RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 PRR23D1E9PI22 279 aaPredicted RBP16.38■□□□□ 0.21
SDCBP-202ENST00000413219 PRAF2O60831 178 aa16.38■□□□□ 0.21
SDCBP-202ENST00000413219 STX11O75558 287 aa16.38■□□□□ 0.21
SDCBP-202ENST00000413219 PRR23D2P0DMB1 279 aaPredicted RBP16.38■□□□□ 0.21
SDCBP-202ENST00000413219 BMP8BP34820 402 aa16.38■□□□□ 0.21
SDCBP-202ENST00000413219 MAPK14Q16539 360 aa16.38■□□□□ 0.21
SDCBP-202ENST00000413219 C18orf63Q68DL7 685 aa16.38■□□□□ 0.21
SDCBP-202ENST00000413219 BMP8AQ7Z5Y6 402 aa16.38■□□□□ 0.21
SDCBP-202ENST00000413219 RANBP3LQ86VV4 465 aaPredicted RBP16.38■□□□□ 0.21
SDCBP-202ENST00000413219 ADGRG3Q86Y34 549 aa16.38■□□□□ 0.21
SDCBP-202ENST00000413219 ZNF687Q8N1G0 1237 aa16.38■□□□□ 0.21
SDCBP-202ENST00000413219 HDDC3Q8N4P3 179 aa16.38■□□□□ 0.21
SDCBP-202ENST00000413219 RBP7Q96R05 134 aa16.38■□□□□ 0.21
SDCBP-202ENST00000413219 KLHL1Q9NR64 748 aa16.38■□□□□ 0.21
SDCBP-202ENST00000413219 ACSL5Q9ULC5 683 aa16.38■□□□□ 0.21
SDCBP-202ENST00000413219 PRELID1Q9Y255 219 aa16.38■□□□□ 0.21
SDCBP-202ENST00000413219 ZNF780BQ9Y6R6 833 aa16.38■□□□□ 0.21
SDCBP-202ENST00000413219 TBC1D3KA0A087X1G2 549 aa16.37■□□□□ 0.21
SDCBP-202ENST00000413219 EDDM13A0A1B0GTR0 161 aa16.37■□□□□ 0.21
SDCBP-202ENST00000413219 A0A1W2PS29 197 aa16.37■□□□□ 0.21
SDCBP-202ENST00000413219 TBC1D3BA6NDS4 549 aa16.37■□□□□ 0.21
SDCBP-202ENST00000413219 TBC1D3FA6NER0 549 aaPredicted RBP16.37■□□□□ 0.21
SDCBP-202ENST00000413219 ANTXRLA6NF34 631 aa16.37■□□□□ 0.21
SDCBP-202ENST00000413219 TRABD2BA6NFA1 517 aa16.37■□□□□ 0.21
SDCBP-202ENST00000413219 BET1O15155 118 aa16.37■□□□□ 0.21
SDCBP-202ENST00000413219 SSNA1O43805 119 aa16.37■□□□□ 0.21
SDCBP-202ENST00000413219 SBK2P0C263 348 aa16.37■□□□□ 0.21
SDCBP-202ENST00000413219 ZNF250P15622 560 aa16.37■□□□□ 0.21
SDCBP-202ENST00000413219 CCR6P51684 374 aa16.37■□□□□ 0.21
SDCBP-202ENST00000413219 ZNF136P52737 540 aa16.37■□□□□ 0.21
SDCBP-202ENST00000413219 STXBP1P61764 594 aaKnown RBP16.37■□□□□ 0.21
SDCBP-202ENST00000413219 ACTC1P68032 377 aa16.37■□□□□ 0.21
SDCBP-202ENST00000413219 ACTA1P68133 377 aa16.37■□□□□ 0.21
SDCBP-202ENST00000413219 DHCR24Q15392 516 aa16.37■□□□□ 0.21
SDCBP-202ENST00000413219 HNRNPA1L2Q32P51 320 aaKnown RBP16.37■□□□□ 0.21
SDCBP-202ENST00000413219 TBC1D3GQ6DHY5 549 aa16.37■□□□□ 0.21
SDCBP-202ENST00000413219 TMEM65Q6PI78 240 aa16.37■□□□□ 0.21
SDCBP-202ENST00000413219 SEZ6L2Q6UXD5 910 aa16.37■□□□□ 0.21
SDCBP-202ENST00000413219 ZNF836Q6ZNA1 936 aa16.37■□□□□ 0.21
SDCBP-202ENST00000413219 TMCO2Q7Z6W1 182 aaPredicted RBP16.37■□□□□ 0.21
SDCBP-202ENST00000413219 ASPGQ86U10 573 aa16.37■□□□□ 0.21
SDCBP-202ENST00000413219 SLITRK4Q8IW52 837 aa16.37■□□□□ 0.21
SDCBP-202ENST00000413219 C17orf47Q8NEP4 570 aa16.37■□□□□ 0.21
SDCBP-202ENST00000413219 OR6C4Q8NGE1 309 aa16.37■□□□□ 0.21
SDCBP-202ENST00000413219 SMIM4Q8WVI0 70 aa16.37■□□□□ 0.21
SDCBP-202ENST00000413219 PTP4A1Q93096 173 aa16.37■□□□□ 0.21
SDCBP-202ENST00000413219 C4orf36Q96KX1 117 aa16.37■□□□□ 0.21
SDCBP-202ENST00000413219 HCAR1Q9BXC0 346 aa16.37■□□□□ 0.21
SDCBP-202ENST00000413219 RAB11FIP5Q9BXF6 653 aa16.37■□□□□ 0.21
SDCBP-202ENST00000413219 DPH1Q9BZG8 443 aa16.37■□□□□ 0.21
SDCBP-202ENST00000413219 ZNF436Q9C0F3 470 aaPredicted RBP16.37■□□□□ 0.21
SDCBP-202ENST00000413219 HAO2Q9NYQ3 351 aa16.37■□□□□ 0.21
SDCBP-202ENST00000413219 SLC27A6Q9Y2P4 619 aa16.37■□□□□ 0.21
SDCBP-202ENST00000413219 MAB21L2Q9Y586 359 aa16.37■□□□□ 0.21
SDCBP-202ENST00000413219 REM1O75628 298 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 ASGR2P07307 311 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 THBS1P07996 1170 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 C4BPBP20851 252 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 TEAD1P28347 426 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 RAB28P51157 221 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 SRP54P61011 504 aaKnown RBP16.36■□□□□ 0.21
SDCBP-202ENST00000413219 ZNF85Q03923 595 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 SNTB2Q13425 540 aaKnown RBP16.36■□□□□ 0.21
SDCBP-202ENST00000413219 FAM69AQ5T7M9 428 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 MFSD12Q6NUT3 480 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 BMPERQ8N8U9 685 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 UXS1Q8NBZ7 420 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 FAM98AQ8NCA5 519 aaKnown RBP16.36■□□□□ 0.21
SDCBP-202ENST00000413219 C12orf66Q96MD2 445 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 MS4A4EQ96PG1 132 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 ERMAPQ96PL5 475 aaPredicted RBP16.36■□□□□ 0.21
SDCBP-202ENST00000413219 FERD3LQ96RJ6 166 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 TM7SF3Q9NS93 570 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 WDR45Q9Y484 360 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 J3QLW9 94 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 ZNF749O43361 778 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 PEX14O75381 377 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 SNAPC5O75971 98 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 FGF18O76093 207 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 TGM6O95932 706 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 EPXP11678 715 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 ZNF19P17023 458 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 TYRP1P17643 537 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 MAKP20794 623 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 SLC2A5P22732 501 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 LCN1P31025 176 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 ZP1P60852 638 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 RPS7P62081 194 aaKnown RBP16.36■□□□□ 0.21
SDCBP-202ENST00000413219 EEF1A1P68104 462 aaKnown RBP16.36■□□□□ 0.21
SDCBP-202ENST00000413219 FOXK2Q01167 660 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 DUSP8Q13202 625 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 ARHGAP11BQ3KRB8 267 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 GARNL3Q5VVW2 1013 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 NRROSQ86YC3 692 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 OR2L8Q8NGY9 312 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 OR51Q1Q8NH59 317 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 CD99L2Q8TCZ2 262 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 MS4A3Q96HJ5 214 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 ZFP3Q96NJ6 502 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 SARGQ9BW04 601 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms