RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 LRRTM4Q86VH4 590 aa11.92□□□□□ -0.5
HERC3-203ENST00000407637 SCN4BQ8IWT1 228 aa11.92□□□□□ -0.5
HERC3-203ENST00000407637 SKA3Q8IX90 412 aa11.92□□□□□ -0.5
HERC3-203ENST00000407637 NLGN1Q8N2Q7 840 aa11.92□□□□□ -0.5
HERC3-203ENST00000407637 WDSUB1Q8N9V3 476 aa11.92□□□□□ -0.5
HERC3-203ENST00000407637 KLHDC9Q8NEP7 349 aa11.92□□□□□ -0.5
HERC3-203ENST00000407637 MNTQ99583 582 aa11.92□□□□□ -0.5
HERC3-203ENST00000407637 TCEAL7Q9BRU2 100 aa11.92□□□□□ -0.5
HERC3-203ENST00000407637 FAM117AQ9C073 453 aa11.92□□□□□ -0.5
HERC3-203ENST00000407637 CACYBPQ9HB71 228 aaKnown RBP11.92□□□□□ -0.5
HERC3-203ENST00000407637 MAN2C1Q9NTJ4 1040 aa11.92□□□□□ -0.5
HERC3-203ENST00000407637 ACSS1Q9NUB1 689 aaPredicted RBP11.92□□□□□ -0.5
HERC3-203ENST00000407637 PLXND1Q9Y4D7 1925 aa11.92□□□□□ -0.5
HERC3-203ENST00000407637 DRGXA6NNA5 263 aa11.92□□□□□ -0.5
HERC3-203ENST00000407637 GFYI3L273 518 aa11.92□□□□□ -0.5
HERC3-203ENST00000407637 CTDSPLO15194 276 aa11.92□□□□□ -0.5
HERC3-203ENST00000407637 RAD1O60671 282 aa11.92□□□□□ -0.5
HERC3-203ENST00000407637 CLN5O75503 358 aa11.92□□□□□ -0.5
HERC3-203ENST00000407637 PAK4O96013 591 aaPredicted RBP11.92□□□□□ -0.5
HERC3-203ENST00000407637 TIA1P31483 386 aaKnown RBP eCLIP11.92□□□□□ -0.5
HERC3-203ENST00000407637 RNF144AP50876 292 aaPredicted RBP11.92□□□□□ -0.5
HERC3-203ENST00000407637 PRSS53Q2L4Q9 553 aa11.92□□□□□ -0.5
HERC3-203ENST00000407637 HMGN2P46Q86SG4 172 aa11.92□□□□□ -0.5
HERC3-203ENST00000407637 LGALS14Q8TCE9 139 aa11.92□□□□□ -0.5
HERC3-203ENST00000407637 RAB8BQ92930 207 aa11.92□□□□□ -0.5
HERC3-203ENST00000407637 RFKQ969G6 155 aa11.92□□□□□ -0.5
HERC3-203ENST00000407637 ZDHHC12Q96GR4 267 aa11.92□□□□□ -0.5
HERC3-203ENST00000407637 TMEM41AQ96HV5 264 aa11.92□□□□□ -0.5
HERC3-203ENST00000407637 TOX2Q96NM4 488 aa11.92□□□□□ -0.5
HERC3-203ENST00000407637 ALG8Q9BVK2 526 aa11.92□□□□□ -0.5
HERC3-203ENST00000407637 FNDC11Q9BVV2 318 aa11.92□□□□□ -0.5
HERC3-203ENST00000407637 REEP4Q9H6H4 257 aa11.92□□□□□ -0.5
HERC3-203ENST00000407637 FBXL3Q9UKT7 428 aa11.92□□□□□ -0.5
HERC3-203ENST00000407637 ACAD8Q9UKU7 415 aa11.92□□□□□ -0.5
HERC3-203ENST00000407637 PPP2R3BQ9Y5P8 575 aa11.92□□□□□ -0.5
HERC3-203ENST00000407637 PLXNB3Q9ULL4 1909 aa11.92□□□□□ -0.5
HERC3-203ENST00000407637 TRIP12Q14669 1992 aaPredicted RBP11.92□□□□□ -0.5
HERC3-203ENST00000407637 UBE2QL1A1L167 161 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 PYCARD-AS1I3L0S3 204 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 OR2T1O43869 369 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 FMO6PO60774 539 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 SC5DO75845 299 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 IL5P05113 134 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 CD63P08962 238 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 SAGP10523 405 aaPredicted RBP11.91□□□□□ -0.5
HERC3-203ENST00000407637 DDX6P26196 483 aaKnown RBP eCLIP11.91□□□□□ -0.5
HERC3-203ENST00000407637 CSNK1DP48730 415 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 DEFA6Q01524 100 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 PTSQ03393 145 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 RPE65Q16518 533 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 CSRP2Q16527 193 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 RNF212Q495C1 297 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 AADACL4Q5VUY2 407 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 TMEM71Q6P5X7 295 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 CXXC5Q7LFL8 322 aaKnown RBP11.91□□□□□ -0.5
HERC3-203ENST00000407637 LSRQ86X29 649 aaPredicted RBP11.91□□□□□ -0.5
HERC3-203ENST00000407637 DCUN1D3Q8IWE4 304 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 ZSCAN1Q8NBB4 408 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 OR5W2Q8NH69 310 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 TMEM185BQ9H7F4 350 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 SPG21Q9NZD8 308 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 CNIH4Q9P003 139 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 EXOGQ9Y2C4 368 aaKnown RBP11.91□□□□□ -0.5
HERC3-203ENST00000407637 BRWD3Q6RI45 1802 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 A0A1B0GTQ1 180 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 NAP1L6A6NFF2 107 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 ITGA10O75578 1167 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 SLC2A10O95528 541 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 NTN1O95631 604 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 ACTL6AO96019 429 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 PTHLHP12272 177 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 ACRV1P26436 265 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 DCTDP32321 178 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 STAT5AP42229 794 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 SMIM11AP58511 58 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 TUSC3Q13454 348 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 PEA15Q15121 130 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 ENTPD8Q5MY95 495 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 TAPT1Q6NXT6 567 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 C1orf94Q6P1W5 598 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 C11orf88Q6PI97 169 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 BAIAP2L2Q6UXY1 529 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 CMTM4Q8IZR5 234 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 MORN4Q8NDC4 146 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 C17orf47Q8NEP4 570 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 OR5D16Q8NGK9 328 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 OR6K2Q8NGY2 324 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 ZFPM2Q8WW38 1151 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 PPCDCQ96CD2 204 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 ZNF354BQ96LW1 612 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 TMEM231Q9H6L2 316 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 SGK2Q9HBY8 427 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 ZDHHC4Q9NPG8 344 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 UFSP2Q9NUQ7 469 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 CRLS1Q9UJA2 301 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 ATXN7L1Q9ULK2 861 aaPredicted RBP11.91□□□□□ -0.5
HERC3-203ENST00000407637 MOKQ9UQ07 419 aa11.91□□□□□ -0.5
HERC3-203ENST00000407637 CARHSP1Q9Y2V2 147 aaKnown RBP11.91□□□□□ -0.5
HERC3-203ENST00000407637 TMEM272A0A1B0GTI8 110 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 A0A1W2PRQ8 180 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms