RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 FRMD7Q6ZUT3 714 aa10.76□□□□□ -0.69
LIMS2-210ENST00000413578 BHLHA15Q7RTS1 189 aaPredicted RBP10.76□□□□□ -0.69
LIMS2-210ENST00000413578 MTERF4Q7Z6M4 381 aaKnown RBP10.76□□□□□ -0.69
LIMS2-210ENST00000413578 SLC43A2Q8N370 569 aa10.76□□□□□ -0.69
LIMS2-210ENST00000413578 CEP112Q8N8E3 955 aa10.76□□□□□ -0.69
LIMS2-210ENST00000413578 ELOA3Q8NG57 546 aa10.76□□□□□ -0.69
LIMS2-210ENST00000413578 FBXO27Q8NI29 283 aa10.76□□□□□ -0.69
LIMS2-210ENST00000413578 ZFP90Q8TF47 636 aa10.76□□□□□ -0.69
LIMS2-210ENST00000413578 ZNF75CPQ92670 426 aaPredicted RBP10.76□□□□□ -0.69
LIMS2-210ENST00000413578 C16orf58Q96GQ5 468 aa10.76□□□□□ -0.69
LIMS2-210ENST00000413578 REXO5Q96IC2 774 aaKnown RBP10.76□□□□□ -0.69
LIMS2-210ENST00000413578 HS6ST2Q96MM7 605 aa10.76□□□□□ -0.69
LIMS2-210ENST00000413578 RRAGDQ9NQL2 400 aaPredicted RBP10.76□□□□□ -0.69
LIMS2-210ENST00000413578 SIRT3Q9NTG7 399 aaPredicted RBP10.76□□□□□ -0.69
LIMS2-210ENST00000413578 ACSS1Q9NUB1 689 aaPredicted RBP10.76□□□□□ -0.69
LIMS2-210ENST00000413578 CDC42EP3Q9UKI2 254 aa10.76□□□□□ -0.69
LIMS2-210ENST00000413578 FREM1Q5H8C1 2179 aa10.76□□□□□ -0.69
LIMS2-210ENST00000413578 PLCE1Q9P212 2302 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 ALPK2Q86TB3 2170 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 EXOC1LA0A1B0GW35 172 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 NPIPB9F8W1W9 429 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 H3BQF6 201 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 SSX4O60224 188 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 LYZL6O75951 148 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 HSPA4LO95757 839 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 FESP07332 822 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 GSTA1P08263 222 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 PRKCAP17252 672 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 SDC1P18827 310 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 SERPINB4P48594 390 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 P2RX1P51575 399 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 PRKAG1P54619 331 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 CDH11P55287 796 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 SUMO3P55854 103 aaPredicted RBP10.75□□□□□ -0.69
LIMS2-210ENST00000413578 RAC3P60763 192 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 IRX1P78414 480 aaPredicted RBP10.75□□□□□ -0.69
LIMS2-210ENST00000413578 CKAP4Q07065 602 aaKnown RBP10.75□□□□□ -0.69
LIMS2-210ENST00000413578 PPA1Q15181 289 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 KRTAP24-1Q3LI83 254 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 TMEM176BQ3YBM2 270 aaPredicted RBP10.75□□□□□ -0.69
LIMS2-210ENST00000413578 KLHL26Q53HC5 615 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 SLC25A53Q5H9E4 307 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 TIMM23BQ5SRD1 257 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.75□□□□□ -0.69
LIMS2-210ENST00000413578 Q6ZSR9 355 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 SSX8Q7RTT4 187 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 C17orf53Q8N3J3 647 aaPredicted RBP10.75□□□□□ -0.69
LIMS2-210ENST00000413578 CCNYL1Q8N7R7 359 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 COX18Q8N8Q8 333 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 OR2T11Q8NH01 316 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 ZFP28Q8NHY6 868 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 GPR119Q8TDV5 335 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 ACMSDQ8TDX5 336 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 FAM120BQ96EK7 910 aaKnown RBP10.75□□□□□ -0.69
LIMS2-210ENST00000413578 OTUB1Q96FW1 271 aaPredicted RBP10.75□□□□□ -0.69
LIMS2-210ENST00000413578 TNFRSF13CQ96RJ3 184 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 STACQ99469 402 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 CCT7Q99832 543 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 RHNO1Q9BSD3 238 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 BTBD2Q9BX70 525 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 ALG2Q9H553 416 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 REEP4Q9H6H4 257 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 L2HGDHQ9H9P8 463 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 DUSP22Q9NRW4 184 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 FAIMQ9NVQ4 179 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 GIN1Q9NXP7 522 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 PRSS50Q9UI38 385 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 PTGDR2Q9Y5Y4 395 aa10.75□□□□□ -0.69
LIMS2-210ENST00000413578 GPC6Q9Y625 555 aaPredicted RBP10.75□□□□□ -0.69
LIMS2-210ENST00000413578 IGHV3-15A0A0B4J1V0 119 aa10.74□□□□□ -0.69
LIMS2-210ENST00000413578 GJE1A6NN92 205 aa10.74□□□□□ -0.69
LIMS2-210ENST00000413578 ESPNB1AK53 854 aa10.74□□□□□ -0.69
LIMS2-210ENST00000413578 ABCD4O14678 606 aa10.74□□□□□ -0.69
LIMS2-210ENST00000413578 SMAD9O15198 467 aaKnown RBP10.74□□□□□ -0.69
LIMS2-210ENST00000413578 CYTIPO60759 359 aa10.74□□□□□ -0.69
LIMS2-210ENST00000413578 SEC22BO75396 215 aa10.74□□□□□ -0.69
LIMS2-210ENST00000413578 ALOX5P09917 674 aa10.74□□□□□ -0.69
LIMS2-210ENST00000413578 HPGDP15428 266 aa10.74□□□□□ -0.69
LIMS2-210ENST00000413578 PTNP21246 168 aa10.74□□□□□ -0.69
LIMS2-210ENST00000413578 IGHV1-2P23083 117 aa10.74□□□□□ -0.69
LIMS2-210ENST00000413578 TTKP33981 857 aa10.74□□□□□ -0.69
LIMS2-210ENST00000413578 GPC1P35052 558 aa10.74□□□□□ -0.69
LIMS2-210ENST00000413578 THBS2P35442 1172 aa10.74□□□□□ -0.69
LIMS2-210ENST00000413578 NAA20P61599 178 aa10.74□□□□□ -0.69
LIMS2-210ENST00000413578 POU6F2P78424 691 aaPredicted RBP10.74□□□□□ -0.69
LIMS2-210ENST00000413578 MLC1Q15049 377 aa10.74□□□□□ -0.69
LIMS2-210ENST00000413578 ZYG11AQ6WRX3 759 aa10.74□□□□□ -0.69
LIMS2-210ENST00000413578 RNF165Q6ZSG1 346 aa10.74□□□□□ -0.69
LIMS2-210ENST00000413578 NOA1Q8NC60 698 aaKnown RBP10.74□□□□□ -0.69
LIMS2-210ENST00000413578 PPCDCQ96CD2 204 aa10.74□□□□□ -0.69
LIMS2-210ENST00000413578 CCDC126Q96EE4 140 aa10.74□□□□□ -0.69
LIMS2-210ENST00000413578 MRGPRX4Q96LA9 322 aa10.74□□□□□ -0.69
LIMS2-210ENST00000413578 IQCGQ9H095 443 aaKnown RBP10.74□□□□□ -0.69
LIMS2-210ENST00000413578 PIGUQ9H490 435 aa10.74□□□□□ -0.69
LIMS2-210ENST00000413578 C1orf109Q9NX04 203 aa10.74□□□□□ -0.69
LIMS2-210ENST00000413578 KLHL9Q9P2J3 617 aa10.74□□□□□ -0.69
LIMS2-210ENST00000413578 CARD8Q9Y2G2 431 aa10.74□□□□□ -0.69
LIMS2-210ENST00000413578 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.74□□□□□ -0.69
LIMS2-210ENST00000413578 FAM234BA2RU67 622 aa10.73□□□□□ -0.69
LIMS2-210ENST00000413578 OR5H1A6NKK0 313 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms