RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 P2RX1P51575 399 aa11.26□□□□□ -0.61
HLA-DQB1-203ENST00000399082 DUSP7Q16829 419 aa11.26□□□□□ -0.61
HLA-DQB1-203ENST00000399082 TMEM44Q2T9K0 475 aa11.26□□□□□ -0.61
HLA-DQB1-203ENST00000399082 PLPPR5Q32ZL2 321 aa11.26□□□□□ -0.61
HLA-DQB1-203ENST00000399082 ZNF311Q5JNZ3 666 aa11.26□□□□□ -0.61
HLA-DQB1-203ENST00000399082 WIPI1Q5MNZ9 446 aaPredicted RBP11.26□□□□□ -0.61
HLA-DQB1-203ENST00000399082 TRILQ7L0X0 811 aa11.26□□□□□ -0.61
HLA-DQB1-203ENST00000399082 GRAMD2AQ8IUY3 354 aa11.26□□□□□ -0.61
HLA-DQB1-203ENST00000399082 SLC30A8Q8IWU4 369 aa11.26□□□□□ -0.61
HLA-DQB1-203ENST00000399082 CMIPQ8IY22 773 aa11.26□□□□□ -0.61
HLA-DQB1-203ENST00000399082 OR5W2Q8NH69 310 aa11.26□□□□□ -0.61
HLA-DQB1-203ENST00000399082 POC1BQ8TC44 478 aa11.26□□□□□ -0.61
HLA-DQB1-203ENST00000399082 GPR119Q8TDV5 335 aa11.26□□□□□ -0.61
HLA-DQB1-203ENST00000399082 ACKR4Q9NPB9 350 aa11.26□□□□□ -0.61
HLA-DQB1-203ENST00000399082 EXOSC3Q9NQT5 275 aaKnown RBP11.26□□□□□ -0.61
HLA-DQB1-203ENST00000399082 MED17Q9NVC6 651 aa11.26□□□□□ -0.61
HLA-DQB1-203ENST00000399082 NDE1Q9NXR1 346 aa11.26□□□□□ -0.61
HLA-DQB1-203ENST00000399082 SPRR3Q9UBC9 169 aa11.26□□□□□ -0.61
HLA-DQB1-203ENST00000399082 B4GALT7Q9UBV7 327 aa11.26□□□□□ -0.61
HLA-DQB1-203ENST00000399082 IFT52Q9Y366 437 aa11.26□□□□□ -0.61
HLA-DQB1-203ENST00000399082 NBASA2RRP1 2371 aa11.25□□□□□ -0.61
HLA-DQB1-203ENST00000399082 A0A1B0GVC2 190 aa11.25□□□□□ -0.61
HLA-DQB1-203ENST00000399082 GTPBP1O00178 669 aaKnown RBP11.25□□□□□ -0.61
HLA-DQB1-203ENST00000399082 ETV2O00321 342 aaPredicted RBP11.25□□□□□ -0.61
HLA-DQB1-203ENST00000399082 CXCR6O00574 342 aa11.25□□□□□ -0.61
HLA-DQB1-203ENST00000399082 CDC40O60508 579 aaKnown RBP eCLIP11.25□□□□□ -0.61
HLA-DQB1-203ENST00000399082 CYP7B1O75881 506 aa11.25□□□□□ -0.61
HLA-DQB1-203ENST00000399082 PDE9AO76083 593 aa11.25□□□□□ -0.61
HLA-DQB1-203ENST00000399082 LINGO3P0C6S8 592 aa11.25□□□□□ -0.61
HLA-DQB1-203ENST00000399082 NCK1P16333 377 aa11.25□□□□□ -0.61
HLA-DQB1-203ENST00000399082 GGT1P19440 569 aa11.25□□□□□ -0.61
HLA-DQB1-203ENST00000399082 TCEA1P23193 301 aaKnown RBP11.25□□□□□ -0.61
HLA-DQB1-203ENST00000399082 PSMA4P25789 261 aaKnown RBP11.25□□□□□ -0.61
HLA-DQB1-203ENST00000399082 DPP4P27487 766 aa11.25□□□□□ -0.61
HLA-DQB1-203ENST00000399082 MSX1P28360 303 aa11.25□□□□□ -0.61
HLA-DQB1-203ENST00000399082 KDELR2P33947 212 aa11.25□□□□□ -0.61
HLA-DQB1-203ENST00000399082 ACAA2P42765 397 aaKnown RBP11.25□□□□□ -0.61
HLA-DQB1-203ENST00000399082 KCNJ5P48544 419 aa11.25□□□□□ -0.61
HLA-DQB1-203ENST00000399082 ZNF136P52737 540 aa11.25□□□□□ -0.61
HLA-DQB1-203ENST00000399082 SUMO3P55854 103 aaPredicted RBP11.25□□□□□ -0.61
HLA-DQB1-203ENST00000399082 GFRA1P56159 465 aa11.25□□□□□ -0.61
HLA-DQB1-203ENST00000399082 DSCR4P56555 118 aaPredicted RBP11.25□□□□□ -0.61
HLA-DQB1-203ENST00000399082 LSM11P83369 360 aaKnown RBP eCLIP11.25□□□□□ -0.61
HLA-DQB1-203ENST00000399082 SLC10A1Q14973 349 aa11.25□□□□□ -0.61
HLA-DQB1-203ENST00000399082 SAMD4BQ5PRF9 694 aaKnown RBP11.25□□□□□ -0.61
HLA-DQB1-203ENST00000399082 DCST1Q5T197 706 aa11.25□□□□□ -0.61
HLA-DQB1-203ENST00000399082 PRICKLE2Q7Z3G6 844 aa11.25□□□□□ -0.61
HLA-DQB1-203ENST00000399082 PATL1Q86TB9 770 aaKnown RBP11.25□□□□□ -0.61
HLA-DQB1-203ENST00000399082 KRT73Q86Y46 540 aa11.25□□□□□ -0.61
HLA-DQB1-203ENST00000399082 SMYD1Q8NB12 490 aa11.25□□□□□ -0.61
HLA-DQB1-203ENST00000399082 OR4D11Q8NGI4 311 aa11.25□□□□□ -0.61
HLA-DQB1-203ENST00000399082 CLPTM1LQ96KA5 538 aa11.25□□□□□ -0.61
HLA-DQB1-203ENST00000399082 ZNF607Q96SK3 696 aa11.25□□□□□ -0.61
HLA-DQB1-203ENST00000399082 KCTD14Q9BQ13 255 aaPredicted RBP11.25□□□□□ -0.61
HLA-DQB1-203ENST00000399082 PCDHAC1Q9H158 963 aa11.25□□□□□ -0.61
HLA-DQB1-203ENST00000399082 AGPAT4Q9NRZ5 378 aa11.25□□□□□ -0.61
HLA-DQB1-203ENST00000399082 TNFRSF10DQ9UBN6 386 aa11.25□□□□□ -0.61
HLA-DQB1-203ENST00000399082 EGFL7Q9UHF1 273 aa11.25□□□□□ -0.61
HLA-DQB1-203ENST00000399082 SLC6A5Q9Y345 797 aa11.25□□□□□ -0.61
HLA-DQB1-203ENST00000399082 MRPS18CQ9Y3D5 142 aaKnown RBP11.25□□□□□ -0.61
HLA-DQB1-203ENST00000399082 ZGRF1Q86YA3 2104 aa11.24□□□□□ -0.61
HLA-DQB1-203ENST00000399082 A0A1B0GTH9 108 aa11.24□□□□□ -0.61
HLA-DQB1-203ENST00000399082 TPST2O60704 377 aa11.24□□□□□ -0.61
HLA-DQB1-203ENST00000399082 TRAPPC6AO75865 159 aa11.24□□□□□ -0.61
HLA-DQB1-203ENST00000399082 PDE5AO76074 875 aa11.24□□□□□ -0.61
HLA-DQB1-203ENST00000399082 NTN1O95631 604 aa11.24□□□□□ -0.61
HLA-DQB1-203ENST00000399082 GKN3PP0CG01 181 aa11.24□□□□□ -0.61
HLA-DQB1-203ENST00000399082 EDN3P14138 238 aa11.24□□□□□ -0.61
HLA-DQB1-203ENST00000399082 HK1P19367 917 aa11.24□□□□□ -0.61
HLA-DQB1-203ENST00000399082 TCN1P20061 433 aaPredicted RBP11.24□□□□□ -0.61
HLA-DQB1-203ENST00000399082 DLX5P56178 289 aa11.24□□□□□ -0.61
HLA-DQB1-203ENST00000399082 NCALDP61601 193 aa11.24□□□□□ -0.61
HLA-DQB1-203ENST00000399082 HOXC5Q00444 222 aa11.24□□□□□ -0.61
HLA-DQB1-203ENST00000399082 EPS8Q12929 822 aa11.24□□□□□ -0.61
HLA-DQB1-203ENST00000399082 FOXF1Q12946 379 aa11.24□□□□□ -0.61
HLA-DQB1-203ENST00000399082 GANABQ14697 944 aaKnown RBP11.24□□□□□ -0.61
HLA-DQB1-203ENST00000399082 LARS2Q15031 903 aaKnown RBP11.24□□□□□ -0.61
HLA-DQB1-203ENST00000399082 QPRTQ15274 297 aa11.24□□□□□ -0.61
HLA-DQB1-203ENST00000399082 NPTX1Q15818 432 aa11.24□□□□□ -0.61
HLA-DQB1-203ENST00000399082 IGFBP7Q16270 282 aa11.24□□□□□ -0.61
HLA-DQB1-203ENST00000399082 NRF1Q16656 503 aa11.24□□□□□ -0.61
HLA-DQB1-203ENST00000399082 INTS11Q5TA45 600 aaKnown RBP11.24□□□□□ -0.61
HLA-DQB1-203ENST00000399082 ARMC8Q8IUR7 673 aa11.24□□□□□ -0.61
HLA-DQB1-203ENST00000399082 LACC1Q8IV20 430 aa11.24□□□□□ -0.61
HLA-DQB1-203ENST00000399082 TMCO5AQ8N6Q1 288 aa11.24□□□□□ -0.61
HLA-DQB1-203ENST00000399082 TOR1AIP2Q8NFQ8 470 aa11.24□□□□□ -0.61
HLA-DQB1-203ENST00000399082 OR5M1Q8NGP8 315 aa11.24□□□□□ -0.61
HLA-DQB1-203ENST00000399082 NEIL3Q8TAT5 605 aa11.24□□□□□ -0.61
HLA-DQB1-203ENST00000399082 FIG4Q92562 907 aa11.24□□□□□ -0.61
HLA-DQB1-203ENST00000399082 ARHGDIGQ99819 225 aa11.24□□□□□ -0.61
HLA-DQB1-203ENST00000399082 SPATA5L1Q9BVQ7 753 aa11.24□□□□□ -0.61
HLA-DQB1-203ENST00000399082 PINK1Q9BXM7 581 aa11.24□□□□□ -0.61
HLA-DQB1-203ENST00000399082 TAS2R10Q9NYW0 307 aa11.24□□□□□ -0.61
HLA-DQB1-203ENST00000399082 SEC14L3Q9UDX4 400 aa11.24□□□□□ -0.61
HLA-DQB1-203ENST00000399082 DKKL1Q9UK85 242 aa11.24□□□□□ -0.61
HLA-DQB1-203ENST00000399082 VDAC3Q9Y277 283 aa11.24□□□□□ -0.61
HLA-DQB1-203ENST00000399082 RPH3AQ9Y2J0 694 aaPredicted RBP11.24□□□□□ -0.61
HLA-DQB1-203ENST00000399082 TRGV5A0A0B4J1U4 118 aa11.23□□□□□ -0.61
HLA-DQB1-203ENST00000399082 OR2M5A3KFT3 312 aa11.23□□□□□ -0.61
HLA-DQB1-203ENST00000399082 C7orf72A4D263 438 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms