RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 NUDCD3Q8IVD9 361 aa13.18□□□□□ -0.3
CBX3-203ENST00000409747 KIRREL3Q8IZU9 778 aa13.18□□□□□ -0.3
CBX3-203ENST00000409747 TOR1AIP2Q8NFQ8 470 aa13.18□□□□□ -0.3
CBX3-203ENST00000409747 RNF128Q8TEB7 428 aa13.18□□□□□ -0.3
CBX3-203ENST00000409747 ARL8AQ96BM9 186 aa13.18□□□□□ -0.3
CBX3-203ENST00000409747 MRGPRX4Q96LA9 322 aa13.18□□□□□ -0.3
CBX3-203ENST00000409747 TMEM109Q9BVC6 243 aa13.18□□□□□ -0.3
CBX3-203ENST00000409747 GP6Q9HCN6 339 aa13.18□□□□□ -0.3
CBX3-203ENST00000409747 ICAM5Q9UMF0 924 aa13.18□□□□□ -0.3
CBX3-203ENST00000409747 CARD8Q9Y2G2 431 aa13.18□□□□□ -0.3
CBX3-203ENST00000409747 GPR52Q9Y2T5 361 aa13.18□□□□□ -0.3
CBX3-203ENST00000409747 INHBBP09529 407 aa13.17□□□□□ -0.3
CBX3-203ENST00000409747 G6PDP11413 515 aa13.17□□□□□ -0.3
CBX3-203ENST00000409747 ETV4P43268 484 aa13.17□□□□□ -0.3
CBX3-203ENST00000409747 CLDN8P56748 225 aa13.17□□□□□ -0.3
CBX3-203ENST00000409747 HBA1P69905 142 aa13.17□□□□□ -0.3
CBX3-203ENST00000409747 WDR93Q6P2C0 686 aa13.17□□□□□ -0.3
CBX3-203ENST00000409747 PRSS57Q6UWY2 283 aa13.17□□□□□ -0.3
CBX3-203ENST00000409747 ZNF614Q8N883 585 aa13.17□□□□□ -0.3
CBX3-203ENST00000409747 FBXO27Q8NI29 283 aa13.17□□□□□ -0.3
CBX3-203ENST00000409747 OR7D2Q96RA2 312 aa13.17□□□□□ -0.3
CBX3-203ENST00000409747 TACO1Q9BSH4 297 aaKnown RBP13.17□□□□□ -0.3
CBX3-203ENST00000409747 GSX1Q9H4S2 264 aaPredicted RBP13.17□□□□□ -0.3
CBX3-203ENST00000409747 NPIPA5A0A0B4J1W7 369 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 NPIPA7E9PJI5 369 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 NPIPB9F8W1W9 429 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 ZNF195O14628 629 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 ZNF264O43296 627 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 EIF4E2O60573 245 aaKnown RBP13.16□□□□□ -0.3
CBX3-203ENST00000409747 NPIPA8P0DM63 369 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 UBL4AP11441 157 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 PSMB1P20618 241 aaKnown RBP13.16□□□□□ -0.3
CBX3-203ENST00000409747 SELENBP1Q13228 472 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 CBFBQ13951 182 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 PGS1Q32NB8 556 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.16□□□□□ -0.3
CBX3-203ENST00000409747 CBLN3Q6UW01 205 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 TMCO5AQ8N6Q1 288 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 OR5AK3PQ8NH89 298 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 ZFP90Q8TF47 636 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 HS3ST6Q96QI5 342 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 HDHD5Q9BXW7 423 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 ACTR6Q9GZN1 396 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 NMUR2Q9GZQ4 415 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 C12orf49Q9H741 205 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 KLHL13Q9P2N7 655 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 PCDHGB4Q9UN71 923 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.16□□□□□ -0.3
CBX3-203ENST00000409747 RNASET2O00584 256 aaKnown RBP13.16□□□□□ -0.3
CBX3-203ENST00000409747 AGR2O95994 175 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 SERPINE1P05121 402 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 THBDP07204 575 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 MYZAPP0CAP1 466 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 CREB1P16220 341 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 PRKCAP17252 672 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 MATN1P21941 496 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 LOXP28300 417 aaPredicted RBP13.16□□□□□ -0.3
CBX3-203ENST00000409747 SLC7A1P30825 629 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 CCR4P51679 360 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 KRT71Q3SY84 523 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 SLC43A2Q8N370 569 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 MREGQ8N565 214 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 STEAP2Q8NFT2 490 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 OR5D16Q8NGK9 328 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 OR5W2Q8NH69 310 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 GPR119Q8TDV5 335 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 ARSGQ96EG1 525 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 SDF2Q99470 211 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 KLHDC3Q9BQ90 382 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 ZNF395Q9H8N7 513 aaPredicted RBP13.16□□□□□ -0.3
CBX3-203ENST00000409747 EXD2Q9NVH0 621 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 KCNE3Q9Y6H6 103 aa13.16□□□□□ -0.3
CBX3-203ENST00000409747 RAI1Q7Z5J4 1906 aaPredicted RBP13.15□□□□□ -0.3
CBX3-203ENST00000409747 RNF103-CHMP3A0A140T963 221 aa13.15□□□□□ -0.3
CBX3-203ENST00000409747 BIRC5O15392 142 aa13.15□□□□□ -0.3
CBX3-203ENST00000409747 RGS16O15492 202 aaPredicted RBP13.15□□□□□ -0.3
CBX3-203ENST00000409747 TMCC2O75069 709 aa13.15□□□□□ -0.3
CBX3-203ENST00000409747 STX11O75558 287 aa13.15□□□□□ -0.3
CBX3-203ENST00000409747 PRKD3O94806 890 aa13.15□□□□□ -0.3
CBX3-203ENST00000409747 NID1P14543 1247 aa13.15□□□□□ -0.3
CBX3-203ENST00000409747 HOXB4P17483 251 aaPredicted RBP13.15□□□□□ -0.3
CBX3-203ENST00000409747 SHC1P29353 583 aa13.15□□□□□ -0.3
CBX3-203ENST00000409747 PDCD2Q16342 344 aaPredicted RBP13.15□□□□□ -0.3
CBX3-203ENST00000409747 TMEM176BQ3YBM2 270 aaPredicted RBP13.15□□□□□ -0.3
CBX3-203ENST00000409747 SLC25A53Q5H9E4 307 aa13.15□□□□□ -0.3
CBX3-203ENST00000409747 C3orf33Q6P1S2 294 aa13.15□□□□□ -0.3
CBX3-203ENST00000409747 ZNF704Q6ZNC4 412 aaPredicted RBP13.15□□□□□ -0.3
CBX3-203ENST00000409747 C22orf34Q6ZV56 151 aa13.15□□□□□ -0.3
CBX3-203ENST00000409747 PLEKHM3Q6ZWE6 761 aa13.15□□□□□ -0.3
CBX3-203ENST00000409747 FCRLAQ7L513 359 aa13.15□□□□□ -0.3
CBX3-203ENST00000409747 VPS37AQ8NEZ2 397 aa13.15□□□□□ -0.3
CBX3-203ENST00000409747 OR8J2Q8NGG1 315 aa13.15□□□□□ -0.3
CBX3-203ENST00000409747 RFWD2Q8NHY2 731 aa13.15□□□□□ -0.3
CBX3-203ENST00000409747 ABHD3Q8WU67 409 aa13.15□□□□□ -0.3
CBX3-203ENST00000409747 OIT3Q8WWZ8 545 aa13.15□□□□□ -0.3
CBX3-203ENST00000409747 ROBO4Q8WZ75 1007 aa13.15□□□□□ -0.3
CBX3-203ENST00000409747 SLC35G5Q96KT7 338 aa13.15□□□□□ -0.3
CBX3-203ENST00000409747 USB1Q9BQ65 265 aaKnown RBP13.15□□□□□ -0.3
CBX3-203ENST00000409747 SRXN1Q9BYN0 137 aa13.15□□□□□ -0.3
CBX3-203ENST00000409747 SSU72Q9NP77 194 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms