa13.31□□□□□ -0.28
LIMS4-201ENST00000413601 QRSL1Q9H0R6 528 aaKnown RBP13.31□□□□□ -0.28
LIMS4-201ENST00000413601 SLC24A3Q9HC58 644 aa13.31□□□□□ -0.28
LIMS4-201ENST00000413601 MCCC2Q9HCC0 563 aa13.31□□□□□ -0.28
LIMS4-201ENST00000413601 ZNF446Q9NWS9 450 aa13.31□□□□□ -0.28
LIMS4-201ENST00000413601 ZNF175Q9Y473 711 aa13.31□□□□□ -0.28
LIMS4-201ENST00000413601 GPC6Q9Y625 555 aaPredicted RBP13.31□□□□□ -0.28
LIMS4-201ENST00000413601 NOTCH2Q04721 2471 aa13.3□□□□□ -0.28
LIMS4-201ENST00000413601 ADAMDEC1O15204 470 aa13.3□□□□□ -0.28
LIMS4-201ENST00000413601 CXCL13O43927 109 aa13.3□□□□□ -0.28
LIMS4-201ENST00000413601 BCAS1O75363 584 aaPredicted RBP13.3□□□□□ -0.28
LIMS4-201ENST00000413601 AQP8O94778 261 aa13.3□□□□□ -0.28
LIMS4-201ENST00000413601 CHRM4P08173 479 aa13.3□□□□□ -0.28
LIMS4-201ENST00000413601 ZCCHC18P0CG32 403 aa13.3□□□□□ -0.28
LIMS4-201ENST00000413601 PRKCAP17252 672 aa13.3□□□□□ -0.28
LIMS4-201ENST00000413601 SHC1P29353 583 aa13.3□□□□□ -0.28
LIMS4-201ENST00000413601 KIR2DL3P43628 341 aa13.3□□□□□ -0.28
LIMS4-201ENST00000413601 MRPL19P49406 292 aaKnown RBP13.3□□□□□ -0.28
LIMS4-201ENST00000413601 ANXA11P50995 505 aaKnown RBP13.3□□□□□ -0.28
LIMS4-201ENST00000413601 MVDP53602 400 aa13.3□□□□□ -0.28
LIMS4-201ENST00000413601 TXNL4AP83876 142 aaKnown RBP13.3□□□□□ -0.28
LIMS4-201ENST00000413601 CBFBQ13951 182 aa13.3□□□□□ -0.28
LIMS4-201ENST00000413601 QPRTQ15274 297 aa13.3□□□□□ -0.28
LIMS4-201ENST00000413601 C6orf10Q5SRN2 563 aa13.3□□□□□ -0.28
LIMS4-201ENST00000413601 HBMQ6B0K9 141 aa13.3□□□□□ -0.28
LIMS4-201ENST00000413601 VWA1Q6PCB0 445 aa13.3□□□□□ -0.28
LIMS4-201ENST00000413601 SLC2A7Q6PXP3 512 aa13.3□□□□□ -0.28
LIMS4-201ENST00000413601 MSANTD1Q6ZTZ1 278 aa13.3□□□□□ -0.28
LIMS4-201ENST00000413601 ESPNLQ6ZVH7 1005 aa13.3□□□□□ -0.28
LIMS4-201ENST00000413601 EIF3MQ7L2H7 374 aaKnown RBP13.3□□□□□ -0.28
LIMS4-201ENST00000413601 FUNDC1Q8IVP5 155 aa13.3□□□□□ -0.28
LIMS4-201ENST00000413601 ZZZ3Q8IYH5 903 aa13.3□□□□□ -0.28
LIMS4-201ENST00000413601 ATP6V1C2Q8NEY4 427 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms