RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 MVKQ03426 396 aa12.97□□□□□ -0.33
LIMS2-206ENST00000409754 EMX1Q04741 257 aaPredicted RBP12.97□□□□□ -0.33
LIMS2-206ENST00000409754 ZFP36L1Q07352 338 aaKnown RBP12.97□□□□□ -0.33
LIMS2-206ENST00000409754 IL11RAQ14626 422 aa12.97□□□□□ -0.33
LIMS2-206ENST00000409754 TMEM201Q5SNT2 666 aa12.97□□□□□ -0.33
LIMS2-206ENST00000409754 KIF18BQ86Y91 864 aa12.97□□□□□ -0.33
LIMS2-206ENST00000409754 CLVS1Q8IUQ0 354 aaPredicted RBP12.97□□□□□ -0.33
LIMS2-206ENST00000409754 LSMEM1Q8N8F7 131 aa12.97□□□□□ -0.33
LIMS2-206ENST00000409754 OR8J1Q8NGP2 316 aa12.97□□□□□ -0.33
LIMS2-206ENST00000409754 ZNF420Q8TAQ5 688 aaPredicted RBP12.97□□□□□ -0.33
LIMS2-206ENST00000409754 MYDGFQ969H8 173 aa12.97□□□□□ -0.33
LIMS2-206ENST00000409754 NMD3Q96D46 503 aaKnown RBP12.97□□□□□ -0.33
LIMS2-206ENST00000409754 FAM46AQ96IP4 442 aaKnown RBP12.97□□□□□ -0.33
LIMS2-206ENST00000409754 RHNO1Q9BSD3 238 aa12.97□□□□□ -0.33
LIMS2-206ENST00000409754 TRIM2Q9C040 744 aa12.97□□□□□ -0.33
LIMS2-206ENST00000409754 NXF5Q9H1B4 397 aaKnown RBP12.97□□□□□ -0.33
LIMS2-206ENST00000409754 OCIAD1Q9NX40 245 aa12.97□□□□□ -0.33
LIMS2-206ENST00000409754 PTTG2Q9NZH5 202 aa12.97□□□□□ -0.33
LIMS2-206ENST00000409754 CNIH4Q9P003 139 aa12.97□□□□□ -0.33
LIMS2-206ENST00000409754 COPS7AQ9UBW8 275 aa12.97□□□□□ -0.33
LIMS2-206ENST00000409754 CFAP47Q6ZTR5 3102 aa12.97□□□□□ -0.33
LIMS2-206ENST00000409754 A0A0B4J2E0 115 aa12.96□□□□□ -0.33
LIMS2-206ENST00000409754 C2orf92A0A1B0GVN3 265 aa12.96□□□□□ -0.33
LIMS2-206ENST00000409754 A0A1B0GX12 115 aa12.96□□□□□ -0.33
LIMS2-206ENST00000409754 EFCAB7A8K855 629 aa12.96□□□□□ -0.33
LIMS2-206ENST00000409754 M0R129 80 aa12.96□□□□□ -0.33
LIMS2-206ENST00000409754 TO15178 435 aa12.96□□□□□ -0.33
LIMS2-206ENST00000409754 NTN1O95631 604 aa12.96□□□□□ -0.33
LIMS2-206ENST00000409754 ADRB1P08588 477 aa12.96□□□□□ -0.33
LIMS2-206ENST00000409754 SMSP52788 366 aa12.96□□□□□ -0.33
LIMS2-206ENST00000409754 GINS1Q14691 196 aa12.96□□□□□ -0.33
LIMS2-206ENST00000409754 EBPQ15125 230 aaKnown RBP12.96□□□□□ -0.33
LIMS2-206ENST00000409754 KLHL26Q53HC5 615 aa12.96□□□□□ -0.33
LIMS2-206ENST00000409754 B3GNT6Q6ZMB0 384 aa12.96□□□□□ -0.33
LIMS2-206ENST00000409754 AHSA2Q719I0 299 aa12.96□□□□□ -0.33
LIMS2-206ENST00000409754 OVCH1Q7RTY7 1134 aa12.96□□□□□ -0.33
LIMS2-206ENST00000409754 CLDN22Q8N7P3 220 aa12.96□□□□□ -0.33
LIMS2-206ENST00000409754 POGLUT1Q8NBL1 392 aa12.96□□□□□ -0.33
LIMS2-206ENST00000409754 OR4C3Q8NH37 302 aa12.96□□□□□ -0.33
LIMS2-206ENST00000409754 TEX47Q8TBZ9 253 aa12.96□□□□□ -0.33
LIMS2-206ENST00000409754 FAR1Q8WVX9 515 aa12.96□□□□□ -0.33
LIMS2-206ENST00000409754 TMEM239Q8WW34 195 aa12.96□□□□□ -0.33
LIMS2-206ENST00000409754 GGHQ92820 318 aa12.96□□□□□ -0.33
LIMS2-206ENST00000409754 HS6ST2Q96MM7 605 aa12.96□□□□□ -0.33
LIMS2-206ENST00000409754 Q96MT0 163 aa12.96□□□□□ -0.33
LIMS2-206ENST00000409754 COPS4Q9BT78 406 aa12.96□□□□□ -0.33
LIMS2-206ENST00000409754 POLDIP3Q9BY77 421 aaKnown RBP12.96□□□□□ -0.33
LIMS2-206ENST00000409754 LHPPQ9H008 270 aa12.96□□□□□ -0.33
LIMS2-206ENST00000409754 UBQLN4Q9NRR5 601 aa12.96□□□□□ -0.33
LIMS2-206ENST00000409754 ZNF223Q9UK11 482 aaPredicted RBP12.96□□□□□ -0.33
LIMS2-206ENST00000409754 SLC35A3Q9Y2D2 325 aa12.96□□□□□ -0.33
LIMS2-206ENST00000409754 ZFHX4Q86UP3 3567 aa12.96□□□□□ -0.33
LIMS2-206ENST00000409754 VSTM2BA6NLU5 285 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 ZNF99A8MXY4 864 aaPredicted RBP12.95□□□□□ -0.34
LIMS2-206ENST00000409754 AGRPO00253 132 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 CHP2O43745 196 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 PIP5K1CO60331 668 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 CSTAP01040 98 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 HEXBP07686 556 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 ADH7P40394 386 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 FOXC1Q12948 553 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 CAMK2BQ13554 666 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 SLC25A30Q5SVS4 291 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 HLA-DQA1Q5Y7H0 255 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 WDR88Q6ZMY6 472 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 LANCL3Q6ZV70 420 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 TMPRSS7Q7RTY8 843 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 MRGPREQ86SM8 312 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 C9orf40Q8IXQ3 194 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 ZNF440Q8IYI8 595 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 ZNF527Q8NB42 609 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 AGBL5Q8NDL9 886 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 WDR36Q8NI36 951 aaKnown RBP12.95□□□□□ -0.34
LIMS2-206ENST00000409754 OSTF1Q92882 214 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 EFHD2Q96C19 240 aaPredicted RBP12.95□□□□□ -0.34
LIMS2-206ENST00000409754 ISOC1Q96CN7 298 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 LMF1Q96S06 567 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 DOK1Q99704 481 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 PLA2G12AQ9BZM1 189 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 DSN1Q9H410 356 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 APMAPQ9HDC9 416 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 CNOT2Q9NZN8 540 aaKnown RBP12.95□□□□□ -0.34
LIMS2-206ENST00000409754 FLRT3Q9NZU0 649 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 A0A1B0GWA3 101 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 EFCAB10A6NFE3 127 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 IDSB3KWA1 339 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 ADAM11O75078 769 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 ALOX12BO75342 701 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 MT-CO3P00414 261 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 CDK1P06493 297 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 CYC1P08574 325 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 PAX7P23759 505 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 GPR4P46093 362 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 MASP1P48740 699 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 PCYT1AP49585 367 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 GPR143P51810 404 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 NUDT6P53370 316 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 SH3BGRP55822 239 aaPredicted RBP12.95□□□□□ -0.34
LIMS2-206ENST00000409754 PSPHP78330 225 aa12.95□□□□□ -0.34
LIMS2-206ENST00000409754 PRKCDQ05655 676 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms