RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 C8orf59Q8N0T1 100 aaPredicted RBP4.89□□□□□ -1.63
LINC00342-201ENST00000412393 RNF148Q8N7C7 305 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 ANKRD53Q8N9V6 530 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 CHDHQ8NE62 594 aaPredicted RBP4.89□□□□□ -1.63
LINC00342-201ENST00000412393 OR5T3Q8NGG3 340 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 RHEBL1Q8TAI7 183 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 NT5CQ8TCD5 201 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 GRHL3Q8TE85 626 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 UTP15Q8TED0 518 aaKnown RBP4.89□□□□□ -1.63
LINC00342-201ENST00000412393 FAR1Q8WVX9 515 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 HAS2Q92819 552 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 TMEM125Q96AQ2 219 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 VPS33AQ96AX1 596 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 RHBDF1Q96CC6 855 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 ZNF486Q96H40 463 aaPredicted RBP4.89□□□□□ -1.63
LINC00342-201ENST00000412393 REXO5Q96IC2 774 aaKnown RBP4.89□□□□□ -1.63
LINC00342-201ENST00000412393 MAGEB10Q96LZ2 347 aaPredicted RBP4.89□□□□□ -1.63
LINC00342-201ENST00000412393 MUS81Q96NY9 551 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 OR1F2PQ96R84 312 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 ZNF300Q96RE9 604 aaPredicted RBP4.89□□□□□ -1.63
LINC00342-201ENST00000412393 MNTQ99583 582 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 LPAR4Q99677 370 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 BARD1Q99728 777 aaKnown RBP4.89□□□□□ -1.63
LINC00342-201ENST00000412393 SLC39A3Q9BRY0 314 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 MLST8Q9BVC4 326 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 UGT2B28Q9BY64 529 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 BRINP2Q9C0B6 783 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 DERL2Q9GZP9 239 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 SLIRPQ9GZT3 109 aaKnown RBP4.89□□□□□ -1.63
LINC00342-201ENST00000412393 NAA50Q9GZZ1 169 aaKnown RBP4.89□□□□□ -1.63
LINC00342-201ENST00000412393 GSTO2Q9H4Y5 243 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 ARMC7Q9H6L4 198 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 CAB39LQ9H9S4 337 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 DIABLOQ9NR28 239 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 LANCL2Q9NS86 450 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 FKBP14Q9NWM8 211 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 FAM118AQ9NWS6 357 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 CMTM6Q9NX76 183 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 WWOXQ9NZC7 414 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 RABL2AQ9UBK7 228 aaPredicted RBP4.89□□□□□ -1.63
LINC00342-201ENST00000412393 DAPK2Q9UIK4 370 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 OSGIN1Q9UJX0 560 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 EIF3LQ9Y262 564 aaKnown RBP4.89□□□□□ -1.63
LINC00342-201ENST00000412393 TRAPPC4Q9Y296 219 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 WBP11Q9Y2W2 641 aaKnown RBP4.89□□□□□ -1.63
LINC00342-201ENST00000412393 NOX1Q9Y5S8 564 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 GPR45Q9Y5Y3 372 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 RELNP78509 3460 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 COL12A1Q99715 3063 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 USP9YO00507 2555 aaPredicted RBP4.88□□□□□ -1.63
LINC00342-201ENST00000412393 SPENQ96T58 3664 aaKnown RBP4.88□□□□□ -1.63
LINC00342-201ENST00000412393 OR5H15A6NDH6 313 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 ANKDD1BA6NHY2 528 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 MAGEB17A8MXT2 336 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 ZNF99A8MXY4 864 aaPredicted RBP4.88□□□□□ -1.63
LINC00342-201ENST00000412393 J3QRK9 145 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 E2F3O00716 465 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 EI24O14681 340 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 ARPC2O15144 300 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 TAPBPO15533 448 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 SEC14L5O43304 696 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 B4GALT2O60909 372 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 FAM20BO75063 409 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 CDC123O75794 336 aaPredicted RBP4.88□□□□□ -1.63
LINC00342-201ENST00000412393 UPK1BO75841 260 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 DDAH2O95865 285 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 WDPCPO95876 746 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 S100BP04271 92 aaPredicted RBP4.88□□□□□ -1.63
LINC00342-201ENST00000412393 RNF224P0DH78 156 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 SMIM10L1P0DMW3 83 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 RAP2AP10114 183 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 THRBP10828 461 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 RNH1P13489 461 aaKnown RBP4.88□□□□□ -1.63
LINC00342-201ENST00000412393 CD1DP15813 335 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 SLC6A12P48065 614 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 HSPA7P48741 367 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 GSK3BP49841 420 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 OR4D2P58180 307 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 STX1BP61266 288 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 STXBP1P61764 594 aaKnown RBP4.88□□□□□ -1.63
LINC00342-201ENST00000412393 IRF9Q00978 393 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 RHAGQ02094 409 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 ZNF33BQ06732 778 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 FOXD4Q12950 439 aaPredicted RBP4.88□□□□□ -1.63
LINC00342-201ENST00000412393 AQP6Q13520 282 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 ABRAXAS2Q15018 415 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 NSDHLQ15738 373 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 EXT1Q16394 746 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 CDKL4Q5MAI5 379 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 FCRLBQ6BAA4 426 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 NXNQ6DKJ4 435 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 SULT1C3Q6IMI6 304 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 LAIR2Q6ISS4 152 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 H3F3CQ6NXT2 135 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 TMIGD1Q6UXZ0 262 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 KRT78Q8N1N4 520 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 MIER2Q8N344 545 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 TCAIMQ8N3R3 496 aa4.88□□□□□ -1.63
LINC00342-201ENST00000412393 ZCCHC7Q8N3Z6 543 aaKnown RBP4.88□□□□□ -1.63
LINC00342-201ENST00000412393 SPATA6LQ8N4H0 392 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms