RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 A8MVJ9 347 aa12.46□□□□□ -0.41
COL6A2-204ENST00000409416 E9PQ18 207 aa12.46□□□□□ -0.41
COL6A2-204ENST00000409416 H3BUI4 141 aa12.46□□□□□ -0.41
COL6A2-204ENST00000409416 PRODHO43272 600 aa12.46□□□□□ -0.41
COL6A2-204ENST00000409416 PRKACAP17612 351 aa12.46□□□□□ -0.41
COL6A2-204ENST00000409416 TRIM23P36406 574 aa12.46□□□□□ -0.41
COL6A2-204ENST00000409416 IFNGR2P38484 337 aa12.46□□□□□ -0.41
COL6A2-204ENST00000409416 ETV6P41212 452 aa12.46□□□□□ -0.41
COL6A2-204ENST00000409416 FLYWCH1Q4VC44 716 aa12.46□□□□□ -0.41
COL6A2-204ENST00000409416 XKRXQ6PP77 449 aa12.46□□□□□ -0.41
COL6A2-204ENST00000409416 FAM3CQ92520 227 aa12.46□□□□□ -0.41
COL6A2-204ENST00000409416 PRRC1Q96M27 445 aa12.46□□□□□ -0.41
COL6A2-204ENST00000409416 ELF4Q99607 663 aaPredicted RBP12.46□□□□□ -0.41
COL6A2-204ENST00000409416 MICU1Q9BPX6 476 aa12.46□□□□□ -0.41
COL6A2-204ENST00000409416 SRA1Q9HD15 236 aaKnown RBP12.46□□□□□ -0.41
COL6A2-204ENST00000409416 ACSL5Q9ULC5 683 aa12.46□□□□□ -0.41
COL6A2-204ENST00000409416 DSPPQ9NZW4 1301 aa12.46□□□□□ -0.41
COL6A2-204ENST00000409416 C12orf71A8MTZ7 269 aa12.46□□□□□ -0.41
COL6A2-204ENST00000409416 HRKO00198 91 aa12.46□□□□□ -0.41
COL6A2-204ENST00000409416 POLR1CO15160 346 aaPredicted RBP12.46□□□□□ -0.41
COL6A2-204ENST00000409416 TPPPO94811 219 aa12.46□□□□□ -0.41
COL6A2-204ENST00000409416 IL1AP01583 271 aa12.46□□□□□ -0.41
COL6A2-204ENST00000409416 YES1P07947 543 aa12.46□□□□□ -0.41
COL6A2-204ENST00000409416 MAOAP21397 527 aa12.46□□□□□ -0.41
COL6A2-204ENST00000409416 C5AR1P21730 350 aa12.46□□□□□ -0.41
COL6A2-204ENST00000409416 PTGS2P35354 604 aa12.46□□□□□ -0.41
COL6A2-204ENST00000409416 ANXA11P50995 505 aaKnown RBP12.46□□□□□ -0.41
COL6A2-204ENST00000409416 TP53I3Q53FA7 332 aa12.46□□□□□ -0.41
COL6A2-204ENST00000409416 MZT2BQ6NZ67 158 aa12.46□□□□□ -0.41
COL6A2-204ENST00000409416 GDPGP1Q6ZNW5 385 aa12.46□□□□□ -0.41
COL6A2-204ENST00000409416 TTLL10Q6ZVT0 673 aa12.46□□□□□ -0.41
COL6A2-204ENST00000409416 NOXA1Q86UR1 476 aa12.46□□□□□ -0.41
COL6A2-204ENST00000409416 FAM26EQ8N5C1 309 aa12.46□□□□□ -0.41
COL6A2-204ENST00000409416 YIPF7Q8N8F6 280 aa12.46□□□□□ -0.41
COL6A2-204ENST00000409416 IL17RCQ8NAC3 791 aa12.46□□□□□ -0.41
COL6A2-204ENST00000409416 SUN3Q8TAQ9 357 aa12.46□□□□□ -0.41
COL6A2-204ENST00000409416 TMEM163Q8TC26 289 aa12.46□□□□□ -0.41
COL6A2-204ENST00000409416 SLC7A6Q92536 515 aa12.46□□□□□ -0.41
COL6A2-204ENST00000409416 IKZF2Q9UKS7 526 aa12.46□□□□□ -0.41
COL6A2-204ENST00000409416 A0A1W2PRQ8 180 aa12.46□□□□□ -0.42
COL6A2-204ENST00000409416 UBXN7O94888 489 aa12.46□□□□□ -0.42
COL6A2-204ENST00000409416 ACP2P11117 423 aa12.46□□□□□ -0.42
COL6A2-204ENST00000409416 CLDN12P56749 244 aa12.46□□□□□ -0.42
COL6A2-204ENST00000409416 PCBP4P57723 403 aaKnown RBP12.46□□□□□ -0.42
COL6A2-204ENST00000409416 PLK5Q496M5 336 aa12.46□□□□□ -0.42
COL6A2-204ENST00000409416 OR2L5Q8NG80 312 aa12.46□□□□□ -0.42
COL6A2-204ENST00000409416 SETD6Q8TBK2 473 aa12.46□□□□□ -0.42
COL6A2-204ENST00000409416 CHAC2Q8WUX2 184 aa12.46□□□□□ -0.42
COL6A2-204ENST00000409416 SLC35A4Q96G79 324 aa12.46□□□□□ -0.42
COL6A2-204ENST00000409416 TOE1Q96GM8 510 aaKnown RBP12.46□□□□□ -0.42
COL6A2-204ENST00000409416 SLC38A3Q99624 504 aa12.46□□□□□ -0.42
COL6A2-204ENST00000409416 MAN2C1Q9NTJ4 1040 aa12.46□□□□□ -0.42
COL6A2-204ENST00000409416 DHCR7Q9UBM7 475 aaKnown RBP12.46□□□□□ -0.42
COL6A2-204ENST00000409416 TNFRSF10DQ9UBN6 386 aa12.46□□□□□ -0.42
COL6A2-204ENST00000409416 GPR34Q9UPC5 381 aa12.46□□□□□ -0.42
COL6A2-204ENST00000409416 CACNA1HO95180 2353 aa12.45□□□□□ -0.42
COL6A2-204ENST00000409416 HMX3A6NHT5 357 aa12.45□□□□□ -0.42
COL6A2-204ENST00000409416 GTPBP1O00178 669 aaKnown RBP12.45□□□□□ -0.42
COL6A2-204ENST00000409416 SLC1A3P43003 542 aa12.45□□□□□ -0.42
COL6A2-204ENST00000409416 BTG2P78543 158 aa12.45□□□□□ -0.42
COL6A2-204ENST00000409416 TRAM2Q15035 370 aa12.45□□□□□ -0.42
COL6A2-204ENST00000409416 CDK10Q15131 360 aa12.45□□□□□ -0.42
COL6A2-204ENST00000409416 OCLNQ16625 522 aa12.45□□□□□ -0.42
COL6A2-204ENST00000409416 PRPF38BQ5VTL8 546 aaKnown RBP12.45□□□□□ -0.42
COL6A2-204ENST00000409416 CSNK1A1LQ8N752 337 aa12.45□□□□□ -0.42
COL6A2-204ENST00000409416 APOBEC4Q8WW27 367 aaKnown RBP12.45□□□□□ -0.42
COL6A2-204ENST00000409416 SLC41A3Q96GZ6 507 aa12.45□□□□□ -0.42
COL6A2-204ENST00000409416 EXTL2Q9UBQ6 330 aa12.45□□□□□ -0.42
COL6A2-204ENST00000409416 HSPB11Q9Y547 144 aa12.45□□□□□ -0.42
COL6A2-204ENST00000409416 IMPA2O14732 288 aa12.45□□□□□ -0.42
COL6A2-204ENST00000409416 FGF17O60258 216 aa12.45□□□□□ -0.42
COL6A2-204ENST00000409416 TOXO94900 526 aa12.45□□□□□ -0.42
COL6A2-204ENST00000409416 THEGLP0DJG4 465 aa12.45□□□□□ -0.42
COL6A2-204ENST00000409416 CPEP16870 476 aa12.45□□□□□ -0.42
COL6A2-204ENST00000409416 HTRA4P83105 476 aaPredicted RBP12.45□□□□□ -0.42
COL6A2-204ENST00000409416 BTBD16Q32M84 506 aa12.45□□□□□ -0.42
COL6A2-204ENST00000409416 MRPL2Q5T653 305 aaKnown RBP12.45□□□□□ -0.42
COL6A2-204ENST00000409416 TIGD4Q8IY51 512 aa12.45□□□□□ -0.42
COL6A2-204ENST00000409416 LRRC25Q8N386 305 aaPredicted RBP12.45□□□□□ -0.42
COL6A2-204ENST00000409416 ZNF563Q8TA94 476 aa12.45□□□□□ -0.42
COL6A2-204ENST00000409416 WDR92Q96MX6 357 aa12.45□□□□□ -0.42
COL6A2-204ENST00000409416 ENKD1Q9H0I2 346 aa12.45□□□□□ -0.42
COL6A2-204ENST00000409416 EPHX3Q9H6B9 360 aa12.45□□□□□ -0.42
COL6A2-204ENST00000409416 STMN3Q9NZ72 180 aa12.45□□□□□ -0.42
COL6A2-204ENST00000409416 FBXL21Q9UKT6 434 aa12.45□□□□□ -0.42
COL6A2-204ENST00000409416 ALG5Q9Y673 324 aa12.45□□□□□ -0.42
COL6A2-204ENST00000409416 ARRDC5A6NEK1 342 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 EMC8O43402 210 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 NDUFV2P19404 249 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 COX10Q12887 443 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 RUNX2Q13950 521 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 SIGIRRQ6IA17 410 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 TMEM92Q6UXU6 159 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 ZAR1Q86SH2 424 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 KLHL36Q8N4N3 616 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 BEST4Q8NFU0 473 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 GNPDA2Q8TDQ7 276 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 TSSK2Q96PF2 358 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 LMF1Q96S06 567 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 ISG20L2Q9H9L3 353 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms