RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 TGM3Q08188 693 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 KLF9Q13886 244 aaPredicted RBP13.01□□□□□ -0.33
APOB-202ENST00000399256 FAM46CQ5VWP2 391 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 MBOAT2Q6ZWT7 520 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 HMGB4Q8WW32 186 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 ST8SIA4Q92187 359 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 ELMOD3Q96FG2 381 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 KLHL31Q9H511 634 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 EPHX3Q9H6B9 360 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 CARNS1A5YM72 827 aa13□□□□□ -0.33
APOB-202ENST00000399256 SYNDIG1LA6NDD5 238 aa13□□□□□ -0.33
APOB-202ENST00000399256 SYT5O00445 386 aa13□□□□□ -0.33
APOB-202ENST00000399256 PEX14O75381 377 aa13□□□□□ -0.33
APOB-202ENST00000399256 TFP02787 698 aa13□□□□□ -0.33
APOB-202ENST00000399256 TYRP14679 529 aa13□□□□□ -0.33
APOB-202ENST00000399256 POU3F2P20265 443 aaPredicted RBP13□□□□□ -0.33
APOB-202ENST00000399256 ZP3P21754 424 aa13□□□□□ -0.33
APOB-202ENST00000399256 GDNFP39905 211 aa13□□□□□ -0.33
APOB-202ENST00000399256 ANXA11P50995 505 aaKnown RBP13□□□□□ -0.33
APOB-202ENST00000399256 TUSC1Q2TAM9 212 aa13□□□□□ -0.33
APOB-202ENST00000399256 HSD17B12Q53GQ0 312 aa13□□□□□ -0.33
APOB-202ENST00000399256 C9orf64Q5T6V5 341 aa13□□□□□ -0.33
APOB-202ENST00000399256 GJD3Q8N144 294 aa13□□□□□ -0.33
APOB-202ENST00000399256 PAWRQ96IZ0 340 aaKnown RBP13□□□□□ -0.33
APOB-202ENST00000399256 RADILQ96JH8 1075 aa13□□□□□ -0.33
APOB-202ENST00000399256 REG4Q9BYZ8 158 aa13□□□□□ -0.33
APOB-202ENST00000399256 OR52D1Q9H346 318 aa13□□□□□ -0.33
APOB-202ENST00000399256 PELI2Q9HAT8 420 aa13□□□□□ -0.33
APOB-202ENST00000399256 IRAK3Q9Y616 596 aa13□□□□□ -0.33
APOB-202ENST00000399256 NPTNQ9Y639 398 aa13□□□□□ -0.33
APOB-202ENST00000399256 GOLGA4Q13439 2230 aaKnown RBP13□□□□□ -0.33
APOB-202ENST00000399256 A0A0A6YYD5 115 aa13□□□□□ -0.33
APOB-202ENST00000399256 MAN2B1O00754 1011 aa13□□□□□ -0.33
APOB-202ENST00000399256 PLPP2O43688 288 aa13□□□□□ -0.33
APOB-202ENST00000399256 NUP62P37198 522 aaPredicted RBP13□□□□□ -0.33
APOB-202ENST00000399256 SIM1P81133 766 aaPredicted RBP13□□□□□ -0.33
APOB-202ENST00000399256 REEP5Q00765 189 aa13□□□□□ -0.33
APOB-202ENST00000399256 AGERQ15109 404 aa13□□□□□ -0.33
APOB-202ENST00000399256 TMEM255AQ5JRV8 349 aa13□□□□□ -0.33
APOB-202ENST00000399256 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13□□□□□ -0.335e-28■■□□□ 12.6
APOB-202ENST00000399256 OR6M1Q8NGM8 313 aa13□□□□□ -0.33
APOB-202ENST00000399256 OR5J2Q8NH18 312 aa13□□□□□ -0.33
APOB-202ENST00000399256 FANK1Q8TC84 345 aa13□□□□□ -0.33
APOB-202ENST00000399256 TFGQ92734 400 aaPredicted RBP13□□□□□ -0.33
APOB-202ENST00000399256 KISS1RQ969F8 398 aaPredicted RBP13□□□□□ -0.33
APOB-202ENST00000399256 CNRIP1Q96F85 164 aaPredicted RBP13□□□□□ -0.33
APOB-202ENST00000399256 SEC22CQ9BRL7 303 aa13□□□□□ -0.33
APOB-202ENST00000399256 AICDAQ9GZX7 198 aa13□□□□□ -0.33
APOB-202ENST00000399256 OR52A5Q9H2C5 316 aa13□□□□□ -0.33
APOB-202ENST00000399256 RCE1Q9Y256 329 aa13□□□□□ -0.33
APOB-202ENST00000399256 TCF20Q9UGU0 1960 aaKnown RBP13□□□□□ -0.33
APOB-202ENST00000399256 TSPAN11A1L157 253 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 ZIC2O95409 532 aaPredicted RBP12.99□□□□□ -0.33
APOB-202ENST00000399256 CLUP10909 449 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 CXCL2P19875 107 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 MC3RP41968 323 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 C3P1Q6ZMU1 363 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 CFAP77Q6ZQR2 320 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 OR11G2Q8NGC1 345 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 MOSPD2Q8NHP6 518 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 MRGPRX3Q96LB0 322 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 WDR26Q9H7D7 661 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 KLHL28Q9NXS3 571 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 MGAT4CQ9UBM8 478 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 KIF25Q9UIL4 384 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 CDHR4A6H8M9 788 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 MAGEB4O15481 346 aaPredicted RBP12.99□□□□□ -0.33
APOB-202ENST00000399256 ADRB1P08588 477 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 SYN1P17600 705 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 PYCR1P32322 319 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 RAG2P55895 527 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 PRPF38BQ5VTL8 546 aaKnown RBP12.99□□□□□ -0.33
APOB-202ENST00000399256 SLC22A10Q63ZE4 541 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 TMCO2Q7Z6W1 182 aaPredicted RBP12.99□□□□□ -0.33
APOB-202ENST00000399256 PXKQ7Z7A4 578 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 DCUN1D3Q8IWE4 304 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 OR2L2Q8NH16 312 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 HAVCR2Q8TDQ0 301 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 GHSRQ92847 366 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 WDR89Q96FK6 387 aaPredicted RBP12.99□□□□□ -0.33
APOB-202ENST00000399256 PGLYRP3Q96LB9 341 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 DPEP2Q9H4A9 486 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 KIAA1549LQ6ZVL6 1849 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 CXorf51AA0A1B0GTR3 108 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 LGALS8O00214 317 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 PROS1P07225 676 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 PDX1P52945 283 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 FXYD6P3P58550 94 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 BAMBIQ13145 260 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 NHLRC3Q5JS37 347 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 SFRP5Q5T4F7 317 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 LINGO2Q7L985 606 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 SLITRK4Q8IW52 837 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 CMIPQ8IY22 773 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 GANCQ8TET4 914 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 FBXW5Q969U6 566 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 NUS1Q96E22 293 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 ACTR6Q9GZN1 396 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 WASH6PQ9NQA3 447 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 CA10Q9NS85 328 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms